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The map label for this gene is 78045146

Identifier: 78045146

GI number: 78045146

Start: 392914

End: 393285

Strand: Direct

Name: 78045146

Synonym: CHY_0446

Alternate gene names: NA

Gene position: 392914-393285 (Clockwise)

Preceding gene: 78043254

Following gene: 78044547

Centisome position: 16.36

GC content: 40.05

Gene sequence:

>372_bases
ATGTTAAGAAAGGTTGATAAACACAGCGGTATCCCGGCATATATCCAAATTGGCAATATGATCAAAGCAGAGATAATTCT
GGGCAATCTCCCCCAGGGGGCCCAGCTCCCACCGGTGAGGGATTTGCAATATATCTTTGATGTAAACATCAATACCGTGC
TAAAAGCCTTAGACAAACTTAAAAACGAAGGCTTTATCGAGGCCGAACAGGGAGTGGGGTATTTTGTAAAAAAGGATATC
AGCGTTGAGGAGGAGATAATTAAAACAGTAAAGGATTGCATTCAAAAAATAAAGGCTTTAGGAATAGATTTTTATACCAT
TATGCTGATTTTTGAGGAGGTATGGAAAAATGAAAGCTCCCCTGATGCCTGA

Upstream 100 bases:

>100_bases
AACTTAATTCCCTGGCGGGGAATATTACTTTAAAAAATTTAGACGGAGTGGTTCTTGAGCATTCTGGTTTTACAAAAATT
AACAGAGAGTGATGGTGAAG

Downstream 100 bases:

>100_bases
TTTTGTCAATAAAATGGAACTTTTTCTGCAAATAGAGCTAAAAGAAAAGATGGGAAGGCTATTTATCTTTTTGGTTTTGC
TGTTTGTGCCCGGTTTTTCC

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: GntR Family Transcriptional Regulator; Regulatory Protein GntR HTH; Transcriptional Regulator

Number of amino acids: Translated: 123; Mature: 123

Protein sequence:

>123_residues
MLRKVDKHSGIPAYIQIGNMIKAEIILGNLPQGAQLPPVRDLQYIFDVNINTVLKALDKLKNEGFIEAEQGVGYFVKKDI
SVEEEIIKTVKDCIQKIKALGIDFYTIMLIFEEVWKNESSPDA

Sequences:

>Translated_123_residues
MLRKVDKHSGIPAYIQIGNMIKAEIILGNLPQGAQLPPVRDLQYIFDVNINTVLKALDKLKNEGFIEAEQGVGYFVKKDI
SVEEEIIKTVKDCIQKIKALGIDFYTIMLIFEEVWKNESSPDA
>Mature_123_residues
MLRKVDKHSGIPAYIQIGNMIKAEIILGNLPQGAQLPPVRDLQYIFDVNINTVLKALDKLKNEGFIEAEQGVGYFVKKDI
SVEEEIIKTVKDCIQKIKALGIDFYTIMLIFEEVWKNESSPDA

Specific function: Unknown

COG id: COG1725

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13909; Mature: 13909

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRKVDKHSGIPAYIQIGNMIKAEIILGNLPQGAQLPPVRDLQYIFDVNINTVLKALDKL
CCCCCCCCCCCCCEEECCCHHEEHEEECCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHH
KNEGFIEAEQGVGYFVKKDISVEEEIIKTVKDCIQKIKALGIDFYTIMLIFEEVWKNESS
HCCCCEECCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCC
PDA
CCC
>Mature Secondary Structure
MLRKVDKHSGIPAYIQIGNMIKAEIILGNLPQGAQLPPVRDLQYIFDVNINTVLKALDKL
CCCCCCCCCCCCCEEECCCHHEEHEEECCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHH
KNEGFIEAEQGVGYFVKKDISVEEEIIKTVKDCIQKIKALGIDFYTIMLIFEEVWKNESS
HCCCCEECCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCC
PDA
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA