| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is 77461730
Identifier: 77461730
GI number: 77461730
Start: 6174754
End: 6175920
Strand: Direct
Name: 77461730
Synonym: Pfl01_5509
Alternate gene names: NA
Gene position: 6174754-6175920 (Clockwise)
Preceding gene: 77461729
Following gene: 77461731
Centisome position: 95.91
GC content: 54.16
Gene sequence:
>1167_bases ATGAAAAACGTCTATTTGATCAGCAATGTCACCCGTGGCGGAAAAACCTACCTCGAATACCTGATCCCGGCGCTCAATGC CCTGCGCCACGCCTACAACTGCATCGTGCTGCAGACCGACAAGACCGGCCTGAGCAGGCAGGAGGCAGAAGAGATCCTTG ACTATCCGGTTGAGCAGGTTGAAGTCGAAGTCATCGCGAACCTGGCCTCGCAAGTCGTCATTTCAAACGATGCCTGGATT GGCCGACTGCTCGACGATTCGAACTTCGGTATTTTCCTGACCCACGGCAATGTGGGAATGCCGACCAAAGACAAGTATTA CTACGCCGAACTGACGTCCTATTGGGATGTGGTCATTTCTTCGTCCCGATCGGGTTTTGATCTGATCAGATCGGGCCTGC AACGCTACAGACCCGACAGAAAGGCCCTGAAATCGCTGATTGCCGATGGCATAGCCTTGCGCTCCGACCTGCGCAAGACC AGTCCGGTCGCGACTCTGCCCATCAAGGTTCCGAAATTCTTTGAATCCGCTCCCGGGTCAAACAAGGCGTCGGATGATTT CGTTGTCGGACTGCTGCCGACCCAACTGGGAATCTGCCCAAGCGGCGCCTCCCTGTACGAGAACCTGCAAACCGTGATCA ACGCGGTCAAATCACAGATCCCTCACGCCCGGTTCATCCTGCGTCCGTACATGGCCGACCTTCAGCATCCAACCCTGAAG GACCTGTGCAACCAGCTCTCGGCGTATGAATGGATCACCATCGACACGACGGGCACCAGCAGCACGGTTTTCTACCAGCA GTGCGACACCATCATTACCGATGCCTCGACCGGCGGTGTCTCGTTCATGCTCAACACGTGCAGGCTGCCAATCTATTACG TTCCGACGACCGACGAGTCCAACCCGACCGTCGACGTCTGGTTGCAGCAAATGAACAACTTGCTGCCCATCGCCAAGAAC GGCGAAGAACTCAAAGAGCTGGCACTCGGTTTCAGCCTGATGTCCCCTGAAGACTGCTACTTCATTTACAAGAAGTTCTA TGAGAGTCAATACAGCAACTTGCCATTACCGCAGGATGTGTTTCACGACTTGATTGAAAACAGGCACGACTCGATGTTCT GCCAACTAACCATCGACTCTTTTGGCAACATCAAAGAACGTGACTGA
Upstream 100 bases:
>100_bases CAATGGCGAACGCGTCAAGACAATATCAATCAGTTGTCTACGCGCAATCCAGCTGATCCAACTTTTTTGCCACGGCAAAT TTTAAAAGTACAAGTCAATA
Downstream 100 bases:
>100_bases ATACTTGTATCGCGTATTGAACCGGTGCAGGTTCATCACGCCAGGTATCCAAACCGGACACTGGTCAGAATGCTATGAAA TGTAACCCTCACGCGCAGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 388; Mature: 388
Protein sequence:
>388_residues MKNVYLISNVTRGGKTYLEYLIPALNALRHAYNCIVLQTDKTGLSRQEAEEILDYPVEQVEVEVIANLASQVVISNDAWI GRLLDDSNFGIFLTHGNVGMPTKDKYYYAELTSYWDVVISSSRSGFDLIRSGLQRYRPDRKALKSLIADGIALRSDLRKT SPVATLPIKVPKFFESAPGSNKASDDFVVGLLPTQLGICPSGASLYENLQTVINAVKSQIPHARFILRPYMADLQHPTLK DLCNQLSAYEWITIDTTGTSSTVFYQQCDTIITDASTGGVSFMLNTCRLPIYYVPTTDESNPTVDVWLQQMNNLLPIAKN GEELKELALGFSLMSPEDCYFIYKKFYESQYSNLPLPQDVFHDLIENRHDSMFCQLTIDSFGNIKERD
Sequences:
>Translated_388_residues MKNVYLISNVTRGGKTYLEYLIPALNALRHAYNCIVLQTDKTGLSRQEAEEILDYPVEQVEVEVIANLASQVVISNDAWI GRLLDDSNFGIFLTHGNVGMPTKDKYYYAELTSYWDVVISSSRSGFDLIRSGLQRYRPDRKALKSLIADGIALRSDLRKT SPVATLPIKVPKFFESAPGSNKASDDFVVGLLPTQLGICPSGASLYENLQTVINAVKSQIPHARFILRPYMADLQHPTLK DLCNQLSAYEWITIDTTGTSSTVFYQQCDTIITDASTGGVSFMLNTCRLPIYYVPTTDESNPTVDVWLQQMNNLLPIAKN GEELKELALGFSLMSPEDCYFIYKKFYESQYSNLPLPQDVFHDLIENRHDSMFCQLTIDSFGNIKERD >Mature_388_residues MKNVYLISNVTRGGKTYLEYLIPALNALRHAYNCIVLQTDKTGLSRQEAEEILDYPVEQVEVEVIANLASQVVISNDAWI GRLLDDSNFGIFLTHGNVGMPTKDKYYYAELTSYWDVVISSSRSGFDLIRSGLQRYRPDRKALKSLIADGIALRSDLRKT SPVATLPIKVPKFFESAPGSNKASDDFVVGLLPTQLGICPSGASLYENLQTVINAVKSQIPHARFILRPYMADLQHPTLK DLCNQLSAYEWITIDTTGTSSTVFYQQCDTIITDASTGGVSFMLNTCRLPIYYVPTTDESNPTVDVWLQQMNNLLPIAKN GEELKELALGFSLMSPEDCYFIYKKFYESQYSNLPLPQDVFHDLIENRHDSMFCQLTIDSFGNIKERD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43671; Mature: 43671
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNVYLISNVTRGGKTYLEYLIPALNALRHAYNCIVLQTDKTGLSRQEAEEILDYPVEQV CCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHCCHHHH EVEVIANLASQVVISNDAWIGRLLDDSNFGIFLTHGNVGMPTKDKYYYAELTSYWDVVIS HHHHHHHHHHHEEECCCCEEEEEEECCCCEEEEEECCCCCCCCCCEEEHHHHHHHHHHHC SSRSGFDLIRSGLQRYRPDRKALKSLIADGIALRSDLRKTSPVATLPIKVPKFFESAPGS CCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHCCCCC NKASDDFVVGLLPTQLGICPSGASLYENLQTVINAVKSQIPHARFILRPYMADLQHPTLK CCCCCCEEEEEECHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHH DLCNQLSAYEWITIDTTGTSSTVFYQQCDTIITDASTGGVSFMLNTCRLPIYYVPTTDES HHHHHHCCCEEEEEECCCCCCEEHHHHHCHHEECCCCCCHHEEEHHCCCEEEEECCCCCC NPTVDVWLQQMNNLLPIAKNGEELKELALGFSLMSPEDCYFIYKKFYESQYSNLPLPQDV CCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHH FHDLIENRHDSMFCQLTIDSFGNIKERD HHHHHHCCCCCEEEEEEECCCCCCCCCC >Mature Secondary Structure MKNVYLISNVTRGGKTYLEYLIPALNALRHAYNCIVLQTDKTGLSRQEAEEILDYPVEQV CCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHCCHHHH EVEVIANLASQVVISNDAWIGRLLDDSNFGIFLTHGNVGMPTKDKYYYAELTSYWDVVIS HHHHHHHHHHHEEECCCCEEEEEEECCCCEEEEEECCCCCCCCCCEEEHHHHHHHHHHHC SSRSGFDLIRSGLQRYRPDRKALKSLIADGIALRSDLRKTSPVATLPIKVPKFFESAPGS CCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHCCCCC NKASDDFVVGLLPTQLGICPSGASLYENLQTVINAVKSQIPHARFILRPYMADLQHPTLK CCCCCCEEEEEECHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHH DLCNQLSAYEWITIDTTGTSSTVFYQQCDTIITDASTGGVSFMLNTCRLPIYYVPTTDES HHHHHHCCCEEEEEECCCCCCEEHHHHHCHHEECCCCCCHHEEEHHCCCEEEEECCCCCC NPTVDVWLQQMNNLLPIAKNGEELKELALGFSLMSPEDCYFIYKKFYESQYSNLPLPQDV CCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHH FHDLIENRHDSMFCQLTIDSFGNIKERD HHHHHHCCCCCEEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA