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The map label for this gene is ydhO [H]

Identifier: 77461538

GI number: 77461538

Start: 5981505

End: 5982122

Strand: Direct

Name: ydhO [H]

Synonym: Pfl01_5317

Alternate gene names: 77461538

Gene position: 5981505-5982122 (Clockwise)

Preceding gene: 77461536

Following gene: 77461540

Centisome position: 92.9

GC content: 57.12

Gene sequence:

>618_bases
ATGCGTCCATTTTTCAAGACATGGCTAACCATTTGCCTATTAATGCCACTGGCCGCCCACGCCACCAATCGTGAGCAACG
TCTTCCCAACGTTAACGGTTTCACCCCTAAATCCCATGCCTCTGCTCCTTCGAACAAAGGCAAACAGGTCAAACACACCA
CGCTGAGCAGCAACGGCCGCAGCAAGCTGGTGCCACCGATGGCGACCAAGGAAAGCAGTAACGTCCTGAGTCGCGCGGTA
AACGTCCTCGGTACGCCATACCGCTGGGGCGGCAGCAGCCCGAGTAAAGGCTTCGACTGCAGCGGTCTGGTGAAGTATGC
GTTCAACGACGCCACGTTCGACCTGCCACGCACCTCGAACGCCATGGCCAGCGGTCACGGCGAGAAAGTCGAACGCAAGG
ACCTGAAACCGGGCGACCTGATTTTTTTCAACATCAAGAGCCGTCGGGTCAATCACGTTGCCATCTACCTGGGCAACGAC
CGTTTCATCCATGCGCCACGGCGCGGCAAAGCGGTGAGCATCGACACACTGAACAAGCCGTACTGGGAAAAGCATTACGT
GGTAGCCAAACGCGTATTGCCGAAAGAACAGGGGCAGATGCGCGTCGTTCAGCGCTGA

Upstream 100 bases:

>100_bases
ATTTGGTTCCGTTGGCACCCGATTGAATCGACCAACGGCCTCGGAAGTGACAAAAAAGCTGTTATAAAGTTGCGCGCTAA
CACACCAAGAGCCCTGCCTA

Downstream 100 bases:

>100_bases
TTGTTCAGGTAAAAAAACGCAGCCCACGGGCTGCGTTTTTTTTGCCTAAAAGTTATCCGGCGTGCGCGCCTTCTCCCGCG
CATGTTCGCGGCTGATCAAG

Product: NLP/P60

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MRPFFKTWLTICLLMPLAAHATNREQRLPNVNGFTPKSHASAPSNKGKQVKHTTLSSNGRSKLVPPMATKESSNVLSRAV
NVLGTPYRWGGSSPSKGFDCSGLVKYAFNDATFDLPRTSNAMASGHGEKVERKDLKPGDLIFFNIKSRRVNHVAIYLGND
RFIHAPRRGKAVSIDTLNKPYWEKHYVVAKRVLPKEQGQMRVVQR

Sequences:

>Translated_205_residues
MRPFFKTWLTICLLMPLAAHATNREQRLPNVNGFTPKSHASAPSNKGKQVKHTTLSSNGRSKLVPPMATKESSNVLSRAV
NVLGTPYRWGGSSPSKGFDCSGLVKYAFNDATFDLPRTSNAMASGHGEKVERKDLKPGDLIFFNIKSRRVNHVAIYLGND
RFIHAPRRGKAVSIDTLNKPYWEKHYVVAKRVLPKEQGQMRVVQR
>Mature_205_residues
MRPFFKTWLTICLLMPLAAHATNREQRLPNVNGFTPKSHASAPSNKGKQVKHTTLSSNGRSKLVPPMATKESSNVLSRAV
NVLGTPYRWGGSSPSKGFDCSGLVKYAFNDATFDLPRTSNAMASGHGEKVERKDLKPGDLIFFNIKSRRVNHVAIYLGND
RFIHAPRRGKAVSIDTLNKPYWEKHYVVAKRVLPKEQGQMRVVQR

Specific function: Unknown

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpC/p60 family [H]

Homologues:

Organism=Escherichia coli, GI1787944, Length=177, Percent_Identity=39.5480225988701, Blast_Score=127, Evalue=6e-31,
Organism=Escherichia coli, GI1786421, Length=125, Percent_Identity=44.8, Blast_Score=118, Evalue=3e-28,
Organism=Escherichia coli, GI1788501, Length=124, Percent_Identity=38.7096774193548, Blast_Score=87, Evalue=5e-19,
Organism=Escherichia coli, GI1788001, Length=112, Percent_Identity=41.9642857142857, Blast_Score=77, Evalue=7e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000064 [H]

Pfam domain/function: PF00877 NLPC_P60 [H]

EC number: NA

Molecular weight: Translated: 22943; Mature: 22943

Theoretical pI: Translated: 11.18; Mature: 11.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPFFKTWLTICLLMPLAAHATNREQRLPNVNGFTPKSHASAPSNKGKQVKHTTLSSNGR
CCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCC
SKLVPPMATKESSNVLSRAVNVLGTPYRWGGSSPSKGFDCSGLVKYAFNDATFDLPRTSN
CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHEEEECCCEEECCCCCC
AMASGHGEKVERKDLKPGDLIFFNIKSRRVNHVAIYLGNDRFIHAPRRGKAVSIDTLNKP
CHHCCCCCCCHHCCCCCCCEEEEEECCCCEEEEEEEECCCEEEECCCCCCEEEEECCCCC
YWEKHYVVAKRVLPKEQGQMRVVQR
CHHHHHHHHHHHCCCCCCCEEECCC
>Mature Secondary Structure
MRPFFKTWLTICLLMPLAAHATNREQRLPNVNGFTPKSHASAPSNKGKQVKHTTLSSNGR
CCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCC
SKLVPPMATKESSNVLSRAVNVLGTPYRWGGSSPSKGFDCSGLVKYAFNDATFDLPRTSN
CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHEEEECCCEEECCCCCC
AMASGHGEKVERKDLKPGDLIFFNIKSRRVNHVAIYLGNDRFIHAPRRGKAVSIDTLNKP
CHHCCCCCCCHHCCCCCCCEEEEEECCCCEEEEEEEECCCEEEECCCCCCEEEEECCCCC
YWEKHYVVAKRVLPKEQGQMRVVQR
CHHHHHHHHHHHCCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]