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The map label for this gene is ybgL [C]

Identifier: 77465456

GI number: 77465456

Start: 524145

End: 524915

Strand: Direct

Name: ybgL [C]

Synonym: RSP_3454

Alternate gene names: 77465456

Gene position: 524145-524915 (Clockwise)

Preceding gene: 77465444

Following gene: 77465457

Centisome position: 55.58

GC content: 68.74

Gene sequence:

>771_bases
ATGGTGAAAAGGATCGATCTCAACTGCGACATGGGCGAGAGCTTCGGCGCCTATGTGATGGGCGACGACGCAGGCATGCT
GGAGCTGGTGACCTCGGCCAATATCGCCTGCGGATTCCATGCAGGCGACCCGGTGGTGATGCGTCGGACGATCCGCATGG
CCAGGGAAAAGGGCGTGTCGGTGGGGGCGCATCCCTCCTTCGCCGATCTCTACGGGTTCGGCCGGCGGCGGATCTCGGGC
GAGCGGCCCGAGGATCTCGAGACGCAGCTCATCTTCCAGATCGTCGCGATGCAGGGCATGGCCGCGCTCGAGGGCCATCC
GATGACCCATGTGAAGACCCATGGCGCGCTCGGCAACATGGCGGCGGTCGATCCCGACCTCGCCGCGCTCTGCGTCCGGG
CGATCCGGGCGGTCGATCCGGGCCTCGTCTTCGTGACGCTGCCCTATTCCGAGACCTTCCGCGCCGCCGAGGCCGCGGGC
CTCCGGGTCGCCTGCGAGATCTATGCCGACCGCAGCTATACGGATGCGGGCGAGCTTACCCCGCGCAGCCAGCCCGGCGC
GGTGATCCACGACCCCGAGCAGAGCCTCGCGCAGGTGCTCGAGATGGTGGTGAACGGCCACATTCCCACGACGGGCGGCA
AGCGGCTGCCGGTCAGCCCCGACACGCTCTGCATCCACGGCGATACCGCGGGCGCGGTCGCCATTGCCCGCCGCCTGCGC
AGCGCCCTCGAAGAGAACGGCATCGCCATCGCGCCGTTCGCCCAAGCCTGA

Upstream 100 bases:

>100_bases
AGCGGCCCGGCGCGATCTGTCAATCCTCCGGGCCGGACCGCCGAAAGAAACATCCGAAATCTCGGAAAATGCTGAAAAAC
TTCGCAGGACAGGGCTGGGA

Downstream 100 bases:

>100_bases
AGGATCCGACCATGACCCGCACCCTCTATCTCAACGGCGCCTGGTTGCCCGAATCGGAGGCCAAGGTTTCGGTCTTCGAC
CGCGGCTTCCTCATGGCGGA

Product: LamB/YcsF family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MVKRIDLNCDMGESFGAYVMGDDAGMLELVTSANIACGFHAGDPVVMRRTIRMAREKGVSVGAHPSFADLYGFGRRRISG
ERPEDLETQLIFQIVAMQGMAALEGHPMTHVKTHGALGNMAAVDPDLAALCVRAIRAVDPGLVFVTLPYSETFRAAEAAG
LRVACEIYADRSYTDAGELTPRSQPGAVIHDPEQSLAQVLEMVVNGHIPTTGGKRLPVSPDTLCIHGDTAGAVAIARRLR
SALEENGIAIAPFAQA

Sequences:

>Translated_256_residues
MVKRIDLNCDMGESFGAYVMGDDAGMLELVTSANIACGFHAGDPVVMRRTIRMAREKGVSVGAHPSFADLYGFGRRRISG
ERPEDLETQLIFQIVAMQGMAALEGHPMTHVKTHGALGNMAAVDPDLAALCVRAIRAVDPGLVFVTLPYSETFRAAEAAG
LRVACEIYADRSYTDAGELTPRSQPGAVIHDPEQSLAQVLEMVVNGHIPTTGGKRLPVSPDTLCIHGDTAGAVAIARRLR
SALEENGIAIAPFAQA
>Mature_256_residues
MVKRIDLNCDMGESFGAYVMGDDAGMLELVTSANIACGFHAGDPVVMRRTIRMAREKGVSVGAHPSFADLYGFGRRRISG
ERPEDLETQLIFQIVAMQGMAALEGHPMTHVKTHGALGNMAAVDPDLAALCVRAIRAVDPGLVFVTLPYSETFRAAEAAG
LRVACEIYADRSYTDAGELTPRSQPGAVIHDPEQSLAQVLEMVVNGHIPTTGGKRLPVSPDTLCIHGDTAGAVAIARRLR
SALEENGIAIAPFAQA

Specific function: Unknown

COG id: COG1540

COG function: function code R; Uncharacterized proteins, homologs of lactam utilization protein B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0271 (lamB) family [H]

Homologues:

Organism=Escherichia coli, GI1786931, Length=248, Percent_Identity=47.1774193548387, Blast_Score=213, Evalue=1e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR005501 [H]

Pfam domain/function: PF03746 LamB_YcsF [H]

EC number: NA

Molecular weight: Translated: 27225; Mature: 27225

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKRIDLNCDMGESFGAYVMGDDAGMLELVTSANIACGFHAGDPVVMRRTIRMAREKGVS
CCEEEECCCCCCCCCCCEEEECCCCCEEHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCC
VGAHPSFADLYGFGRRRISGERPEDLETQLIFQIVAMQGMAALEGHPMTHVKTHGALGNM
CCCCCCHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHCHHHHCCCCCCEEECCCCCCCC
AAVDPDLAALCVRAIRAVDPGLVFVTLPYSETFRAAEAAGLRVACEIYADRSYTDAGELT
CCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCEEEEEEEECCCCCCCCCCC
PRSQPGAVIHDPEQSLAQVLEMVVNGHIPTTGGKRLPVSPDTLCIHGDTAGAVAIARRLR
CCCCCCCEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHH
SALEENGIAIAPFAQA
HHHHHCCEEEECCCCC
>Mature Secondary Structure
MVKRIDLNCDMGESFGAYVMGDDAGMLELVTSANIACGFHAGDPVVMRRTIRMAREKGVS
CCEEEECCCCCCCCCCCEEEECCCCCEEHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCC
VGAHPSFADLYGFGRRRISGERPEDLETQLIFQIVAMQGMAALEGHPMTHVKTHGALGNM
CCCCCCHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHCHHHHCCCCCCEEECCCCCCCC
AAVDPDLAALCVRAIRAVDPGLVFVTLPYSETFRAAEAAGLRVACEIYADRSYTDAGELT
CCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCEEEEEEEECCCCCCCCCCC
PRSQPGAVIHDPEQSLAQVLEMVVNGHIPTTGGKRLPVSPDTLCIHGDTAGAVAIARRLR
CCCCCCCEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHH
SALEENGIAIAPFAQA
HHHHHCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA