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The map label for this gene is pilN

Identifier: 78044456

GI number: 78044456

Start: 553431

End: 553961

Strand: Direct

Name: pilN

Synonym: CHY_0640

Alternate gene names: NA

Gene position: 553431-553961 (Clockwise)

Preceding gene: 78043775

Following gene: 78044661

Centisome position: 23.05

GC content: 32.58

Gene sequence:

>531_bases
ATGTATAAAGCTAACCTCCTTCCCCCGGAACTACAAAAAGATGTCGAAATTAACACGAAAAAACTTGCCATTTTGGCGGG
GATTACTGCTTTAGTTACCATTATAATCTTTTCTTTAATTGGTTTTATGGTTCGCGTTTATTATTTAAAAAAAGATTTGG
AAGTTAAAAAGGCCAATATAGTCCAACTGCAAAAAATTGCCCAAAAGGTAAACGAAACGAAAAACGAAATTTCGTTATTG
AATAAAGAAAAAGAGGCGTTTTTGGAACTAAAACAAAAGCGACTGGTTTTTACGGTTATTTTAACGGATATTAATTTAAA
CATCCCTAAAAATACCTGGCTTACTGAAATAAAATATAATCCGGCAACCAGGGAATTATCTTTAACCGGTTCTACCCGGG
ATTCGGAAGAAGCAGGAATATTTGTTTATAATTTAAACAATTTACCGCATTTCTCCAAAGTACTTTTAGTGCAGATGATA
AGAAACAATACGGGAAATTACGACTTTTCCATAAAGGCAATTTTGAAATAA

Upstream 100 bases:

>100_bases
CTTGACCTTGAAACCTTTACCTTTGCCCCGATGGTGGAGGAAAAACTTGACCCGGCTTTTACTTTAGCCTACGGCCTGGG
ACTCTGGGGGGTGGAAAGGG

Downstream 100 bases:

>100_bases
GGGGATGGTTAAATGCCATTTTGGGAAAAACTTGCCCCGCGGGAACGAATATTGGTGGGAATCGCTCTGGGACTTACAGT
TTTTTATTTGTTATACTATT

Product: type IV pilus assembly protein PilN

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MYKANLLPPELQKDVEINTKKLAILAGITALVTIIIFSLIGFMVRVYYLKKDLEVKKANIVQLQKIAQKVNETKNEISLL
NKEKEAFLELKQKRLVFTVILTDINLNIPKNTWLTEIKYNPATRELSLTGSTRDSEEAGIFVYNLNNLPHFSKVLLVQMI
RNNTGNYDFSIKAILK

Sequences:

>Translated_176_residues
MYKANLLPPELQKDVEINTKKLAILAGITALVTIIIFSLIGFMVRVYYLKKDLEVKKANIVQLQKIAQKVNETKNEISLL
NKEKEAFLELKQKRLVFTVILTDINLNIPKNTWLTEIKYNPATRELSLTGSTRDSEEAGIFVYNLNNLPHFSKVLLVQMI
RNNTGNYDFSIKAILK
>Mature_176_residues
MYKANLLPPELQKDVEINTKKLAILAGITALVTIIIFSLIGFMVRVYYLKKDLEVKKANIVQLQKIAQKVNETKNEISLL
NKEKEAFLELKQKRLVFTVILTDINLNIPKNTWLTEIKYNPATRELSLTGSTRDSEEAGIFVYNLNNLPHFSKVLLVQMI
RNNTGNYDFSIKAILK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20168; Mature: 20168

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKANLLPPELQKDVEINTKKLAILAGITALVTIIIFSLIGFMVRVYYLKKDLEVKKANI
CCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
VQLQKIAQKVNETKNEISLLNKEKEAFLELKQKRLVFTVILTDINLNIPKNTWLTEIKYN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCCCCEEEEEEEC
PATRELSLTGSTRDSEEAGIFVYNLNNLPHFSKVLLVQMIRNNTGNYDFSIKAILK
CCCCEEEECCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEEEEEC
>Mature Secondary Structure
MYKANLLPPELQKDVEINTKKLAILAGITALVTIIIFSLIGFMVRVYYLKKDLEVKKANI
CCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
VQLQKIAQKVNETKNEISLLNKEKEAFLELKQKRLVFTVILTDINLNIPKNTWLTEIKYN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCCCCEEEEEEEC
PATRELSLTGSTRDSEEAGIFVYNLNNLPHFSKVLLVQMIRNNTGNYDFSIKAILK
CCCCEEEECCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA