| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77461615
Identifier: 77461615
GI number: 77461615
Start: 6055831
End: 6056406
Strand: Direct
Name: 77461615
Synonym: Pfl01_5394
Alternate gene names: NA
Gene position: 6055831-6056406 (Clockwise)
Preceding gene: 77461613
Following gene: 77461619
Centisome position: 94.06
GC content: 64.41
Gene sequence:
>576_bases ATGCGTTCGCCCTACCGCACCGCACTGTTTGCCAGCCTGCTCGCCATCGTTTGCGCCGGCGTGCTGTGGGCCGCATACGA CTGGTTTCAGGGCCGCTACCTGAGGGCTTTCAGCGAACACACGGCGGTGTTTTCCGGCGACCCGCTGCGCCTGCCCGCCG ACCTCGCTGGCCCCGGCAACATCCGTCTGGTGCACTTCTGGGACCCGGCCTGCCCATGCAACGTCGGCAACCAGCAGCAC CTGACCGAGATGGTCGAACAGTTCGGCCCCAAGGGCGTGGAATTCTTCGCGGTGCAGAAGGCCGGCAGCCACGGCCAGTT GCCCGCCACCCTCAGCAATCTTAAAACCATCGCGGTGCTGCCCGGCTCCGAGCAGATTCCCGCGAGCCCGGCCGTGGCGA TCTGGGACCGCAGCGGCAGACTGGCGTACTTTGGCCCGTACAGCGAAGGCCTGACGTGCAACTCCAGCAACAGTTTTATC GAACCGATCCTGCAAGCGTTGAGTGATGATCGCCCGGTCAATGCGACTCATACGTTGGCGGTCGGTTGCTACTGCCCGTG GTTGAGTGGGGAGTGA
Upstream 100 bases:
>100_bases CATGGGCAATTCCAGAACGGTAAACGGACTTTATCGGCCTGCGATATTCATCTGTCGCGGCAAGCATGGCAAGCTAGCGC GCTCCCAAGGAATCAAAACC
Downstream 100 bases:
>100_bases GAATTTCGCCATACTCCAAAACTAAACTACTTTGAAACCAGGCTTGCCGTTGGCAGCCCGCCACGCCTTCACCTCTTCAA CCACTGCTGTTGGCCCACTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 191; Mature: 191
Protein sequence:
>191_residues MRSPYRTALFASLLAIVCAGVLWAAYDWFQGRYLRAFSEHTAVFSGDPLRLPADLAGPGNIRLVHFWDPACPCNVGNQQH LTEMVEQFGPKGVEFFAVQKAGSHGQLPATLSNLKTIAVLPGSEQIPASPAVAIWDRSGRLAYFGPYSEGLTCNSSNSFI EPILQALSDDRPVNATHTLAVGCYCPWLSGE
Sequences:
>Translated_191_residues MRSPYRTALFASLLAIVCAGVLWAAYDWFQGRYLRAFSEHTAVFSGDPLRLPADLAGPGNIRLVHFWDPACPCNVGNQQH LTEMVEQFGPKGVEFFAVQKAGSHGQLPATLSNLKTIAVLPGSEQIPASPAVAIWDRSGRLAYFGPYSEGLTCNSSNSFI EPILQALSDDRPVNATHTLAVGCYCPWLSGE >Mature_191_residues MRSPYRTALFASLLAIVCAGVLWAAYDWFQGRYLRAFSEHTAVFSGDPLRLPADLAGPGNIRLVHFWDPACPCNVGNQQH LTEMVEQFGPKGVEFFAVQKAGSHGQLPATLSNLKTIAVLPGSEQIPASPAVAIWDRSGRLAYFGPYSEGLTCNSSNSFI EPILQALSDDRPVNATHTLAVGCYCPWLSGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20713; Mature: 20713
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSPYRTALFASLLAIVCAGVLWAAYDWFQGRYLRAFSEHTAVFSGDPLRLPADLAGPGN CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCEEECCCCCCCCCCCCCCCC IRLVHFWDPACPCNVGNQQHLTEMVEQFGPKGVEFFAVQKAGSHGQLPATLSNLKTIAVL EEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHCCEEEEEC PGSEQIPASPAVAIWDRSGRLAYFGPYSEGLTCNSSNSFIEPILQALSDDRPVNATHTLA CCCCCCCCCCEEEEEECCCCEEEECCCCCCEEECCCCHHHHHHHHHHCCCCCCCCCEEEE VGCYCPWLSGE EEEECCCCCCC >Mature Secondary Structure MRSPYRTALFASLLAIVCAGVLWAAYDWFQGRYLRAFSEHTAVFSGDPLRLPADLAGPGN CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCEEECCCCCCCCCCCCCCCC IRLVHFWDPACPCNVGNQQHLTEMVEQFGPKGVEFFAVQKAGSHGQLPATLSNLKTIAVL EEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHCCEEEEEC PGSEQIPASPAVAIWDRSGRLAYFGPYSEGLTCNSSNSFIEPILQALSDDRPVNATHTLA CCCCCCCCCCEEEEEECCCCEEEECCCCCCEEECCCCHHHHHHHHHHCCCCCCCCCEEEE VGCYCPWLSGE EEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA