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The map label for this gene is oxaA [H]

Identifier: 78043134

GI number: 78043134

Start: 1004

End: 1675

Strand: Direct

Name: oxaA [H]

Synonym: CHY_0004

Alternate gene names: 78043134

Gene position: 1004-1675 (Clockwise)

Preceding gene: 78043459

Following gene: 78045166

Centisome position: 0.04

GC content: 36.76

Gene sequence:

>672_bases
TTGCAGCCATTAATTGATGCTATAACCTGGATTTTAAATAACCTTTATTTGTTTACCAAAAGCATAGGAATACCGAGTTA
TGCCCTGGCTATTATCATGCTTACTATTTTGATAAAAATTATCTTATATCCTTTAAATCATGCTCAAATGAAGTCGATGA
AAGTCATGCAAGAACTGCAGCCCAAAATGCAGGAAATTCAAAAAAAATATAAAAATGATCCGCAAAAACAGCAGCAGGCT
TTAATGGAACTTTATAAAGAATACGGGGTTAACCCGATGTCCGGTTGTTTACCGATGTTAATTCAATTACCTATTTTAAT
TGCATTATACCGTGCTCTTTACAATTTTAAGTATTTAAATCCGGCTCATGCTAAATTTTTCTGGATTGCCAATATAAGTC
ACAAAGACCCGTATTTTATTTTGCCGATACTGGCTGCTCTTACCACTTACATCCAGAGTAGAATGACTATGACATCGGGC
AATGACCCCAACCAAAAAGTTATGCTTTATGTTATGCCGCTAATGATTGGCTGGATTGCTATGTCGTTGCCGGCGGGATT
GGGTATTTACTGGGTGGTATTAAATATCATGGGCATTATTCAGCAGTATTTCGTCAATCAAAGCACCCACAAGATTGTTG
AAAGGGGTACCAAAGAAAATGCGGGAGATTGA

Upstream 100 bases:

>100_bases
GGAAGTTACCTGGGAATTAAAAGAATCCTACGCTGTCATCCTTTTACTCCCGGAGGCTACGATCCGGTACCCGAGAAAAA
GCTAAGGAGGTAAAAATGTT

Downstream 100 bases:

>100_bases
GGTTACCGGCAAGACTGTTGAGGAAGCGGTAAGTTTGGGTTTAGAGCAGCTCGGGGTAGATCGATCGCTCGTTGAGATTG
AAATTTTGGAGCAACCTTCC

Product: sporulation associated-membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MQPLIDAITWILNNLYLFTKSIGIPSYALAIIMLTILIKIILYPLNHAQMKSMKVMQELQPKMQEIQKKYKNDPQKQQQA
LMELYKEYGVNPMSGCLPMLIQLPILIALYRALYNFKYLNPAHAKFFWIANISHKDPYFILPILAALTTYIQSRMTMTSG
NDPNQKVMLYVMPLMIGWIAMSLPAGLGIYWVVLNIMGIIQQYFVNQSTHKIVERGTKENAGD

Sequences:

>Translated_223_residues
MQPLIDAITWILNNLYLFTKSIGIPSYALAIIMLTILIKIILYPLNHAQMKSMKVMQELQPKMQEIQKKYKNDPQKQQQA
LMELYKEYGVNPMSGCLPMLIQLPILIALYRALYNFKYLNPAHAKFFWIANISHKDPYFILPILAALTTYIQSRMTMTSG
NDPNQKVMLYVMPLMIGWIAMSLPAGLGIYWVVLNIMGIIQQYFVNQSTHKIVERGTKENAGD
>Mature_223_residues
MQPLIDAITWILNNLYLFTKSIGIPSYALAIIMLTILIKIILYPLNHAQMKSMKVMQELQPKMQEIQKKYKNDPQKQQQA
LMELYKEYGVNPMSGCLPMLIQLPILIALYRALYNFKYLNPAHAKFFWIANISHKDPYFILPILAALTTYIQSRMTMTSG
NDPNQKVMLYVMPLMIGWIAMSLPAGLGIYWVVLNIMGIIQQYFVNQSTHKIVERGTKENAGD

Specific function: Required for the insertion of integral membrane proteins into the membrane. Probably plays an essential role in the integration of proteins of the respiratory chain complexes. Involved in integration of membrane proteins that insert dependently and indepe

COG id: COG0706

COG function: function code U; Preprotein translocase subunit YidC

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OXA1/oxaA family. Type 1 subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790140, Length=210, Percent_Identity=36.6666666666667, Blast_Score=139, Evalue=2e-34,
Organism=Drosophila melanogaster, GI24662345, Length=187, Percent_Identity=26.2032085561497, Blast_Score=72, Evalue=4e-13,
Organism=Drosophila melanogaster, GI21356443, Length=187, Percent_Identity=26.2032085561497, Blast_Score=72, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019998
- InterPro:   IPR001708 [H]

Pfam domain/function: PF02096 60KD_IMP [H]

EC number: NA

Molecular weight: Translated: 25678; Mature: 25678

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
7.2 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
7.2 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPLIDAITWILNNLYLFTKSIGIPSYALAIIMLTILIKIILYPLNHAQMKSMKVMQELQ
CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
PKMQEIQKKYKNDPQKQQQALMELYKEYGVNPMSGCLPMLIQLPILIALYRALYNFKYLN
HHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PAHAKFFWIANISHKDPYFILPILAALTTYIQSRMTMTSGNDPNQKVMLYVMPLMIGWIA
CHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
MSLPAGLGIYWVVLNIMGIIQQYFVNQSTHKIVERGTKENAGD
HHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MQPLIDAITWILNNLYLFTKSIGIPSYALAIIMLTILIKIILYPLNHAQMKSMKVMQELQ
CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
PKMQEIQKKYKNDPQKQQQALMELYKEYGVNPMSGCLPMLIQLPILIALYRALYNFKYLN
HHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PAHAKFFWIANISHKDPYFILPILAALTTYIQSRMTMTSGNDPNQKVMLYVMPLMIGWIA
CHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
MSLPAGLGIYWVVLNIMGIIQQYFVNQSTHKIVERGTKENAGD
HHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 14500908 [H]