Definition Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome.
Accession NC_007503
Length 2,401,520

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The map label for this gene is pilM [C]

Identifier: 78043775

GI number: 78043775

Start: 552407

End: 553438

Strand: Direct

Name: pilM [C]

Synonym: CHY_0639

Alternate gene names: 78043775

Gene position: 552407-553438 (Clockwise)

Preceding gene: 78044930

Following gene: 78044456

Centisome position: 23.0

GC content: 41.86

Gene sequence:

>1032_bases
ATGGGGAAAAACCGGTATATTTTAGCTTTTGACGCGGGAGTGCGGTATTTTAAAGCTGTTTTACTTAAAGCTGACAAAAA
GCAGCCGGAATTATTAAAAACGGTAACTTATCAGATGCCAGTGGAATTTCAGGAGAATACGGTTCGGGATTATATTCCCA
AATATTTGCTGGCAGCCAAAAAAGAATTTAACATAGGAAAGGCTAAAGTTATAACTACTCTTCCCGGCAATAAAATTATT
TCCCGCATCATCAAAGTTCCTTTAATGAACCAAAAAGAGTTAAATGCCTATCTTGACTTAGAAGCAGAGCAGTATTTACC
AGTTCCCGTTAAAGATAGCGTTTTGGCTTCGGTAATTTTGGAAAATGCCGAGGCGGATGATGGAACCAAACAGATGAACG
TTTTACTTTCCGCCGCTTCCCGGGAAATTATTATGGATCTTTACGATACGGTGGTTTCTACGGGCTTAAACTTGGATGTG
ATTGATCTTCCTTTTCTGGCTTTATACCGGGGAGTTTTTTCCCAAATAAATCCGGAAGTGCCGGTGGCGGTAGTGGATAT
TGGTGCTGGTAATACCCTGTTAATTATCGTTAAAGACGGAATTTTAAAATTTGTCCGTTCAATTAAATGGGGGGCCAATG
CCATCACCCAGATGATTGCAACCAATATGAACCTTGACTTTGTCAAAGCGGAACAACTAAAGGAAGAGAAGGGTGAGCTT
TTGGCGGCAGATGAGCAGGTGGTTGATCAGGAAAAATTAACTATTGATATAAGCATTCGCCAGGCAATATCAGAACTTAT
TAACGAAATCCGCCGCAGTATAGATTTTTACCGTACCCAGGAGCGGGGGAATAACGTTGAGCGAATTTTAATTACCGGAG
GAGGGAGTAAGTTAAAAGGACTAACCGAACTTTTTGAAAGCCAGCTTGACCTTGAAACCTTTACCTTTGCCCCGATGGTG
GAGGAAAAACTTGACCCGGCTTTTACTTTAGCCTACGGCCTGGGACTCTGGGGGGTGGAAAGGGATGTATAA

Upstream 100 bases:

>100_bases
AAATAAAAGTAGTGAAATTAAAATATTAGAGTGGAAAGAGCTTTACCAAGTTTTTTAGAAAAGGATGGAGGGCTAAGTGC
AAAGTTTTATCGGGAAATTT

Downstream 100 bases:

>100_bases
AGCTAACCTCCTTCCCCCGGAACTACAAAAAGATGTCGAAATTAACACGAAAAAACTTGCCATTTTGGCGGGGATTACTG
CTTTAGTTACCATTATAATC

Product: type IV pilus assembly protein PilM

Products: NA

Alternate protein names: Type IV Pilus Biogenesis Protein PilM; Tfp Pilus Assembly Protein ATPase PilM; Protein FtsA; Type Iv Pilus Assembly Protein Pilm; Type 4 Fimbrial Biogenesis Protein PilM; Fimbrial Assembly Protein PilM; Type IV Pilus Assembly Protein; Fimbrial Assembly Membrane Protein; Fimbrial Assembly Protein; General Secretion Pathway Protein L; Response Regulator Receiver Domain Protein; Response Regulator Receiver Domain-Containing Protein; Fimbrial Assembly Family Protein; Tfp Pilus Assembly Protein ATPase PilM-Like Protein Protein; Actin-Like ATPase Involved In; Type IV Pilus Biogenesis Protein TapM; Pilus-Associated Protein PilM; Tfp Pilus Assembly Protein ATPase PilM-Like Protein; Type 4 Fimbrial Biogenesis Protein; Tfp Pilus Assembly Protein; Pili Assembly Protein; Competence Protein PilM; Type IV Pilus Biogenesis ATPase PilM

Number of amino acids: Translated: 343; Mature: 342

Protein sequence:

