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The map label for this gene is yfhH [C]

Identifier: 77465813

GI number: 77465813

Start: 930774

End: 931634

Strand: Direct

Name: yfhH [C]

Synonym: RSP_1414

Alternate gene names: 77465813

Gene position: 930774-931634 (Clockwise)

Preceding gene: 77465807

Following gene: 77465814

Centisome position: 98.7

GC content: 70.27

Gene sequence:

>861_bases
ATGCAGCAGGAGACCGAGATCCGAGAGGCGCTGGCCCGTGTCGCGGCGGGCGATGCGCCGATCCTCCGGGGCTTCGCGGT
CTGGCTGCTCGACAATCTCTCGGCCGTAGCCTTCAACTCGACCCGCAGCCTCGCGGCCCTCGCCGGCACCAACCCCAACA
CGGTGACGCGGCTCGCGCGCGAGATTGGCTTCGACGGCTACGACAGTTTCCGCTCGGCTGTGCAGGAGGTCGTGCAGCGC
CGCAACATCCGCTACGGCGAGCGGGCCGAGGCGCTGCGCCACCGGTCGGAGGCCGACATCTGGGGCGAGGCGCTGACCGC
CAACCTCGGCAATATCGAGACGCTCTTCTCGGCCGAGGGCATGGACCTGCTCGAAAGCTGCGTCGAGCCGCTGCTCGCCG
CGCGCCGCGTCCATACGATCGGGGTCCGAAGCTGCTTCGGGCTTGCCCATTACTTCTCCTATGTCGGGGGGCGGGCCTTC
GCGAACTTCATCGAGGTGCCGGTGACGCCGGGCGCCATCCTCGATCAGGTCGCCTCGGCCACGCCCGAGGATATCGTGGT
CGCCATCACCTACGAGCATTATTCCGCCGAGGTGGTCCGCGCCTGCCATGTCGCGCGCAGCTGCGGGGCGCGGATCCTCG
CGCTGACCGACAGCCATTCCGCGCCGGTGGCCGAAGGCGCCTGGAAGGTGGTGCGCCTGCCCATGGCCGGGCCGCAGATC
CTGCCGTCGCTGACGGCGGCCTATATCGCGCTCGAGCTGCTCCTGTCGGCCATGGCCGCGCGCTCGCCCGATGCCGCGGC
GCGCCTTCTGGGCTTCGAGGCGCGGATGGAGCGGTTCGGCGGCTATGTCCGGCACCGCTGA

Upstream 100 bases:

>100_bases
TGATATTTCCCGACCAACGACAATGCAATTGAATTGTCTTGCCGGAGGACCTTCCTGTGGTAGCGTCCGCCGGATCCAAC
GGAATGCCGAACCGCCCGCC

Downstream 100 bases:

>100_bases
GAGCGCTCCGTGACGCGGCTCCGACCGAGGCTGGTGCATGACCGCGCTCGATGAGACTGCCTGTCCCTTCGTCCCGCGCA
TCCGCTGAACGGTCCGTCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MQQETEIREALARVAAGDAPILRGFAVWLLDNLSAVAFNSTRSLAALAGTNPNTVTRLAREIGFDGYDSFRSAVQEVVQR
RNIRYGERAEALRHRSEADIWGEALTANLGNIETLFSAEGMDLLESCVEPLLAARRVHTIGVRSCFGLAHYFSYVGGRAF
ANFIEVPVTPGAILDQVASATPEDIVVAITYEHYSAEVVRACHVARSCGARILALTDSHSAPVAEGAWKVVRLPMAGPQI
LPSLTAAYIALELLLSAMAARSPDAAARLLGFEARMERFGGYVRHR

Sequences:

>Translated_286_residues
MQQETEIREALARVAAGDAPILRGFAVWLLDNLSAVAFNSTRSLAALAGTNPNTVTRLAREIGFDGYDSFRSAVQEVVQR
RNIRYGERAEALRHRSEADIWGEALTANLGNIETLFSAEGMDLLESCVEPLLAARRVHTIGVRSCFGLAHYFSYVGGRAF
ANFIEVPVTPGAILDQVASATPEDIVVAITYEHYSAEVVRACHVARSCGARILALTDSHSAPVAEGAWKVVRLPMAGPQI
LPSLTAAYIALELLLSAMAARSPDAAARLLGFEARMERFGGYVRHR
>Mature_286_residues
MQQETEIREALARVAAGDAPILRGFAVWLLDNLSAVAFNSTRSLAALAGTNPNTVTRLAREIGFDGYDSFRSAVQEVVQR
RNIRYGERAEALRHRSEADIWGEALTANLGNIETLFSAEGMDLLESCVEPLLAARRVHTIGVRSCFGLAHYFSYVGGRAF
ANFIEVPVTPGAILDQVASATPEDIVVAITYEHYSAEVVRACHVARSCGARILALTDSHSAPVAEGAWKVVRLPMAGPQI
LPSLTAAYIALELLLSAMAARSPDAAARLLGFEARMERFGGYVRHR

Specific function: Unknown

COG id: COG1737

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SIS domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000281
- InterPro:   IPR001347
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01418 HTH_6; PF01380 SIS [H]

EC number: NA

Molecular weight: Translated: 30997; Mature: 30997

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: PS51071 HTH_RPIR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQETEIREALARVAAGDAPILRGFAVWLLDNLSAVAFNSTRSLAALAGTNPNTVTRLAR
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHEECCCHHHHHHCCCCCHHHHHHHH
EIGFDGYDSFRSAVQEVVQRRNIRYGERAEALRHRSEADIWGEALTANLGNIETLFSAEG
HHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCC
MDLLESCVEPLLAARRVHTIGVRSCFGLAHYFSYVGGRAFANFIEVPVTPGAILDQVASA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCC
TPEDIVVAITYEHYSAEVVRACHVARSCGARILALTDSHSAPVAEGAWKVVRLPMAGPQI
CCCCEEEEEEECHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHCCHHEEECCCCCHHH
LPSLTAAYIALELLLSAMAARSPDAAARLLGFEARMERFGGYVRHR
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCHHHCCC
>Mature Secondary Structure
MQQETEIREALARVAAGDAPILRGFAVWLLDNLSAVAFNSTRSLAALAGTNPNTVTRLAR
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHEECCCHHHHHHCCCCCHHHHHHHH
EIGFDGYDSFRSAVQEVVQRRNIRYGERAEALRHRSEADIWGEALTANLGNIETLFSAEG
HHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCC
MDLLESCVEPLLAARRVHTIGVRSCFGLAHYFSYVGGRAFANFIEVPVTPGAILDQVASA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCC
TPEDIVVAITYEHYSAEVVRACHVARSCGARILALTDSHSAPVAEGAWKVVRLPMAGPQI
CCCCEEEEEEECHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHCCHHEEECCCCCHHH
LPSLTAAYIALELLLSAMAARSPDAAARLLGFEARMERFGGYVRHR
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8177218; 11792842 [H]