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The map label for this gene is 78043821

Identifier: 78043821

GI number: 78043821

Start: 82973

End: 83872

Strand: Direct

Name: 78043821

Synonym: CHY_0097

Alternate gene names: NA

Gene position: 82973-83872 (Clockwise)

Preceding gene: 78045188

Following gene: 78042642

Centisome position: 3.46

GC content: 40.0

Gene sequence:

>900_bases
ATGAAACCTCAATACCTCTTACTTTTAAAGACCGGTGAACTTAGGGAGAGAGTTGTAAAGTTAGAGGATGTATTAAAAAA
ATGCACTCTTTGTCCTCATAACTGTCAAGTAAATCGAAGCCGTGGGGAAAGGGGATTTTGCGGTGGAGGTTATTTGCCGG
TGGTGGCAAGCTATGGACCGCATTTTGGGGAGGAAAGGGTTTTAGTGGGGGAACATGGTTCCGGCACAATCTTTTTTAGC
CACTGTACTTTAAAATGTGTTTTTTGCCAGAACTGTGAGATAAGTCAGTACGGCGAAGGGGAGGAAGTTACGCCCCAAGA
TTTAGCCAAGATAATGCTTATCTTACAAAGGAGAGGATGCCACAATATCAATTTAGTTTCCCCTACCCATTATGTACCGG
CAATTGTAAAAGCCGTCCTTATAGCAGCAGAAGAAGGGTTAAAAATTCCTCTTGTTTATAACACCAGTGGTTATGAAAAT
GTTGAGACTTTACGGTTGTTAGAAGGTATAGTTGATATTTACATGCCGGATATTAAATTTGGAGATGATGAAATCGGAAA
AAAATATGCCAAGGCTCCGGGCTATTTTGCAATTACCAAAAAGGCGGTTTTAGAAATGGACCGTCAGGTAGGAGGACTCA
AATTTGATGAAAAAGGAGTAGCCTGTAGAGGAGTTTTAATTCGCCATCTAATTTTACCGGAAAATTTAGCTAAAACCGAT
AAAGTTCTGGAATTTATTTCTAAGGAGTTATCTTCGGACGTGGCGGTAAACCTTATGGACCAGTACTGGCCGGCTCATAA
GGCTTACAGTTTTAGTGAACTTTCCCGGAGAATTACCAGGGAAGAATATAATATCTGGCTTAAGTATGCCAAAAAGCTAA
AAATTAACCTGATAGTTTAA

Upstream 100 bases:

>100_bases
CTTCCACAAAAAAGAAAATTGAAACCAGTAAAGAAGGGTTTAACATAATAATAGAAACTGCTTTGGCTTTTTTGGCAAAA
TATTACGGGGGTAGAAGATA

Downstream 100 bases:

>100_bases
AATTTAGGGGCTTTTAGCGGGGCTGGTTTACTGGTTCGTATATTTGTATAAACGAAGCAAATGTAATATAATTAACTGGT
AGTTTTCTTGAGGGGAGAGG

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MKPQYLLLLKTGELRERVVKLEDVLKKCTLCPHNCQVNRSRGERGFCGGGYLPVVASYGPHFGEERVLVGEHGSGTIFFS
HCTLKCVFCQNCEISQYGEGEEVTPQDLAKIMLILQRRGCHNINLVSPTHYVPAIVKAVLIAAEEGLKIPLVYNTSGYEN
VETLRLLEGIVDIYMPDIKFGDDEIGKKYAKAPGYFAITKKAVLEMDRQVGGLKFDEKGVACRGVLIRHLILPENLAKTD
KVLEFISKELSSDVAVNLMDQYWPAHKAYSFSELSRRITREEYNIWLKYAKKLKINLIV

Sequences:

>Translated_299_residues
MKPQYLLLLKTGELRERVVKLEDVLKKCTLCPHNCQVNRSRGERGFCGGGYLPVVASYGPHFGEERVLVGEHGSGTIFFS
HCTLKCVFCQNCEISQYGEGEEVTPQDLAKIMLILQRRGCHNINLVSPTHYVPAIVKAVLIAAEEGLKIPLVYNTSGYEN
VETLRLLEGIVDIYMPDIKFGDDEIGKKYAKAPGYFAITKKAVLEMDRQVGGLKFDEKGVACRGVLIRHLILPENLAKTD
KVLEFISKELSSDVAVNLMDQYWPAHKAYSFSELSRRITREEYNIWLKYAKKLKINLIV
>Mature_299_residues
MKPQYLLLLKTGELRERVVKLEDVLKKCTLCPHNCQVNRSRGERGFCGGGYLPVVASYGPHFGEERVLVGEHGSGTIFFS
HCTLKCVFCQNCEISQYGEGEEVTPQDLAKIMLILQRRGCHNINLVSPTHYVPAIVKAVLIAAEEGLKIPLVYNTSGYEN
VETLRLLEGIVDIYMPDIKFGDDEIGKKYAKAPGYFAITKKAVLEMDRQVGGLKFDEKGVACRGVLIRHLILPENLAKTD
KVLEFISKELSSDVAVNLMDQYWPAHKAYSFSELSRRITREEYNIWLKYAKKLKINLIV

Specific function: Unknown

COG id: COG1313

COG function: function code R; Uncharacterized Fe-S protein PflX, homolog of pyruvate formate lyase activating proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016431
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 33758; Mature: 33758

Theoretical pI: Translated: 8.24; Mature: 8.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPQYLLLLKTGELRERVVKLEDVLKKCTLCPHNCQVNRSRGERGFCGGGYLPVVASYGP
CCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCHHHHCCCCC
HFGEERVLVGEHGSGTIFFSHCTLKCVFCQNCEISQYGEGEEVTPQDLAKIMLILQRRGC
CCCCCEEEEECCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC
HNINLVSPTHYVPAIVKAVLIAAEEGLKIPLVYNTSGYENVETLRLLEGIVDIYMPDIKF
CCCEECCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCC
GDDEIGKKYAKAPGYFAITKKAVLEMDRQVGGLKFDEKGVACRGVLIRHLILPENLAKTD
CCHHHHHHHHCCCCEEEHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHCCCHHHHHH
KVLEFISKELSSDVAVNLMDQYWPAHKAYSFSELSRRITREEYNIWLKYAKKLKINLIV
HHHHHHHHHHCCHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEC
>Mature Secondary Structure
MKPQYLLLLKTGELRERVVKLEDVLKKCTLCPHNCQVNRSRGERGFCGGGYLPVVASYGP
CCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCHHHHCCCCC
HFGEERVLVGEHGSGTIFFSHCTLKCVFCQNCEISQYGEGEEVTPQDLAKIMLILQRRGC
CCCCCEEEEECCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC
HNINLVSPTHYVPAIVKAVLIAAEEGLKIPLVYNTSGYENVETLRLLEGIVDIYMPDIKF
CCCEECCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCC
GDDEIGKKYAKAPGYFAITKKAVLEMDRQVGGLKFDEKGVACRGVLIRHLILPENLAKTD
CCHHHHHHHHCCCCEEEHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHCCCHHHHHH
KVLEFISKELSSDVAVNLMDQYWPAHKAYSFSELSRRITREEYNIWLKYAKKLKINLIV
HHHHHHHHHHCCHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]