>343_residues
MGKNRYILAFDAGVRYFKAVLLKADKKQPELLKTVTYQMPVEFQENTVRDYIPKYLLAAKKEFNIGKAKVITTLPGNKII
SRIIKVPLMNQKELNAYLDLEAEQYLPVPVKDSVLASVILENAEADDGTKQMNVLLSAASREIIMDLYDTVVSTGLNLDV
IDLPFLALYRGVFSQINPEVPVAVVDIGAGNTLLIIVKDGILKFVRSIKWGANAITQMIATNMNLDFVKAEQLKEEKGEL
LAADEQVVDQEKLTIDISIRQAISELINEIRRSIDFYRTQERGNNVERILITGGGSKLKGLTELFESQLDLETFTFAPMV
EEKLDPAFTLAYGLGLWGVERDV

Sequences:

>Translated_343_residues
MGKNRYILAFDAGVRYFKAVLLKADKKQPELLKTVTYQMPVEFQENTVRDYIPKYLLAAKKEFNIGKAKVITTLPGNKII
SRIIKVPLMNQKELNAYLDLEAEQYLPVPVKDSVLASVILENAEADDGTKQMNVLLSAASREIIMDLYDTVVSTGLNLDV
IDLPFLALYRGVFSQINPEVPVAVVDIGAGNTLLIIVKDGILKFVRSIKWGANAITQMIATNMNLDFVKAEQLKEEKGEL
LAADEQVVDQEKLTIDISIRQAISELINEIRRSIDFYRTQERGNNVERILITGGGSKLKGLTELFESQLDLETFTFAPMV
EEKLDPAFTLAYGLGLWGVERDV
>Mature_342_residues
GKNRYILAFDAGVRYFKAVLLKADKKQPELLKTVTYQMPVEFQENTVRDYIPKYLLAAKKEFNIGKAKVITTLPGNKIIS
RIIKVPLMNQKELNAYLDLEAEQYLPVPVKDSVLASVILENAEADDGTKQMNVLLSAASREIIMDLYDTVVSTGLNLDVI
DLPFLALYRGVFSQINPEVPVAVVDIGAGNTLLIIVKDGILKFVRSIKWGANAITQMIATNMNLDFVKAEQLKEEKGELL
AADEQVVDQEKLTIDISIRQAISELINEIRRSIDFYRTQERGNNVERILITGGGSKLKGLTELFESQLDLETFTFAPMVE
EKLDPAFTLAYGLGLWGVERDV

Specific function: This Protein May Be Involved In Anomalous Filament Growth (By Similarity). May Be A Component Of The Septum. It May Interact With Ftsz. [C]

COG id: COG4972

COG function: function code NU; Tfp pilus assembly protein, ATPase PilM

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38391; Mature: 38260

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKNRYILAFDAGVRYFKAVLLKADKKQPELLKTVTYQMPVEFQENTVRDYIPKYLLAAK
CCCCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
KEFNIGKAKVITTLPGNKIISRIIKVPLMNQKELNAYLDLEAEQYLPVPVKDSVLASVIL
HCCCCCCEEEEEECCCHHHHHHHHHCCCCCCHHCCCEEECCCCCCCCCCCCHHHHHHHHH
ENAEADDGTKQMNVLLSAASREIIMDLYDTVVSTGLNLDVIDLPFLALYRGVFSQINPEV
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHCCCCC
PVAVVDIGAGNTLLIIVKDGILKFVRSIKWGANAITQMIATNMNLDFVKAEQLKEEKGEL
CEEEEEECCCCEEEEEECCHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCE
LAADEQVVDQEKLTIDISIRQAISELINEIRRSIDFYRTQERGNNVERILITGGGSKLKG
EECCHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHH
LTELFESQLDLETFTFAPMVEEKLDPAFTLAYGLGLWGVERDV
HHHHHHHHCCCHHEEECHHHHHHCCHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
GKNRYILAFDAGVRYFKAVLLKADKKQPELLKTVTYQMPVEFQENTVRDYIPKYLLAAK
CCCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
KEFNIGKAKVITTLPGNKIISRIIKVPLMNQKELNAYLDLEAEQYLPVPVKDSVLASVIL
HCCCCCCEEEEEECCCHHHHHHHHHCCCCCCHHCCCEEECCCCCCCCCCCCHHHHHHHHH
ENAEADDGTKQMNVLLSAASREIIMDLYDTVVSTGLNLDVIDLPFLALYRGVFSQINPEV
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHCCCCC
PVAVVDIGAGNTLLIIVKDGILKFVRSIKWGANAITQMIATNMNLDFVKAEQLKEEKGEL
CEEEEEECCCCEEEEEECCHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCE
LAADEQVVDQEKLTIDISIRQAISELINEIRRSIDFYRTQERGNNVERILITGGGSKLKG
EECCHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHH
LTELFESQLDLETFTFAPMVEEKLDPAFTLAYGLGLWGVERDV
HHHHHHHHCCCHHEEECHHHHHHCCHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA