| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77461621
Identifier: 77461621
GI number: 77461621
Start: 6063195
End: 6063866
Strand: Direct
Name: 77461621
Synonym: Pfl01_5400
Alternate gene names: NA
Gene position: 6063195-6063866 (Clockwise)
Preceding gene: 77461619
Following gene: 77461629
Centisome position: 94.17
GC content: 62.8
Gene sequence:
>672_bases GTGACGGCGTTTTCGACGAGGAAGCTCAACATGACCACGACCATCGCCGGTATCCGGATCCCCGACAGCGCCCTCGCCCG GGCCACCACCGAGTACATCCGCGACATCGAATCCGACCTGCTTTACCACCACTCGCGCCGGGTATTTCTGTTCGGCGCCT TGAGCGGTGAGCGTCAGCAACTGGCCTACGATCCGGAGCTGCTGTACGTCGGCGCGATGCTCCACGACCTGGGTCTGGTC GAAGGGCATCGCAGCGATGACGAGCGTTTCGAAGTGGATGGCGCCAACGCAGCCGCCGCGTTTCTAAAACCGTACGGGTT GAGTGACGACGACATCGAGCAGGTGTGGCTGTCGATCGCCCTGCACACCACGCCGGGGGTGCCGAAGCATCTGCGTCCGA CCGTGGCGCTGGTGACCGCAGGCGTCGAGATGGACGTGCTGGGCATGGACTACGCGGCATTCACCACGGTGCAGCGTGAG GCGGTGGTGCATGCGCATCCACGGGGCGAGGGCTTCAAGGAATGCATCATCTGCGCGTTCGCCGACGGCTTGCGTCATCG TCCGCAGACCACGTTCGGCAATGTGAAGACCGATGTGCTGAAGGATCAGGTACCGGGTTTCAAGCCGATGAATTTCGTCG AGGTGATTCGCCAGTCGCCCTGGGTTTCCTGA
Upstream 100 bases:
>100_bases GAAGCGAGCTGGCACGATTTGCAGGTGCAATGGCAAGGATCGCAGCCATGGATCGATTGTCCGGTTTTGCCCCCGGGAAC AGACTTTCTCCATCAGCGCC
Downstream 100 bases:
>100_bases CCGGCATAAAAAAACCTCGCGACCGTGACCGGTCGCGAGGTTTTTTGTATCCGCAGACTTAAGCCGCTTCCGGCGTCGGC GCCCGGCGCACGTCCGGTTG
Product: metal dependent phosphohydrolase
Products: NA
Alternate protein names: Metal-Dependent Phosphohydrolase; Cyanamide Hydratase; HD Domain-Containing Protein; Sensory Box HD Domain-Containing Protein; HD Domain-Containing
Number of amino acids: Translated: 223; Mature: 222
Protein sequence:
>223_residues MTAFSTRKLNMTTTIAGIRIPDSALARATTEYIRDIESDLLYHHSRRVFLFGALSGERQQLAYDPELLYVGAMLHDLGLV EGHRSDDERFEVDGANAAAAFLKPYGLSDDDIEQVWLSIALHTTPGVPKHLRPTVALVTAGVEMDVLGMDYAAFTTVQRE AVVHAHPRGEGFKECIICAFADGLRHRPQTTFGNVKTDVLKDQVPGFKPMNFVEVIRQSPWVS
Sequences:
>Translated_223_residues MTAFSTRKLNMTTTIAGIRIPDSALARATTEYIRDIESDLLYHHSRRVFLFGALSGERQQLAYDPELLYVGAMLHDLGLV EGHRSDDERFEVDGANAAAAFLKPYGLSDDDIEQVWLSIALHTTPGVPKHLRPTVALVTAGVEMDVLGMDYAAFTTVQRE AVVHAHPRGEGFKECIICAFADGLRHRPQTTFGNVKTDVLKDQVPGFKPMNFVEVIRQSPWVS >Mature_222_residues TAFSTRKLNMTTTIAGIRIPDSALARATTEYIRDIESDLLYHHSRRVFLFGALSGERQQLAYDPELLYVGAMLHDLGLVE GHRSDDERFEVDGANAAAAFLKPYGLSDDDIEQVWLSIALHTTPGVPKHLRPTVALVTAGVEMDVLGMDYAAFTTVQREA VVHAHPRGEGFKECIICAFADGLRHRPQTTFGNVKTDVLKDQVPGFKPMNFVEVIRQSPWVS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24754; Mature: 24623
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAFSTRKLNMTTTIAGIRIPDSALARATTEYIRDIESDLLYHHSRRVFLFGALSGERQQ CCCCCCCEEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHH LAYDPELLYVGAMLHDLGLVEGHRSDDERFEVDGANAAAAFLKPYGLSDDDIEQVWLSIA HCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHCCCCCCCHHHHHHHHHHE LHTTPGVPKHLRPTVALVTAGVEMDVLGMDYAAFTTVQREAVVHAHPRGEGFKECIICAF EECCCCCCCCCCCEEEEEECCCEEEEECCCHHHHHHHHHHHEEEECCCCCCHHHHHHHHH ADGLRHRPQTTFGNVKTDVLKDQVPGFKPMNFVEVIRQSPWVS HHHHCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCC >Mature Secondary Structure TAFSTRKLNMTTTIAGIRIPDSALARATTEYIRDIESDLLYHHSRRVFLFGALSGERQQ CCCCCCEEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHH LAYDPELLYVGAMLHDLGLVEGHRSDDERFEVDGANAAAAFLKPYGLSDDDIEQVWLSIA HCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHCCCCCCCHHHHHHHHHHE LHTTPGVPKHLRPTVALVTAGVEMDVLGMDYAAFTTVQREAVVHAHPRGEGFKECIICAF EECCCCCCCCCCCEEEEEECCCEEEEECCCHHHHHHHHHHHEEEECCCCCCHHHHHHHHH ADGLRHRPQTTFGNVKTDVLKDQVPGFKPMNFVEVIRQSPWVS HHHHCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA