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The map label for this gene is yqjV [H]

Identifier: 78042642

GI number: 78042642

Start: 83978

End: 85198

Strand: Direct

Name: yqjV [H]

Synonym: CHY_0098

Alternate gene names: 78042642

Gene position: 83978-85198 (Clockwise)

Preceding gene: 78043821

Following gene: 78044996

Centisome position: 3.5

GC content: 44.06

Gene sequence:

>1221_bases
TTGCAGGTAGCGACATCTTTAAAAAAAAGCTTTAAAGTTTATAGCGGCCTTCCCAAGAGCATATATGTTTTGTTTGTTGC
AAATATTGTTAATAATATGGGTAATTTTGTCTGGCCTTTTTTAACGATCCTTTTTACCAGGAAACTCGGGCTGGGAGCGG
AAAAGGCAGGATTAATTGTAACCATAGCAATTTTATTCCAGCTCCCCGGGGCTTTTGTTGCCGGAAAGGTTGCCGATAAG
GTGGGGCGCAAAAAAGTCCTGGTATTTTATCAAAGCGCTGCGGGTTTTTTATTTATTCCGGCGGCTTTTATGCTCGATCC
CTACGCGATAGCTACAATTGTTGTTATTTCCGGGTTTTTCTGGGGTGGGGTGCAGCCGGTAAGTAGAGCTTTAATTACCG
ACCTTACCCAGGGAGAACAGAGGATTCGGGCTTTCTCTTTGACATACCTTGGAGTTAACATTGGTTTTGCTTTGGGCCCC
CTTTTGGCGGGGTTTCTTTATGCCTACGGGATAAAGGTTATCTTTCTGGGAAATGCCTTCTCTTGCCTGGCTTCTTCGAT
GTTATCGGCATTTTTTGTGAAGGAACCGGCCACTCCTTCTGAGGGTAAAAATAGTTTTGAAGCGCCAGTAGAGGGTGGAC
TAATCGATGTATTAAAGCTTAGACCTTCTCTGTTTTTCTTTTCACTAATCTGGTTTATTTATTCTTTTGTTTATGTTCAA
TCTACTTTTGGGATGTCTTTAACGGTGACGGATTTATTTGGAGAGTTAACCGGGGCTAAGGTGTTAGGAAGTTTAATGAC
GGCAAATGGGCTGGGAGTAGTGCTTTTAACCGGACCTTTAACGAAAATCTTTGAGCACCGGGAGCCTTTAACGGCAATTT
ATATTTCCGGAATTCTTTATGCTGTCGGTTTTGGCATGCTTGCCTTTGTCAAAAGCTATCTTTTCCTATTAATTTCGGCT
TTTATCTGGACGGCCGGGGAAGTGGCGGGAGCGGTTACGGTAAATGTTTATATTTCCGACCGTACTCCGGTTACCCATCG
GGGAAGGGTAAATGCTTTTTTACATATCATGTCCCGGGCGGGTTTTTCAGCGGGGCCTGTAGTAATGGGAGCGGTAGCTT
CGTTATATGGTTTAAAACTTTTATGGCTTCTTTCCGGAGTACTGGCTTTAGCAGGGGCGATAGCGGTCTTATACTTACGG
CAACTGGAGGGGGCTTTGTGA

Upstream 100 bases:

>100_bases
AGGGGCTTTTAGCGGGGCTGGTTTACTGGTTCGTATATTTGTATAAACGAAGCAAATGTAATATAATTAACTGGTAGTTT
TCTTGAGGGGAGAGGGGATT

Downstream 100 bases:

>100_bases
AACTAAGCTTAATTGCTACTGCAGCTTTTGGTTTGGAGTCGGTGGTAGCGTTAGAATTAAAAAATCTTGGGATTAACGAT
GTCATGGTGGAAAATGGGAA

Product: putative transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 406; Mature: 406

Protein sequence:

>406_residues
MQVATSLKKSFKVYSGLPKSIYVLFVANIVNNMGNFVWPFLTILFTRKLGLGAEKAGLIVTIAILFQLPGAFVAGKVADK
VGRKKVLVFYQSAAGFLFIPAAFMLDPYAIATIVVISGFFWGGVQPVSRALITDLTQGEQRIRAFSLTYLGVNIGFALGP
LLAGFLYAYGIKVIFLGNAFSCLASSMLSAFFVKEPATPSEGKNSFEAPVEGGLIDVLKLRPSLFFFSLIWFIYSFVYVQ
STFGMSLTVTDLFGELTGAKVLGSLMTANGLGVVLLTGPLTKIFEHREPLTAIYISGILYAVGFGMLAFVKSYLFLLISA
FIWTAGEVAGAVTVNVYISDRTPVTHRGRVNAFLHIMSRAGFSAGPVVMGAVASLYGLKLLWLLSGVLALAGAIAVLYLR
QLEGAL

Sequences:

>Translated_406_residues
MQVATSLKKSFKVYSGLPKSIYVLFVANIVNNMGNFVWPFLTILFTRKLGLGAEKAGLIVTIAILFQLPGAFVAGKVADK
VGRKKVLVFYQSAAGFLFIPAAFMLDPYAIATIVVISGFFWGGVQPVSRALITDLTQGEQRIRAFSLTYLGVNIGFALGP
LLAGFLYAYGIKVIFLGNAFSCLASSMLSAFFVKEPATPSEGKNSFEAPVEGGLIDVLKLRPSLFFFSLIWFIYSFVYVQ
STFGMSLTVTDLFGELTGAKVLGSLMTANGLGVVLLTGPLTKIFEHREPLTAIYISGILYAVGFGMLAFVKSYLFLLISA
FIWTAGEVAGAVTVNVYISDRTPVTHRGRVNAFLHIMSRAGFSAGPVVMGAVASLYGLKLLWLLSGVLALAGAIAVLYLR
QLEGAL
>Mature_406_residues
MQVATSLKKSFKVYSGLPKSIYVLFVANIVNNMGNFVWPFLTILFTRKLGLGAEKAGLIVTIAILFQLPGAFVAGKVADK
VGRKKVLVFYQSAAGFLFIPAAFMLDPYAIATIVVISGFFWGGVQPVSRALITDLTQGEQRIRAFSLTYLGVNIGFALGP
LLAGFLYAYGIKVIFLGNAFSCLASSMLSAFFVKEPATPSEGKNSFEAPVEGGLIDVLKLRPSLFFFSLIWFIYSFVYVQ
STFGMSLTVTDLFGELTGAKVLGSLMTANGLGVVLLTGPLTKIFEHREPLTAIYISGILYAVGFGMLAFVKSYLFLLISA
FIWTAGEVAGAVTVNVYISDRTPVTHRGRVNAFLHIMSRAGFSAGPVVMGAVASLYGLKLLWLLSGVLALAGAIAVLYLR
QLEGAL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. TCR/tet family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR005829
- InterPro:   IPR001958 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 43643; Mature: 43643

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVATSLKKSFKVYSGLPKSIYVLFVANIVNNMGNFVWPFLTILFTRKLGLGAEKAGLIV
CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
TIAILFQLPGAFVAGKVADKVGRKKVLVFYQSAAGFLFIPAAFMLDPYAIATIVVISGFF
HHHHHHHCCCHHHHHHHHHHCCCCEEEEEEECCCCCEEECHHHHHCHHHHHHHHHHHHHH
WGGVQPVSRALITDLTQGEQRIRAFSLTYLGVNIGFALGPLLAGFLYAYGIKVIFLGNAF
CCCHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHEEEEECCHH
SCLASSMLSAFFVKEPATPSEGKNSFEAPVEGGLIDVLKLRPSLFFFSLIWFIYSFVYVQ
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
STFGMSLTVTDLFGELTGAKVLGSLMTANGLGVVLLTGPLTKIFEHREPLTAIYISGILY
HHCCCEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHCCCCHHHHHHHHHHH
AVGFGMLAFVKSYLFLLISAFIWTAGEVAGAVTVNVYISDRTPVTHRGRVNAFLHIMSRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHC
GFSAGPVVMGAVASLYGLKLLWLLSGVLALAGAIAVLYLRQLEGAL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQVATSLKKSFKVYSGLPKSIYVLFVANIVNNMGNFVWPFLTILFTRKLGLGAEKAGLIV
CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
TIAILFQLPGAFVAGKVADKVGRKKVLVFYQSAAGFLFIPAAFMLDPYAIATIVVISGFF
HHHHHHHCCCHHHHHHHHHHCCCCEEEEEEECCCCCEEECHHHHHCHHHHHHHHHHHHHH
WGGVQPVSRALITDLTQGEQRIRAFSLTYLGVNIGFALGPLLAGFLYAYGIKVIFLGNAF
CCCHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHEEEEECCHH
SCLASSMLSAFFVKEPATPSEGKNSFEAPVEGGLIDVLKLRPSLFFFSLIWFIYSFVYVQ
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
STFGMSLTVTDLFGELTGAKVLGSLMTANGLGVVLLTGPLTKIFEHREPLTAIYISGILY
HHCCCEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHCCCCHHHHHHHHHHH
AVGFGMLAFVKSYLFLLISAFIWTAGEVAGAVTVNVYISDRTPVTHRGRVNAFLHIMSRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHC
GFSAGPVVMGAVASLYGLKLLWLLSGVLALAGAIAVLYLRQLEGAL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]