| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is quiP [H]
Identifier: 77461619
GI number: 77461619
Start: 6059650
End: 6062061
Strand: Direct
Name: quiP [H]
Synonym: Pfl01_5398
Alternate gene names: 77461619
Gene position: 6059650-6062061 (Clockwise)
Preceding gene: 77461615
Following gene: 77461621
Centisome position: 94.12
GC content: 64.39
Gene sequence:
>2412_bases ATGAAAAAAGGCCTGACCGTACTTGCGTTGCTGATCGTCATTCCCGCCATCGGGGTCGGCGGTTACCTCTACAGCAAGCA ACCGACGCGTCAGGGCCAGGTGGAGTTACGCAACCTGCAAGGCTCGGTGACCGTGCGTTACGACGAGCGCGGAGTGCCGC ACATCCGGGCCGAAAACGAGATCGACCTCTACCGCGCCCTCGGCTATGTGCACGCCCAGGACCGACTGTTCCAGATGGAG GCCATGCGCCGTCTCGCCCGTGGCGAACTGGCCGAAGTGCTCGGGCCGAAACTGCTCGACACCGACAAGTTGTTCCGCAG CCTGCGCATCCGCGAGCGGGCCGCCAGTTACGTGGCCGGCCTCGACAAGCAGTCGCCCGCGTGGAAAGGCCTGCAAGCCT ATCTGGACGGCATTAACCAGTATCAGGACTCGCACGCCGCCCCCGTCGAGTTCGACGTGCTGGGCATCCCCAAGCGGCCG TTCACCGCCGAGGACAGCATCAGCGTCGCCGGCTACATGGCCTACAGCTTTGCCGCCGCGTTTCGCACCGAACCGCTCCT GACCTACGTACGCGATCAACTGGGCGCCGATTACCTCAACGTGTTCGACCTCGACTGGCAACCCAAGGGCGTGCTCGCCA AGGGCCACGCCGGCACCGCACCGGCCCTCGCTGCCGAAGACTGGAAAGACCTGAACACCCTCGCCCGCGTCAGCGAGCAG GCATTGATCGACAACGGTCTGCCGCAGTTCGAAGGCAGCAACGCCTGGGTGATCGCCGGCAGCCACAGCAAGAGCGCCAA GCCTTTGCTGGCCGGCGATCCGCACATTCGTTTTTCGGTGCCGTCGGTGTGGTACGAGGCGCAGTTGTCGGCGCCGGGTT TTGAACTCTACGGCCATCATCAGGCGCTGGTGCCGTTCGCGTTTCTCGGCCACAACCTGGATTTCGGCTGGAGCCTGACC ATGTTCCAGAACGACGACCTCGATCTGATCGCCGAGAAGGTCAATCCGGACAACCCGGATCAGGTCTGGTATCGCGGCCA GTGGACCGACATGGTCAAGACCGAGCAGCAGATCGCGGTGAAAGGCCAGGCCCCGATGTCCATCACGTTGCGCCAGTCGC CCCACGGCCCAATCGTCAACGACGCCCTCGGTACAGCCGCAGGGAAAACCCCGATTGCGATGTGGTGGGCGTTCCTCGAA ACACCGAACCCGATCCTCGAAGGTTTTTACCAGCTCAACCGCGCCGACACCCTGGCCAAGGCCCGCGCCGCAGCGGCCAA GGTGCAGGCACCGGGGCTGAACATCGTCTACGCCAACGCCAAGGGCGATATCGCGTGGTGGGCCTCGGCGCTGCTGCCCA AACGGCCGGCCGGGGTGAAGCCTGGGTTCATTCTCGACGGCAGCGGCAATCAGGCGGACAAGGACGGCTACTTCCCGTTC AGCGCCAACCCGCAGGAAGAGAACCCGGCGCGGGGCTATATCGTCTCGGCCAACTTCCAGCCCGTGTCGCCGACCGGCAT GGAGATTCCCGGTTATTACAACCTCGCCGACCGTGGCCAGCAGCTCAACCGCCAGCTCGCCGACAAGAACGTGAAATGGG ACAACGAGGCCAACCAGAAGCTGCAACTGGGCACCACCACCGGTTACGGTCCGCGTCTGCTGGCGCCGTTGCTGCCGGTG CTGCGTGAAGTGGCGGGCAATCCCGCCGAGCAGAAGCTGATCGAGCAACTGGCCCAGTGGCAAGGCGACTATCCGCTGGA TTCGGTCAGTGCGACGGTGTTCAACCAGTTCCTGTTCAACCTCGCCGACGCGGCAATGCGCGATGAGCTGGGCAATGATT TCTTCGAAACCCTGCTGTCGACCCGGGTGATCGATGCGGCACTGCCCCGGCTCGCGGCGAATGCCGATTCACCGTGGTGG GACAACCGCAGCACGCCGAACAAGGAGACCCGCGTCGACACCGTGCGCGCCGCGTGGCAGGCGAGCATGGCCCACCTGAA GTCGACCCTCGGCGACGACGCTTCCGGCTGGCAATGGGGCAAGGCGCATACGCTGACCCATGGTCATCCGCTGGGTCAGC AGAAGCCGCTGGATCGCATTTTCAACGTCGGCCCCTTCGCCGCACCGGGCTCCCATGAAGTGCCGAACAACCTCTCGGCG AAGATCGGCCCGGCGCCGTGGCCGGTGACCTACGGCCCGTCGACCCGGCGCTTGGTGGACTTCGCTGATCCGGCTCACAG CCTGACCATCAACCCGGTGGGCCAGAGCGGCGTGCCGTTCGACAGCCACTATGACGATCAGGCAGAGGCGTATGTGGACG GGATGTATGTGCAGGCGCATTTCAGTGAGGAAGAGGTGACGGCGAATACGCGCAGTACCTTGAAGCTGTTGCCGGCGCGA GCGGCGCAATAA
Upstream 100 bases:
>100_bases TTCAAGAAATACTGTGTTATGAAATCCCGGTTGCGATCTTCAACTAGATCAGCAGCATCAATGCCTTCATATAAATAGAA CGACAGGGAGCAGATTTTTC
Downstream 100 bases:
>100_bases GCGCCGCTCAAACCATCGCCGCAAAATTCAGCCGGAACTGCTGCGGCGTCACCCCCAGCCGCCGGTTGAACACACTGCGC ATATGTTGCGCATCGCGAAA
Product: penicillin amidase
Products: NA
Alternate protein names: AHL acylase quiP; Acyl-HSL acylase quiP; Quorum signal utilization and inactivation protein; Acyl-HSL acylase quiP subunit alpha; Acyl-HSL acylase quiP subunit beta [H]
Number of amino acids: Translated: 803; Mature: 803
Protein sequence:
>803_residues MKKGLTVLALLIVIPAIGVGGYLYSKQPTRQGQVELRNLQGSVTVRYDERGVPHIRAENEIDLYRALGYVHAQDRLFQME AMRRLARGELAEVLGPKLLDTDKLFRSLRIRERAASYVAGLDKQSPAWKGLQAYLDGINQYQDSHAAPVEFDVLGIPKRP FTAEDSISVAGYMAYSFAAAFRTEPLLTYVRDQLGADYLNVFDLDWQPKGVLAKGHAGTAPALAAEDWKDLNTLARVSEQ ALIDNGLPQFEGSNAWVIAGSHSKSAKPLLAGDPHIRFSVPSVWYEAQLSAPGFELYGHHQALVPFAFLGHNLDFGWSLT MFQNDDLDLIAEKVNPDNPDQVWYRGQWTDMVKTEQQIAVKGQAPMSITLRQSPHGPIVNDALGTAAGKTPIAMWWAFLE TPNPILEGFYQLNRADTLAKARAAAAKVQAPGLNIVYANAKGDIAWWASALLPKRPAGVKPGFILDGSGNQADKDGYFPF SANPQEENPARGYIVSANFQPVSPTGMEIPGYYNLADRGQQLNRQLADKNVKWDNEANQKLQLGTTTGYGPRLLAPLLPV LREVAGNPAEQKLIEQLAQWQGDYPLDSVSATVFNQFLFNLADAAMRDELGNDFFETLLSTRVIDAALPRLAANADSPWW DNRSTPNKETRVDTVRAAWQASMAHLKSTLGDDASGWQWGKAHTLTHGHPLGQQKPLDRIFNVGPFAAPGSHEVPNNLSA KIGPAPWPVTYGPSTRRLVDFADPAHSLTINPVGQSGVPFDSHYDDQAEAYVDGMYVQAHFSEEEVTANTRSTLKLLPAR AAQ
Sequences:
>Translated_803_residues MKKGLTVLALLIVIPAIGVGGYLYSKQPTRQGQVELRNLQGSVTVRYDERGVPHIRAENEIDLYRALGYVHAQDRLFQME AMRRLARGELAEVLGPKLLDTDKLFRSLRIRERAASYVAGLDKQSPAWKGLQAYLDGINQYQDSHAAPVEFDVLGIPKRP FTAEDSISVAGYMAYSFAAAFRTEPLLTYVRDQLGADYLNVFDLDWQPKGVLAKGHAGTAPALAAEDWKDLNTLARVSEQ ALIDNGLPQFEGSNAWVIAGSHSKSAKPLLAGDPHIRFSVPSVWYEAQLSAPGFELYGHHQALVPFAFLGHNLDFGWSLT MFQNDDLDLIAEKVNPDNPDQVWYRGQWTDMVKTEQQIAVKGQAPMSITLRQSPHGPIVNDALGTAAGKTPIAMWWAFLE TPNPILEGFYQLNRADTLAKARAAAAKVQAPGLNIVYANAKGDIAWWASALLPKRPAGVKPGFILDGSGNQADKDGYFPF SANPQEENPARGYIVSANFQPVSPTGMEIPGYYNLADRGQQLNRQLADKNVKWDNEANQKLQLGTTTGYGPRLLAPLLPV LREVAGNPAEQKLIEQLAQWQGDYPLDSVSATVFNQFLFNLADAAMRDELGNDFFETLLSTRVIDAALPRLAANADSPWW DNRSTPNKETRVDTVRAAWQASMAHLKSTLGDDASGWQWGKAHTLTHGHPLGQQKPLDRIFNVGPFAAPGSHEVPNNLSA KIGPAPWPVTYGPSTRRLVDFADPAHSLTINPVGQSGVPFDSHYDDQAEAYVDGMYVQAHFSEEEVTANTRSTLKLLPAR AAQ >Mature_803_residues MKKGLTVLALLIVIPAIGVGGYLYSKQPTRQGQVELRNLQGSVTVRYDERGVPHIRAENEIDLYRALGYVHAQDRLFQME AMRRLARGELAEVLGPKLLDTDKLFRSLRIRERAASYVAGLDKQSPAWKGLQAYLDGINQYQDSHAAPVEFDVLGIPKRP FTAEDSISVAGYMAYSFAAAFRTEPLLTYVRDQLGADYLNVFDLDWQPKGVLAKGHAGTAPALAAEDWKDLNTLARVSEQ ALIDNGLPQFEGSNAWVIAGSHSKSAKPLLAGDPHIRFSVPSVWYEAQLSAPGFELYGHHQALVPFAFLGHNLDFGWSLT MFQNDDLDLIAEKVNPDNPDQVWYRGQWTDMVKTEQQIAVKGQAPMSITLRQSPHGPIVNDALGTAAGKTPIAMWWAFLE TPNPILEGFYQLNRADTLAKARAAAAKVQAPGLNIVYANAKGDIAWWASALLPKRPAGVKPGFILDGSGNQADKDGYFPF SANPQEENPARGYIVSANFQPVSPTGMEIPGYYNLADRGQQLNRQLADKNVKWDNEANQKLQLGTTTGYGPRLLAPLLPV LREVAGNPAEQKLIEQLAQWQGDYPLDSVSATVFNQFLFNLADAAMRDELGNDFFETLLSTRVIDAALPRLAANADSPWW DNRSTPNKETRVDTVRAAWQASMAHLKSTLGDDASGWQWGKAHTLTHGHPLGQQKPLDRIFNVGPFAAPGSHEVPNNLSA KIGPAPWPVTYGPSTRRLVDFADPAHSLTINPVGQSGVPFDSHYDDQAEAYVDGMYVQAHFSEEEVTANTRSTLKLLPAR AAQ
Specific function: Catalyzes the deacylation of acyl-homoserine lactone (AHL or acyl-HSL), releasing homoserine lactone (HSL) and the corresponding fatty acid. Possesses a specificity for the degradation of long-chain acyl-HSLs (side chains of seven or more carbons in lengt
COG id: COG2366
COG function: function code R; Protein related to penicillin acylase
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S45 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014395 - InterPro: IPR002692 [H]
Pfam domain/function: PF01804 Penicil_amidase [H]
EC number: =3.5.1.97 [H]
Molecular weight: Translated: 88245; Mature: 88245
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: PS00599 AA_TRANSFER_CLASS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKGLTVLALLIVIPAIGVGGYLYSKQPTRQGQVELRNLQGSVTVRYDERGVPHIRAENE CCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCC IDLYRALGYVHAQDRLFQMEAMRRLARGELAEVLGPKLLDTDKLFRSLRIRERAASYVAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHC LDKQSPAWKGLQAYLDGINQYQDSHAAPVEFDVLGIPKRPFTAEDSISVAGYMAYSFAAA CCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHH FRTEPLLTYVRDQLGADYLNVFDLDWQPKGVLAKGHAGTAPALAAEDWKDLNTLARVSEQ HHCCHHHHHHHHHHCCCEEEEEECCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHH ALIDNGLPQFEGSNAWVIAGSHSKSAKPLLAGDPHIRFSVPSVWYEAQLSAPGFELYGHH HHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCCCEECCCC QALVPFAFLGHNLDFGWSLTMFQNDDLDLIAEKVNPDNPDQVWYRGQWTDMVKTEQQIAV HHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHCCCCCCCCEEECCCCHHHHHCCHHEEE KGQAPMSITLRQSPHGPIVNDALGTAAGKTPIAMWWAFLETPNPILEGFYQLNRADTLAK ECCCCEEEEEECCCCCCCCHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH ARAAAAKVQAPGLNIVYANAKGDIAWWASALLPKRPAGVKPGFILDGSGNQADKDGYFPF HHHHHHHCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCC SANPQEENPARGYIVSANFQPVSPTGMEIPGYYNLADRGQQLNRQLADKNVKWDNEANQK CCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCE LQLGTTTGYGPRLLAPLLPVLREVAGNPAEQKLIEQLAQWQGDYPLDSVSATVFNQFLFN EEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH LADAAMRDELGNDFFETLLSTRVIDAALPRLAANADSPWWDNRSTPNKETRVDTVRAAWQ HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHH ASMAHLKSTLGDDASGWQWGKAHTLTHGHPLGQQKPLDRIFNVGPFAAPGSHEVPNNLSA HHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCC KIGPAPWPVTYGPSTRRLVDFADPAHSLTINPVGQSGVPFDSHYDDQAEAYVDGMYVQAH CCCCCCCCCCCCCCCCEEEEECCCCCEEEECCCCCCCCCCCCCCCCHHHHHHCCEEEEEE FSEEEVTANTRSTLKLLPARAAQ CCCHHHCCCCHHHHHHCCCCCCC >Mature Secondary Structure MKKGLTVLALLIVIPAIGVGGYLYSKQPTRQGQVELRNLQGSVTVRYDERGVPHIRAENE CCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCC IDLYRALGYVHAQDRLFQMEAMRRLARGELAEVLGPKLLDTDKLFRSLRIRERAASYVAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHC LDKQSPAWKGLQAYLDGINQYQDSHAAPVEFDVLGIPKRPFTAEDSISVAGYMAYSFAAA CCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHH FRTEPLLTYVRDQLGADYLNVFDLDWQPKGVLAKGHAGTAPALAAEDWKDLNTLARVSEQ HHCCHHHHHHHHHHCCCEEEEEECCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHH ALIDNGLPQFEGSNAWVIAGSHSKSAKPLLAGDPHIRFSVPSVWYEAQLSAPGFELYGHH HHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCCCEECCCC QALVPFAFLGHNLDFGWSLTMFQNDDLDLIAEKVNPDNPDQVWYRGQWTDMVKTEQQIAV HHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHCCCCCCCCEEECCCCHHHHHCCHHEEE KGQAPMSITLRQSPHGPIVNDALGTAAGKTPIAMWWAFLETPNPILEGFYQLNRADTLAK ECCCCEEEEEECCCCCCCCHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH ARAAAAKVQAPGLNIVYANAKGDIAWWASALLPKRPAGVKPGFILDGSGNQADKDGYFPF HHHHHHHCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCC SANPQEENPARGYIVSANFQPVSPTGMEIPGYYNLADRGQQLNRQLADKNVKWDNEANQK CCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCE LQLGTTTGYGPRLLAPLLPVLREVAGNPAEQKLIEQLAQWQGDYPLDSVSATVFNQFLFN EEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH LADAAMRDELGNDFFETLLSTRVIDAALPRLAANADSPWWDNRSTPNKETRVDTVRAAWQ HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHH ASMAHLKSTLGDDASGWQWGKAHTLTHGHPLGQQKPLDRIFNVGPFAAPGSHEVPNNLSA HHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCC KIGPAPWPVTYGPSTRRLVDFADPAHSLTINPVGQSGVPFDSHYDDQAEAYVDGMYVQAH CCCCCCCCCCCCCCCCEEEEECCCCCEEEECCCCCCCCCCCCCCCCHHHHHHCCEEEEEE FSEEEVTANTRSTLKLLPARAAQ CCCHHHCCCCHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]