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The map label for this gene is mcpB [H]

Identifier: 78042845

GI number: 78042845

Start: 182543

End: 183649

Strand: Direct

Name: mcpB [H]

Synonym: CHY_0216

Alternate gene names: 78042845

Gene position: 182543-183649 (Clockwise)

Preceding gene: 78044290

Following gene: 78043239

Centisome position: 7.6

GC content: 40.29

Gene sequence:

>1107_bases
ATGAACTACAACAACTGGTTTTACTGGCTAAATCTTGTCTTAGGCGGAATAAGTGGGATAGTTTTCGGAATAATTTATAG
CAATTTTATTTTTCTTTTAATTGGCGGTATTTTGGTCTTTACCAACCTTTGGGGCTATTACTTTATTTACCTTAAAGAAA
AAAAAGAGTTTGCCAAAATATTAGAATTTGGTGTAGCGGCTAAAAATAAAAACTTAAGAGAATTATTAAACTATCAACCG
CCGCAAAAGGGCATTCTTAATGAATTAGGAGAAACCTTTAAGTTCCTGGGGGAGCAGATCTATAATTCGGTAAAATATGC
CGGAGAGGATGCCCAGACGCAGTCGGAGATTATTGAGAGTTTAACTTCGGCCTTTGAACAGGTGGCAACCGGTACTCAGC
ACCAGGTAGGGCAAATTCAAAACTTAACGCTATCTTTAGAAAAACTAGCGAAGGAGATTAATGAGGTGGCTAAGTTAGCC
GCTAATACCGAACAGCTTGCCCAAAGAGCCCGCGAGCTTACCCAAAAAGGAGTCAAACAAAGCGAAGTAGCTGGGCAGGA
AATGGAGAGCATAAGTCAAAGTATTAATGATTTAGAAAAAAATTCTGCTAACATAGCTGCTATCTTAGAAGTGATCAATG
AAATTGCCGATCAAACATCGCTTTTGGCTTTAAATGCAGCAATTGAAGCGGCTCGAGCTGGAGAGGCAGGAAGAGGTTTT
GCGGTCGTTGCTGATGAGGTAAGAAAACTTGCCGATAAATCCAGGGAATCGGTTATGAAGATTGAGGAAATTATTAAAGA
TGTACAGGGCAAGACTAAAGTGGCAGTAAACAATACTAAAAACGGTGTTGCTGCTATTACCAGTTTAAGCCAGGCGTTTA
ATGAAATAAATACTCATGTCCAAGAAATGACTGAATATATGGCTCAAGTTTCCGAAAAAACCGAAATCCAAGCTGCTGCC
AGCGAGGAAGTATCGGGGGCAGCCCAGACCATAGCTGCGGTCATTGAAGAAATTTCCGCCAGCACCCAGGAAATAGCTGC
AACTTCTAAAAAACTTACCGAGATTAATGCGGCTTTAAAGGAACATGTGGCCAGCCATATTTTATAA

Upstream 100 bases:

>100_bases
GCTTAAAACCTTGTAAAAAGCTTTTTCTAATTTACAGTAATTTTCGAAAATAATAAAATAAAAGTTAAGCGGAAAAATAT
ATTATCATTGGGGTGAAAAA

Downstream 100 bases:

>100_bases
AGGTTAAAACCCAGCACCTTTAGGGATGGTATCCAAACCCTAAAGGTGTTTTTTTAATCTACAATTTACAACGATTAAGA
AGAGTTGGTAAAATAAAAGA

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: H3 [H]

Number of amino acids: Translated: 368; Mature: 368

Protein sequence:

>368_residues
MNYNNWFYWLNLVLGGISGIVFGIIYSNFIFLLIGGILVFTNLWGYYFIYLKEKKEFAKILEFGVAAKNKNLRELLNYQP
PQKGILNELGETFKFLGEQIYNSVKYAGEDAQTQSEIIESLTSAFEQVATGTQHQVGQIQNLTLSLEKLAKEINEVAKLA
ANTEQLAQRARELTQKGVKQSEVAGQEMESISQSINDLEKNSANIAAILEVINEIADQTSLLALNAAIEAARAGEAGRGF
AVVADEVRKLADKSRESVMKIEEIIKDVQGKTKVAVNNTKNGVAAITSLSQAFNEINTHVQEMTEYMAQVSEKTEIQAAA
SEEVSGAAQTIAAVIEEISASTQEIAATSKKLTEINAALKEHVASHIL

Sequences:

>Translated_368_residues
MNYNNWFYWLNLVLGGISGIVFGIIYSNFIFLLIGGILVFTNLWGYYFIYLKEKKEFAKILEFGVAAKNKNLRELLNYQP
PQKGILNELGETFKFLGEQIYNSVKYAGEDAQTQSEIIESLTSAFEQVATGTQHQVGQIQNLTLSLEKLAKEINEVAKLA
ANTEQLAQRARELTQKGVKQSEVAGQEMESISQSINDLEKNSANIAAILEVINEIADQTSLLALNAAIEAARAGEAGRGF
AVVADEVRKLADKSRESVMKIEEIIKDVQGKTKVAVNNTKNGVAAITSLSQAFNEINTHVQEMTEYMAQVSEKTEIQAAA
SEEVSGAAQTIAAVIEEISASTQEIAATSKKLTEINAALKEHVASHIL
>Mature_368_residues
MNYNNWFYWLNLVLGGISGIVFGIIYSNFIFLLIGGILVFTNLWGYYFIYLKEKKEFAKILEFGVAAKNKNLRELLNYQP
PQKGILNELGETFKFLGEQIYNSVKYAGEDAQTQSEIIESLTSAFEQVATGTQHQVGQIQNLTLSLEKLAKEINEVAKLA
ANTEQLAQRARELTQKGVKQSEVAGQEMESISQSINDLEKNSANIAAILEVINEIADQTSLLALNAAIEAARAGEAGRGF
AVVADEVRKLADKSRESVMKIEEIIKDVQGKTKVAVNNTKNGVAAITSLSQAFNEINTHVQEMTEYMAQVSEKTEIQAAA
SEEVSGAAQTIAAVIEEISASTQEIAATSKKLTEINAALKEHVASHIL

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=232, Percent_Identity=33.6206896551724, Blast_Score=108, Evalue=8e-25,
Organism=Escherichia coli, GI1788195, Length=262, Percent_Identity=29.0076335877863, Blast_Score=105, Evalue=4e-24,
Organism=Escherichia coli, GI1789453, Length=307, Percent_Identity=27.3615635179153, Blast_Score=98, Evalue=7e-22,
Organism=Escherichia coli, GI1787690, Length=297, Percent_Identity=30.3030303030303, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI1788194, Length=231, Percent_Identity=32.034632034632, Blast_Score=96, Evalue=4e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 40327; Mature: 40327

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYNNWFYWLNLVLGGISGIVFGIIYSNFIFLLIGGILVFTNLWGYYFIYLKEKKEFAKI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEFGVAAKNKNLRELLNYQPPQKGILNELGETFKFLGEQIYNSVKYAGEDAQTQSEIIES
HHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
LTSAFEQVATGTQHQVGQIQNLTLSLEKLAKEINEVAKLAANTEQLAQRARELTQKGVKQ
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHH
SEVAGQEMESISQSINDLEKNSANIAAILEVINEIADQTSLLALNAAIEAARAGEAGRGF
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
AVVADEVRKLADKSRESVMKIEEIIKDVQGKTKVAVNNTKNGVAAITSLSQAFNEINTHV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHH
QEMTEYMAQVSEKTEIQAAASEEVSGAAQTIAAVIEEISASTQEIAATSKKLTEINAALK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EHVASHIL
HHHHHHCC
>Mature Secondary Structure
MNYNNWFYWLNLVLGGISGIVFGIIYSNFIFLLIGGILVFTNLWGYYFIYLKEKKEFAKI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEFGVAAKNKNLRELLNYQPPQKGILNELGETFKFLGEQIYNSVKYAGEDAQTQSEIIES
HHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
LTSAFEQVATGTQHQVGQIQNLTLSLEKLAKEINEVAKLAANTEQLAQRARELTQKGVKQ
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHH
SEVAGQEMESISQSINDLEKNSANIAAILEVINEIADQTSLLALNAAIEAARAGEAGRGF
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
AVVADEVRKLADKSRESVMKIEEIIKDVQGKTKVAVNNTKNGVAAITSLSQAFNEINTHV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHH
QEMTEYMAQVSEKTEIQAAASEEVSGAAQTIAAVIEEISASTQEIAATSKKLTEINAALK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EHVASHIL
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8188684; 9384377 [H]