| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
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The map label for this gene is 78044930
Identifier: 78044930
GI number: 78044930
Start: 551150
End: 552295
Strand: Direct
Name: 78044930
Synonym: CHY_0638
Alternate gene names: NA
Gene position: 551150-552295 (Clockwise)
Preceding gene: 78043266
Following gene: 78043775
Centisome position: 22.95
GC content: 33.94
Gene sequence:
>1146_bases TTGTTAAAAGATGATAAAGGTTATATTTTATTAACGGTTTTAGTTATTGGTATTATTTTTGCTATTTTAGCCACCGGATT GTTTAACTTATCTTTAAACGAAAAAAGTATTTCTAACATAAATTTAGGAAAGGAACAAGCCTACTATTGTGCAGAGGCCG GACTGGAGCTGGCGTTATACGCTTTAGAAAAAGACCCACAAAAGTTTCTAAGGCAAAATTTAACATTAGACGAATTTAGC GATTTGCCGGTAGGGAATGGTAAAATTGAGCAAGTAACTTCCCAAATCAGTTCGGTGAGTGGAAGTGTATATACAATATT GCTAGAAAGTAAGGGTATTGTGCCCAATGGGGCAAAAAAGACCGTTCAAGCAAGGGTAAAGGTAAGTTTAGGTGCAGCGC AAAATTTAAACCTCAACAATTTTACTTTATTCTTAAATAATAATGAGCCTAATTTAAATTTCAACAAAAAATCCGAAGTT ATCGGTAATCTTGTTGTTCCGGGAGATATTGTGTTAGAGGCGGATGATATTACCGGCGCGGTTTATGGTCAAAACGTTAC CGTGTTAAGGGGAGAAGGCAAAAGTTCCTTTACGATTACTAAAATTTATTACACCAATTCCGTTAATACCAACGGTCTTA ATATTCCTACGGAAAAAATTAATAATTTATTTTCAACTTTAAACTTAAATTTTGACGATAGTTATCTGCGATCGTTGCCC AATATTGTGGTTTTAAAGACTAATAAATACTCCTTATCTCCGGGCGATAGCGGAAAAATTGTGTATCTTATTCCTACTGA ACCTAATGATGAGGTAGAAATAGATAATAACTCGTCTTATCAGTACAACGGAAACTATCTAATTATCTCTCCCAATACAA TTGAAATTGAAAGTAGCTATAGTAGAGCGAACAACAATTCAAATCTTACAATAATATCGGTAAATGGGGATATAAAGTTA GAAAAGAAAATAGATGTCACCGCTAATCTGATTGCCTTGAATGGTAGCCTTGAATATCACGACAATAGCGGAAAAGCAAC GGTTACCGGGGTTGTGATGGTAAACGATATTAATAAAAAGGAAAATAACAACAATGTGAAAGCAATGCTAACTTACGACC CGTATAATAATTTAACCAATATTTAA
Upstream 100 bases:
>100_bases AAATTTATAACTTAAAACTCAATCTTAGTTTAATTAATAAACCTTCTGCTACCCTTTCCACTTCGGTGGTAACCAGGGTA ACGAGATAGGTGGTGAAATT
Downstream 100 bases:
>100_bases CAACCATTTTTAAATAAAAGTAGTGAAATTAAAATATTAGAGTGGAAAGAGCTTTACCAAGTTTTTTAGAAAAGGATGGA GGGCTAAGTGCAAAGTTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 381; Mature: 381
Protein sequence:
>381_residues MLKDDKGYILLTVLVIGIIFAILATGLFNLSLNEKSISNINLGKEQAYYCAEAGLELALYALEKDPQKFLRQNLTLDEFS DLPVGNGKIEQVTSQISSVSGSVYTILLESKGIVPNGAKKTVQARVKVSLGAAQNLNLNNFTLFLNNNEPNLNFNKKSEV IGNLVVPGDIVLEADDITGAVYGQNVTVLRGEGKSSFTITKIYYTNSVNTNGLNIPTEKINNLFSTLNLNFDDSYLRSLP NIVVLKTNKYSLSPGDSGKIVYLIPTEPNDEVEIDNNSSYQYNGNYLIISPNTIEIESSYSRANNNSNLTIISVNGDIKL EKKIDVTANLIALNGSLEYHDNSGKATVTGVVMVNDINKKENNNNVKAMLTYDPYNNLTNI
Sequences:
>Translated_381_residues MLKDDKGYILLTVLVIGIIFAILATGLFNLSLNEKSISNINLGKEQAYYCAEAGLELALYALEKDPQKFLRQNLTLDEFS DLPVGNGKIEQVTSQISSVSGSVYTILLESKGIVPNGAKKTVQARVKVSLGAAQNLNLNNFTLFLNNNEPNLNFNKKSEV IGNLVVPGDIVLEADDITGAVYGQNVTVLRGEGKSSFTITKIYYTNSVNTNGLNIPTEKINNLFSTLNLNFDDSYLRSLP NIVVLKTNKYSLSPGDSGKIVYLIPTEPNDEVEIDNNSSYQYNGNYLIISPNTIEIESSYSRANNNSNLTIISVNGDIKL EKKIDVTANLIALNGSLEYHDNSGKATVTGVVMVNDINKKENNNNVKAMLTYDPYNNLTNI >Mature_381_residues MLKDDKGYILLTVLVIGIIFAILATGLFNLSLNEKSISNINLGKEQAYYCAEAGLELALYALEKDPQKFLRQNLTLDEFS DLPVGNGKIEQVTSQISSVSGSVYTILLESKGIVPNGAKKTVQARVKVSLGAAQNLNLNNFTLFLNNNEPNLNFNKKSEV IGNLVVPGDIVLEADDITGAVYGQNVTVLRGEGKSSFTITKIYYTNSVNTNGLNIPTEKINNLFSTLNLNFDDSYLRSLP NIVVLKTNKYSLSPGDSGKIVYLIPTEPNDEVEIDNNSSYQYNGNYLIISPNTIEIESSYSRANNNSNLTIISVNGDIKL EKKIDVTANLIALNGSLEYHDNSGKATVTGVVMVNDINKKENNNNVKAMLTYDPYNNLTNI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41743; Mature: 41743
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKDDKGYILLTVLVIGIIFAILATGLFNLSLNEKSISNINLGKEQAYYCAEAGLELALY CCCCCCCEEEHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCHHHHEEHHCCCEEEEE ALEKDPQKFLRQNLTLDEFSDLPVGNGKIEQVTSQISSVSGSVYTILLESKGIVPNGAKK EECCCHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCC TVQARVKVSLGAAQNLNLNNFTLFLNNNEPNLNFNKKSEVIGNLVVPGDIVLEADDITGA EEEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCHHHHCEEECCCEEEEEECCCCEE VYGQNVTVLRGEGKSSFTITKIYYTNSVNTNGLNIPTEKINNLFSTLNLNFDDSYLRSLP EECCEEEEEECCCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHEEECCCCHHHHHHCC NIVVLKTNKYSLSPGDSGKIVYLIPTEPNDEVEIDNNSSYQYNGNYLIISPNTIEIESSY CEEEEECCCEEECCCCCCCEEEEEECCCCCCEEECCCCCEEECCCEEEECCCEEEEECCC SRANNNSNLTIISVNGDIKLEKKIDVTANLIALNGSLEYHDNSGKATVTGVVMVNDINKK CCCCCCCCEEEEEECCCEEEEEEECEEEEEEEEECEEEEECCCCCEEEEEEEEEECCCCC ENNNNVKAMLTYDPYNNLTNI CCCCCEEEEEEECCCCCCCCC >Mature Secondary Structure MLKDDKGYILLTVLVIGIIFAILATGLFNLSLNEKSISNINLGKEQAYYCAEAGLELALY CCCCCCCEEEHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCHHHHEEHHCCCEEEEE ALEKDPQKFLRQNLTLDEFSDLPVGNGKIEQVTSQISSVSGSVYTILLESKGIVPNGAKK EECCCHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCC TVQARVKVSLGAAQNLNLNNFTLFLNNNEPNLNFNKKSEVIGNLVVPGDIVLEADDITGA EEEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCHHHHCEEECCCEEEEEECCCCEE VYGQNVTVLRGEGKSSFTITKIYYTNSVNTNGLNIPTEKINNLFSTLNLNFDDSYLRSLP EECCEEEEEECCCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHEEECCCCHHHHHHCC NIVVLKTNKYSLSPGDSGKIVYLIPTEPNDEVEIDNNSSYQYNGNYLIISPNTIEIESSY CEEEEECCCEEECCCCCCCEEEEEECCCCCCEEECCCCCEEECCCEEEECCCEEEEECCC SRANNNSNLTIISVNGDIKLEKKIDVTANLIALNGSLEYHDNSGKATVTGVVMVNDINKK CCCCCCCCEEEEEECCCEEEEEEECEEEEEEEEECEEEEECCCCCEEEEEEEEEECCCCC ENNNNVKAMLTYDPYNNLTNI CCCCCEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA