| Definition | Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_007494 |
| Length | 943,016 |
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The map label for this gene is 77465814
Identifier: 77465814
GI number: 77465814
Start: 931960
End: 932862
Strand: Direct
Name: 77465814
Synonym: RSP_1415
Alternate gene names: NA
Gene position: 931960-932862 (Clockwise)
Preceding gene: 77465813
Following gene: 77465815
Centisome position: 98.83
GC content: 63.01
Gene sequence:
>903_bases ATGGCCAAGAAGATCTACTGCGCCTTCGGCACCGACATCGATTCGGTGGCGGGCTGGATCGGGTCCTACGGCGGCGGCGA CAGCCCTTCGGACATCCAGCGCGGCATCTTCGCCACCGAGGTGGGCATCCCGCGCCTGCTGCGGCTGTTCAGGAAATACG ACCTGCGCACCAGCTTCTTCATCCCCGGTCATTCGCTCGAGACCTTCCCGGACCAGATGAAGATGATCGTCGACCACGGC CACGAGATCGGCGCGCACGGCTATCTGCACGAGAACCCCGTCGCCATGACTGCGCAGCAGGAAGAGGATGTGCTGGTCAA GTCGATCGAGCTGATCGACAAGCTCTCCGGCCGCGCGCCGCGGGGCTATGTCGCCCCCTGGTGGGAGATGTCGGCCGCGA CCGCGGGCCTGCTGAAGAAATACGATTTCAGCTACGACCACAGTCAGGGCTACCGCGACTTCCAGCCCTTCTATGCCCGC GTCGGCGACGAATGGAACGTGATCGACTATACCAAGCAGGCGCGCGACTGGATGCATCCGCTGAAGCACGGCCACGAGAT CGACCTCGTGGACATCGCGGCCAACTGGTATGTCGACGATCTGCCGCCGATGATGTTCATGAAGAAGGCGCCGAACAGCC ACGGCTTCGTCAATCCGCGCGATATCGAGGAGATGTGGCGCGACCAGTTCGACTGGGTCTATCGCGAGATGGATTATGCC GTCTTCGCCTTCACCATCCACCCCGACGTGTCGGGCCGGCCGCAGGTGCTGCTGATGCTCGAGCGCCTGATCGAATATAT CAACGGCCACGAAGGCGTCGAATGGGCGACCTTCGAGGAGATCGCCGACGACTTCCGCGCCCGCTACCCGTTCGAGGGCA AGGAGCGGCCCGAGGTCATCTGA
Upstream 100 bases:
>100_bases GCGGGCCTGCGCCAGACCCTGCGGCACCGCTCGGTGCCTCGCCCCGGGCGGTCTGCCGCCTTCCCCCAACGCGGCCCTGC CGCCCAGACAAGGAGATCCC
Downstream 100 bases:
>100_bases AACCGGAGCGGAGGCCCGACCATGTGCAGCGCCTGCGGCTTTCCCGCGGCCCCCGGACACTGGACCGACGCCGGGGCCGC GACCCCCGGCGAGCGGCTGC
Product: putative polysaccharide deacetylase
Products: NA
Alternate protein names: Polysaccharide Deacetylase Family Protein; Xylanase/Chitin Deacetylase; Polysaccharide Deacetylase Domain Protein; Hydrolase; Polysaccharide Deacetylase Domain-Containing Protein; Saccharide Deacetylase Slightly; Cyclic Imide Hydrolase; Deacetylase; Urate Catabolism Protein
Number of amino acids: Translated: 300; Mature: 299
Protein sequence:
>300_residues MAKKIYCAFGTDIDSVAGWIGSYGGGDSPSDIQRGIFATEVGIPRLLRLFRKYDLRTSFFIPGHSLETFPDQMKMIVDHG HEIGAHGYLHENPVAMTAQQEEDVLVKSIELIDKLSGRAPRGYVAPWWEMSAATAGLLKKYDFSYDHSQGYRDFQPFYAR VGDEWNVIDYTKQARDWMHPLKHGHEIDLVDIAANWYVDDLPPMMFMKKAPNSHGFVNPRDIEEMWRDQFDWVYREMDYA VFAFTIHPDVSGRPQVLLMLERLIEYINGHEGVEWATFEEIADDFRARYPFEGKERPEVI
Sequences:
>Translated_300_residues MAKKIYCAFGTDIDSVAGWIGSYGGGDSPSDIQRGIFATEVGIPRLLRLFRKYDLRTSFFIPGHSLETFPDQMKMIVDHG HEIGAHGYLHENPVAMTAQQEEDVLVKSIELIDKLSGRAPRGYVAPWWEMSAATAGLLKKYDFSYDHSQGYRDFQPFYAR VGDEWNVIDYTKQARDWMHPLKHGHEIDLVDIAANWYVDDLPPMMFMKKAPNSHGFVNPRDIEEMWRDQFDWVYREMDYA VFAFTIHPDVSGRPQVLLMLERLIEYINGHEGVEWATFEEIADDFRARYPFEGKERPEVI >Mature_299_residues AKKIYCAFGTDIDSVAGWIGSYGGGDSPSDIQRGIFATEVGIPRLLRLFRKYDLRTSFFIPGHSLETFPDQMKMIVDHGH EIGAHGYLHENPVAMTAQQEEDVLVKSIELIDKLSGRAPRGYVAPWWEMSAATAGLLKKYDFSYDHSQGYRDFQPFYARV GDEWNVIDYTKQARDWMHPLKHGHEIDLVDIAANWYVDDLPPMMFMKKAPNSHGFVNPRDIEEMWRDQFDWVYREMDYAV FAFTIHPDVSGRPQVLLMLERLIEYINGHEGVEWATFEEIADDFRARYPFEGKERPEVI
Specific function: Unknown
COG id: COG0726
COG function: function code G; Predicted xylanase/chitin deacetylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34769; Mature: 34637
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKKIYCAFGTDIDSVAGWIGSYGGGDSPSDIQRGIFATEVGIPRLLRLFRKYDLRTSFF CCCEEEEEECCCHHHHHHHHHCCCCCCCHHHHHHCHHHHHCCHHHHHHHHHHHCCCEEEE IPGHSLETFPDQMKMIVDHGHEIGAHGYLHENPVAMTAQQEEDVLVKSIELIDKLSGRAP ECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCC RGYVAPWWEMSAATAGLLKKYDFSYDHSQGYRDFQPFYARVGDEWNVIDYTKQARDWMHP CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHH LKHGHEIDLVDIAANWYVDDLPPMMFMKKAPNSHGFVNPRDIEEMWRDQFDWVYREMDYA HHCCCCEEEEEEECCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCEE VFAFTIHPDVSGRPQVLLMLERLIEYINGHEGVEWATFEEIADDFRARYPFEGKERPEVI EEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure AKKIYCAFGTDIDSVAGWIGSYGGGDSPSDIQRGIFATEVGIPRLLRLFRKYDLRTSFF CCEEEEEECCCHHHHHHHHHCCCCCCCHHHHHHCHHHHHCCHHHHHHHHHHHCCCEEEE IPGHSLETFPDQMKMIVDHGHEIGAHGYLHENPVAMTAQQEEDVLVKSIELIDKLSGRAP ECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCC RGYVAPWWEMSAATAGLLKKYDFSYDHSQGYRDFQPFYARVGDEWNVIDYTKQARDWMHP CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHH LKHGHEIDLVDIAANWYVDDLPPMMFMKKAPNSHGFVNPRDIEEMWRDQFDWVYREMDYA HHCCCCEEEEEEECCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCEE VFAFTIHPDVSGRPQVLLMLERLIEYINGHEGVEWATFEEIADDFRARYPFEGKERPEVI EEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA