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The map label for this gene is yidD [C]

Identifier: 78043459

GI number: 78043459

Start: 769

End: 996

Strand: Direct

Name: yidD [C]

Synonym: CHY_0003

Alternate gene names: 78043459

Gene position: 769-996 (Clockwise)

Preceding gene: 78045102

Following gene: 78043134

Centisome position: 0.03

GC content: 39.47

Gene sequence:

>228_bases
ATGCGTAAAATTATCTTACTTCTTATTCGCTTTTATCAGAAATTTGTATCTCCTATATTAGGCAGTAATTGTCGTTTTTA
CCCTTCTTGTTCCCAGTATACATATGAAGCTATCGAGCGGTATGGAGTTATCTACGGAAGTTACCTGGGAATTAAAAGAA
TCCTACGCTGTCATCCTTTTACTCCCGGAGGCTACGATCCGGTACCCGAGAAAAAGCTAAGGAGGTAA

Upstream 100 bases:

>100_bases
TATGTAATTATACCTCGGTTATCCTTTAAAAATGATGAATTTTCTGTGATTTTAGAACAGCTGTTATATATAATTAAATT
AATGAAGCGGTCGATCGATA

Downstream 100 bases:

>100_bases
AAATGTTTTGCAGCCATTAATTGATGCTATAACCTGGATTTTAAATAACCTTTATTTGTTTACCAAAAGCATAGGAATAC
CGAGTTATGCCCTGGCTATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 75; Mature: 75

Protein sequence:

>75_residues
MRKIILLLIRFYQKFVSPILGSNCRFYPSCSQYTYEAIERYGVIYGSYLGIKRILRCHPFTPGGYDPVPEKKLRR

Sequences:

>Translated_75_residues
MRKIILLLIRFYQKFVSPILGSNCRFYPSCSQYTYEAIERYGVIYGSYLGIKRILRCHPFTPGGYDPVPEKKLRR
>Mature_75_residues
MRKIILLLIRFYQKFVSPILGSNCRFYPSCSQYTYEAIERYGVIYGSYLGIKRILRCHPFTPGGYDPVPEKKLRR

Specific function: Unknown

COG id: COG0759

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0161 family

Homologues:

Organism=Escherichia coli, GI87082322, Length=67, Percent_Identity=56.7164179104478, Blast_Score=93, Evalue=3e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y003_CARHZ (Q3AG59)

Other databases:

- EMBL:   CP000141
- RefSeq:   YP_358875.1
- STRING:   Q3AG59
- GeneID:   3728843
- GenomeReviews:   CP000141_GR
- KEGG:   chy:CHY_0003
- NMPDR:   fig|246194.3.peg.101
- TIGR:   CHY_0003
- eggNOG:   COG0759
- HOGENOM:   HBG634291
- OMA:   HPERYED
- BioCyc:   CHYD246194:CHY_0003-MONOMER
- HAMAP:   MF_00386
- InterPro:   IPR002696
- ProDom:   PD004225
- TIGRFAMs:   TIGR00278

Pfam domain/function: PF01809 DUF37

EC number: NA

Molecular weight: Translated: 8882; Mature: 8882

Theoretical pI: Translated: 10.14; Mature: 10.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKIILLLIRFYQKFVSPILGSNCRFYPSCSQYTYEAIERYGVIYGSYLGIKRILRCHPF
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
TPGGYDPVPEKKLRR
CCCCCCCCCHHHCCC
>Mature Secondary Structure
MRKIILLLIRFYQKFVSPILGSNCRFYPSCSQYTYEAIERYGVIYGSYLGIKRILRCHPF
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
TPGGYDPVPEKKLRR
CCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA