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The map label for this gene is yifB [H]

Identifier: 77461729

GI number: 77461729

Start: 6172892

End: 6174385

Strand: Direct

Name: yifB [H]

Synonym: Pfl01_5508

Alternate gene names: 77461729

Gene position: 6172892-6174385 (Clockwise)

Preceding gene: 77461728

Following gene: 77461730

Centisome position: 95.88

GC content: 64.12

Gene sequence:

>1494_bases
ATGTCCCTCGCCATCGTCCACAGCCGCGCCCAGATAGGCGTGGATGCCCCCGCCGTCACCGTCGAAGTTCACCTGGCCAA
CGGCTTGCCCTCGCTGACCATGGTCGGCCTGCCCGAAGCGGCAGTGAAGGAGAGCAAGGACCGGGTGCGCAGTGCGATCA
TCAATTCCGGGCTGCAGTTTCCGGCGCGGCGGATCACCTTGAATCTGGCGCCGGCGGATCTGCCCAAGGATGGCGGGCGG
TTCGATCTGGCGATTGCGCTGGGAATTCTGTCGGCGAGTGTGCAGGTGCCGACGTTGACCCTGGATGACGTGGAATGCCT
GGGTGAGCTGGCGTTATCCGGTGCAGTGCGGGCGGTGCGTGGGGTGTTGCCAGCGGCGCTGGCGGCGCGCAAGGCAGGGC
GGACGCTGGTGGTGCCGCGGGCGAATGCCGAGGAGGCGTGTCTGGCGTCAGGACTGAGGGTGATCGCAGTGGATCATCTG
CTGGAGGCTGTGGCGCATTTCAACGGGCATACACCGGTCGAGCCTTATGTCTCGGATGGGTTGATCCATGCCGCCAAACC
CTATCCCGACTTGAATGAGGTACAGGGCCAACTGGCCGCCAAACGGGCGCTGCTGATTGCCGCCGCCGGTGCGCACAATC
TGCTGTTCAGCGGGCCACCGGGGACGGGCAAGACGTTGCTGGCCAGCCGATTACCGGGATTGCTGCCACCGCTGGCCGAG
AGTGAAGCGCTGGAAGTGGCGGCGATTCAATCCGTCGCCAGCGGCGCACCGTTGACCCACTGGCCGCAGCGCCCGTTCCG
CCAACCGCATCACTCGGCCTCCGGGCCGGCATTGGTCGGCGGCAGTTCAAAACCGCAACCCGGTGAAATCACCCTCGCCC
ATCACGGCGTGCTGTTTCTCGATGAGCTACCCGAGTTTGATCGCAAGGTGTTGGAGGTTCTGCGCGAACCGCTGGAATCC
GGCTGCATCGTGATCGCAAGGGCCAAGGAACGGGTGCGGTTTCCCGCGAGATTCCAGCTGGTCGCGGCGATGAACCCCTG
CCCCTGTGGATATCTTGGCGAACCGAGCGGCAAGTGCTCGTGCACGCCGGACATGGTGCAGCGCTATCGCAACAAACTGT
CGGGGCCGTTGCTGGACCGGATCGATTTGCACCTGACGGTGGCGCGGGAGGCCACAGCGTTGAACCCTGCGGTGAAACCG
GGAGAGGACAGCGCCAGCGCGGCCACGCGGGTCGCCGAGGCCCGCGAGCGTCAGCAAAAACGTCAGGGCTGTGCCAATGC
GTTTCTCGATTTGCCGGGGCTGAAGAAGCACTGCAAGTTATCCACAGCCGATGAAACCTGGCTGGAGTCAGCCTGTGAGC
GACTGACCCTGTCGCTGCGTTCAGCACATCGGCTGCTCAAGGTTGCACGGACACTGGCCGATATAGAGAAGGTTGATGCC
ATATCACGTGAGCATCTGGCCGAAGCGCTGCAATATCGCCCAGCGACGCAATGA

Upstream 100 bases:

>100_bases
GTGAAGGTTTGCCCAGGCAGCCGTCCCTCCAACTCTCTCCTCCCCGACTACCCTTAAAAAACCGCAGGAAGCGGCCCCCG
ATTCAACTCAAGGAACGACC

Downstream 100 bases:

>100_bases
CGGGATGGACAGGCAGCTTACAGGCGACCTGTGCCAGCTGAAAATAAAGTCCGCGCGCGCTGATAGCCATTAGCCAAGAT
GTGATATAACGACGGCGCTT

Product: Mg chelatase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 497; Mature: 496

Protein sequence:

>497_residues
MSLAIVHSRAQIGVDAPAVTVEVHLANGLPSLTMVGLPEAAVKESKDRVRSAIINSGLQFPARRITLNLAPADLPKDGGR
FDLAIALGILSASVQVPTLTLDDVECLGELALSGAVRAVRGVLPAALAARKAGRTLVVPRANAEEACLASGLRVIAVDHL
LEAVAHFNGHTPVEPYVSDGLIHAAKPYPDLNEVQGQLAAKRALLIAAAGAHNLLFSGPPGTGKTLLASRLPGLLPPLAE
SEALEVAAIQSVASGAPLTHWPQRPFRQPHHSASGPALVGGSSKPQPGEITLAHHGVLFLDELPEFDRKVLEVLREPLES
GCIVIARAKERVRFPARFQLVAAMNPCPCGYLGEPSGKCSCTPDMVQRYRNKLSGPLLDRIDLHLTVAREATALNPAVKP
GEDSASAATRVAEARERQQKRQGCANAFLDLPGLKKHCKLSTADETWLESACERLTLSLRSAHRLLKVARTLADIEKVDA
ISREHLAEALQYRPATQ

Sequences:

>Translated_497_residues
MSLAIVHSRAQIGVDAPAVTVEVHLANGLPSLTMVGLPEAAVKESKDRVRSAIINSGLQFPARRITLNLAPADLPKDGGR
FDLAIALGILSASVQVPTLTLDDVECLGELALSGAVRAVRGVLPAALAARKAGRTLVVPRANAEEACLASGLRVIAVDHL
LEAVAHFNGHTPVEPYVSDGLIHAAKPYPDLNEVQGQLAAKRALLIAAAGAHNLLFSGPPGTGKTLLASRLPGLLPPLAE
SEALEVAAIQSVASGAPLTHWPQRPFRQPHHSASGPALVGGSSKPQPGEITLAHHGVLFLDELPEFDRKVLEVLREPLES
GCIVIARAKERVRFPARFQLVAAMNPCPCGYLGEPSGKCSCTPDMVQRYRNKLSGPLLDRIDLHLTVAREATALNPAVKP
GEDSASAATRVAEARERQQKRQGCANAFLDLPGLKKHCKLSTADETWLESACERLTLSLRSAHRLLKVARTLADIEKVDA
ISREHLAEALQYRPATQ
>Mature_496_residues
SLAIVHSRAQIGVDAPAVTVEVHLANGLPSLTMVGLPEAAVKESKDRVRSAIINSGLQFPARRITLNLAPADLPKDGGRF
DLAIALGILSASVQVPTLTLDDVECLGELALSGAVRAVRGVLPAALAARKAGRTLVVPRANAEEACLASGLRVIAVDHLL
EAVAHFNGHTPVEPYVSDGLIHAAKPYPDLNEVQGQLAAKRALLIAAAGAHNLLFSGPPGTGKTLLASRLPGLLPPLAES
EALEVAAIQSVASGAPLTHWPQRPFRQPHHSASGPALVGGSSKPQPGEITLAHHGVLFLDELPEFDRKVLEVLREPLESG
CIVIARAKERVRFPARFQLVAAMNPCPCGYLGEPSGKCSCTPDMVQRYRNKLSGPLLDRIDLHLTVAREATALNPAVKPG
EDSASAATRVAEARERQQKRQGCANAFLDLPGLKKHCKLSTADETWLESACERLTLSLRSAHRLLKVARTLADIEKVDAI
SREHLAEALQYRPATQ

Specific function: Unknown

COG id: COG0606

COG function: function code O; Predicted ATPase with chaperone activity

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Mg-chelatase subunits D/I family. ComM subfamily [H]

Homologues:

Organism=Escherichia coli, GI145693202, Length=496, Percent_Identity=54.0322580645161, Blast_Score=512, Evalue=1e-146,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR004482
- InterPro:   IPR000523
- InterPro:   IPR020568 [H]

Pfam domain/function: PF01078 Mg_chelatase [H]

EC number: NA

Molecular weight: Translated: 52827; Mature: 52695

Theoretical pI: Translated: 8.29; Mature: 8.29

Prosite motif: PS50051 MCM_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLAIVHSRAQIGVDAPAVTVEVHLANGLPSLTMVGLPEAAVKESKDRVRSAIINSGLQF
CCEEEEECCHHCCCCCCEEEEEEEECCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCC
PARRITLNLAPADLPKDGGRFDLAIALGILSASVQVPTLTLDDVECLGELALSGAVRAVR
CCEEEEEEECCCCCCCCCCCEEHHHHHHHHHCCEECCEEEHHHHHHHHHHHHHHHHHHHH
GVLPAALAARKAGRTLVVPRANAEEACLASGLRVIAVDHLLEAVAHFNGHTPVEPYVSDG
HHHHHHHHHHHCCCEEEEECCCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHCC
LIHAAKPYPDLNEVQGQLAAKRALLIAAAGAHNLLFSGPPGTGKTLLASRLPGLLPPLAE
EEECCCCCCCHHHHHHHHHHHHHHEEEECCCCCCEEECCCCCCHHHHHHHCCCCCCCCCC
SEALEVAAIQSVASGAPLTHWPQRPFRQPHHSASGPALVGGSSKPQPGEITLAHHGVLFL
CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCEEEEEECCEEEE
DELPEFDRKVLEVLREPLESGCIVIARAKERVRFPARFQLVAAMNPCPCGYLGEPSGKCS
HHCCHHHHHHHHHHHHHHHCCCEEEEECHHHCCCCHHEEEEEECCCCCCCCCCCCCCCCC
CTPDMVQRYRNKLSGPLLDRIDLHLTVAREATALNPAVKPGEDSASAATRVAEARERQQK
CCHHHHHHHHHHHCCCCHHHHEEEEEEECHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
RQGCANAFLDLPGLKKHCKLSTADETWLESACERLTLSLRSAHRLLKVARTLADIEKVDA
HHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISREHLAEALQYRPATQ
HHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SLAIVHSRAQIGVDAPAVTVEVHLANGLPSLTMVGLPEAAVKESKDRVRSAIINSGLQF
CEEEEECCHHCCCCCCEEEEEEEECCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCC
PARRITLNLAPADLPKDGGRFDLAIALGILSASVQVPTLTLDDVECLGELALSGAVRAVR
CCEEEEEEECCCCCCCCCCCEEHHHHHHHHHCCEECCEEEHHHHHHHHHHHHHHHHHHHH
GVLPAALAARKAGRTLVVPRANAEEACLASGLRVIAVDHLLEAVAHFNGHTPVEPYVSDG
HHHHHHHHHHHCCCEEEEECCCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHCC
LIHAAKPYPDLNEVQGQLAAKRALLIAAAGAHNLLFSGPPGTGKTLLASRLPGLLPPLAE
EEECCCCCCCHHHHHHHHHHHHHHEEEECCCCCCEEECCCCCCHHHHHHHCCCCCCCCCC
SEALEVAAIQSVASGAPLTHWPQRPFRQPHHSASGPALVGGSSKPQPGEITLAHHGVLFL
CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCEEEEEECCEEEE
DELPEFDRKVLEVLREPLESGCIVIARAKERVRFPARFQLVAAMNPCPCGYLGEPSGKCS
HHCCHHHHHHHHHHHHHHHCCCEEEEECHHHCCCCHHEEEEEECCCCCCCCCCCCCCCCC
CTPDMVQRYRNKLSGPLLDRIDLHLTVAREATALNPAVKPGEDSASAATRVAEARERQQK
CCHHHHHHHHHHHCCCCHHHHEEEEEEECHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
RQGCANAFLDLPGLKKHCKLSTADETWLESACERLTLSLRSAHRLLKVARTLADIEKVDA
HHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISREHLAEALQYRPATQ
HHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1995430; 1379743; 9278503 [H]