| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
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The map label for this gene is 78044547
Identifier: 78044547
GI number: 78044547
Start: 393263
End: 393853
Strand: Direct
Name: 78044547
Synonym: CHY_0447
Alternate gene names: NA
Gene position: 393263-393853 (Clockwise)
Preceding gene: 78045146
Following gene: 78043273
Centisome position: 16.38
GC content: 41.12
Gene sequence:
>591_bases ATGAAAGCTCCCCTGATGCCTGATTTTGTCAATAAAATGGAACTTTTTCTGCAAATAGAGCTAAAAGAAAAGATGGGAAG GCTATTTATCTTTTTGGTTTTGCTGTTTGTGCCCGGTTTTTCCGTTAAAACTATAGCCATATTTTTCTTAAGCGCCTCAA TGCTGCCGGCGGATATCAAAAACCGGCGGGATGAAGCTTTATATTTTCTACCCTTTTCCCGCAAAGAGCTCTACCTCTAT AACTTGGGATTTTTACTTTTGCTGGTTTTAGTTTCCTCGATTATAACCCAGGCCCTTTGGCCAACAACCATTGCCGAAAA AGGAATGTTCATCATAAAAAGCATTAACTTTACTTTGGCCATGTTCGGGGTGGTCATGCTTTGCGTTTCCCAGGGCTTAG ATAATATCGGTTGGCCGTTTATTATCGTCTTGCTGGATGCCCTCTTAGGAAGTATTGGCAGGGCGTCAATTAACCCTTAT AACTGGATTAGCTTTACCAATCAGGGCAATATCCCCTTTGCTTTTGTATTTGCGGCGATAATTTGCTTTGCTGGCTATTG GATATATCTGAAAAATGGTGGTGAGCTCTAA
Upstream 100 bases:
>100_bases GAGGAGATAATTAAAACAGTAAAGGATTGCATTCAAAAAATAAAGGCTTTAGGAATAGATTTTTATACCATTATGCTGAT TTTTGAGGAGGTATGGAAAA
Downstream 100 bases:
>100_bases ATGGTTTTAGAAGTAAAAAACTTAAGCAAGCAGATTAGAGGCAAGCAGATTTTAAGCAATGTCTCGTTTAGCTTGGAAAA AGGTGAGGTTTTAGCGTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 196; Mature: 196
Protein sequence:
>196_residues MKAPLMPDFVNKMELFLQIELKEKMGRLFIFLVLLFVPGFSVKTIAIFFLSASMLPADIKNRRDEALYFLPFSRKELYLY NLGFLLLLVLVSSIITQALWPTTIAEKGMFIIKSINFTLAMFGVVMLCVSQGLDNIGWPFIIVLLDALLGSIGRASINPY NWISFTNQGNIPFAFVFAAIICFAGYWIYLKNGGEL
Sequences:
>Translated_196_residues MKAPLMPDFVNKMELFLQIELKEKMGRLFIFLVLLFVPGFSVKTIAIFFLSASMLPADIKNRRDEALYFLPFSRKELYLY NLGFLLLLVLVSSIITQALWPTTIAEKGMFIIKSINFTLAMFGVVMLCVSQGLDNIGWPFIIVLLDALLGSIGRASINPY NWISFTNQGNIPFAFVFAAIICFAGYWIYLKNGGEL >Mature_196_residues MKAPLMPDFVNKMELFLQIELKEKMGRLFIFLVLLFVPGFSVKTIAIFFLSASMLPADIKNRRDEALYFLPFSRKELYLY NLGFLLLLVLVSSIITQALWPTTIAEKGMFIIKSINFTLAMFGVVMLCVSQGLDNIGWPFIIVLLDALLGSIGRASINPY NWISFTNQGNIPFAFVFAAIICFAGYWIYLKNGGEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22174; Mature: 22174
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAPLMPDFVNKMELFLQIELKEKMGRLFIFLVLLFVPGFSVKTIAIFFLSASMLPADIK CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHH NRRDEALYFLPFSRKELYLYNLGFLLLLVLVSSIITQALWPTTIAEKGMFIIKSINFTLA CCCCCEEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHCCEEEEHHHHHHHH MFGVVMLCVSQGLDNIGWPFIIVLLDALLGSIGRASINPYNWISFTNQGNIPFAFVFAAI HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCHHHHHHHHH ICFAGYWIYLKNGGEL HHHCCEEEEECCCCCC >Mature Secondary Structure MKAPLMPDFVNKMELFLQIELKEKMGRLFIFLVLLFVPGFSVKTIAIFFLSASMLPADIK CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHH NRRDEALYFLPFSRKELYLYNLGFLLLLVLVSSIITQALWPTTIAEKGMFIIKSINFTLA CCCCCEEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHCCEEEEHHHHHHHH MFGVVMLCVSQGLDNIGWPFIIVLLDALLGSIGRASINPYNWISFTNQGNIPFAFVFAAI HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCHHHHHHHHH ICFAGYWIYLKNGGEL HHHCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA