| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is metK [H]
Identifier: 77461490
GI number: 77461490
Start: 5929733
End: 5930923
Strand: Direct
Name: metK [H]
Synonym: Pfl01_5269
Alternate gene names: 77461490
Gene position: 5929733-5930923 (Clockwise)
Preceding gene: 77461489
Following gene: 77461491
Centisome position: 92.1
GC content: 61.96
Gene sequence:
>1191_bases ATGAGCGAATACTCCCTCTTCACCTCCGAGTCCGTGTCTGAAGGACATCCGGACAAAATCGCCGACCAGATTTCCGATGC AGTGCTGGACGCCATCATCGCCCAGGACAAGCACGCACGCGTTGCGGTGGAAACCCTGGTCAAGACGGGCGTGGCCATCG TTGCCGGTGAAGTGACCACCAGCGCCTGGGTCGACCTGGAGCAGATCGTTCGTGACGTGATCTGCGACATCGGCTACACC AGCTCCGACGTCGGCTTCGACGGCGCGACCTGCGGCGTGATGAACATCATCGGCAAGCAGTCCCCTGACATCAACCAGGG TGTTGACCGTGCCAAGCCTGAAGATCAGGGCGCCGGCGACCAGGGCCTGATGTTCGGCTACGCCAGCAACGAAACCGACG TGCTGATGCCGGCACCGATCACCTTCTCGCACCAGCTGGTACAGCGTCAGGCCGAAGCCCGTAAATCGGGTCTGCTGCCT TGGCTGCGTCCGGACGCCAAGTCGCAAGTCACCTGCCGTTACGAAGGCGGCAAGGTTGTCGGTATCGACGCCGTGGTTCT GTCGACCCAGCACAACCCGGAAGTGTCGTACAACGACCTGCGCGAAGGCGTGATGGAGCTGATCGTCAAGCACGTGCTGC CTGCCGAACTGCTGAGCAAGGACACCCAGTTCCACATCAACCCGACCGGCCAGTTCATCATTGGCGGCCCGGTAGGTGAC TGCGGTCTGACCGGTCGCAAGATCATCGTCGACAGCTACGGCGGCATGGCCCGTCACGGCGGCGGCGCGTTCTCCGGTAA GGATCCATCCAAGGTTGACCGTTCGGCGGCCTACGCTGGCCGTTACGTTGCCAAGAACATCGTGGCGGCCGGCCTGGCCG AGCGTTGCGAGATTCAGGTTTCCTACGCGATCGGTGTGGCCCAGCCTACCTCGATCTCGCTGAACACCTTCGGCACCGGC AAGATCAGCGACGACAAGATCATCAAACTGGTCCGCGAAGTGTTCGACCTGCGTCCATACGCGATCACCACCATGCTGGA TCTGCTGCACCCGATGTACCAGGAAACCGCAGCCTACGGCCACTTCGGCCGTGCTCCGCAGACCAAGACCGTTGGCGAAG ACACCTTCTCCACGTTCACCTGGGAAAAAACCGACCGCGCCGACGCTCTGCGTTCCGCTGCCGGCCTGTAA
Upstream 100 bases:
>100_bases CCTCTATGTAGGCTTACGTAATGGTTTCCAGATCCAGGTCCGCCATTTTCAGCGACCGGCTGGCGACACTCACCATCGGT AAATTCAGGAAAACATCGAG
Downstream 100 bases:
>100_bases TTTTCCTGGCGGTACAAGAAGCCCCGCACGGTTCGCCGTGCGGGGCTTTTTCATGGCCGCGAAACAACCGGCAAAACAGC CGCCCGGCCCGCTTCAAAAT
Product: S-adenosylmethionine synthetase
Products: NA
Alternate protein names: AdoMet synthase; MAT; Methionine adenosyltransferase [H]
Number of amino acids: Translated: 396; Mature: 395
Protein sequence:
>396_residues MSEYSLFTSESVSEGHPDKIADQISDAVLDAIIAQDKHARVAVETLVKTGVAIVAGEVTTSAWVDLEQIVRDVICDIGYT SSDVGFDGATCGVMNIIGKQSPDINQGVDRAKPEDQGAGDQGLMFGYASNETDVLMPAPITFSHQLVQRQAEARKSGLLP WLRPDAKSQVTCRYEGGKVVGIDAVVLSTQHNPEVSYNDLREGVMELIVKHVLPAELLSKDTQFHINPTGQFIIGGPVGD CGLTGRKIIVDSYGGMARHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLAERCEIQVSYAIGVAQPTSISLNTFGTG KISDDKIIKLVREVFDLRPYAITTMLDLLHPMYQETAAYGHFGRAPQTKTVGEDTFSTFTWEKTDRADALRSAAGL
Sequences:
>Translated_396_residues MSEYSLFTSESVSEGHPDKIADQISDAVLDAIIAQDKHARVAVETLVKTGVAIVAGEVTTSAWVDLEQIVRDVICDIGYT SSDVGFDGATCGVMNIIGKQSPDINQGVDRAKPEDQGAGDQGLMFGYASNETDVLMPAPITFSHQLVQRQAEARKSGLLP WLRPDAKSQVTCRYEGGKVVGIDAVVLSTQHNPEVSYNDLREGVMELIVKHVLPAELLSKDTQFHINPTGQFIIGGPVGD CGLTGRKIIVDSYGGMARHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLAERCEIQVSYAIGVAQPTSISLNTFGTG KISDDKIIKLVREVFDLRPYAITTMLDLLHPMYQETAAYGHFGRAPQTKTVGEDTFSTFTWEKTDRADALRSAAGL >Mature_395_residues SEYSLFTSESVSEGHPDKIADQISDAVLDAIIAQDKHARVAVETLVKTGVAIVAGEVTTSAWVDLEQIVRDVICDIGYTS SDVGFDGATCGVMNIIGKQSPDINQGVDRAKPEDQGAGDQGLMFGYASNETDVLMPAPITFSHQLVQRQAEARKSGLLPW LRPDAKSQVTCRYEGGKVVGIDAVVLSTQHNPEVSYNDLREGVMELIVKHVLPAELLSKDTQFHINPTGQFIIGGPVGDC GLTGRKIIVDSYGGMARHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLAERCEIQVSYAIGVAQPTSISLNTFGTGK ISDDKIIKLVREVFDLRPYAITTMLDLLHPMYQETAAYGHFGRAPQTKTVGEDTFSTFTWEKTDRADALRSAAGL
Specific function: Catalyzes the formation of S-adenosylmethionine from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the e
COG id: COG0192
COG function: function code H; S-adenosylmethionine synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AdoMet synthase family [H]
Homologues:
Organism=Homo sapiens, GI4557737, Length=383, Percent_Identity=54.5691906005222, Blast_Score=395, Evalue=1e-110, Organism=Homo sapiens, GI5174529, Length=383, Percent_Identity=54.0469973890339, Blast_Score=391, Evalue=1e-109, Organism=Escherichia coli, GI1789311, Length=391, Percent_Identity=72.3785166240409, Blast_Score=591, Evalue=1e-170, Organism=Caenorhabditis elegans, GI17538498, Length=383, Percent_Identity=54.5691906005222, Blast_Score=398, Evalue=1e-111, Organism=Caenorhabditis elegans, GI17538494, Length=389, Percent_Identity=53.9845758354756, Blast_Score=397, Evalue=1e-111, Organism=Caenorhabditis elegans, GI25145633, Length=386, Percent_Identity=53.3678756476684, Blast_Score=392, Evalue=1e-109, Organism=Caenorhabditis elegans, GI17551082, Length=388, Percent_Identity=52.5773195876289, Blast_Score=390, Evalue=1e-109, Organism=Caenorhabditis elegans, GI32565905, Length=389, Percent_Identity=48.586118251928, Blast_Score=337, Evalue=5e-93, Organism=Caenorhabditis elegans, GI32565911, Length=336, Percent_Identity=51.4880952380952, Blast_Score=327, Evalue=5e-90, Organism=Caenorhabditis elegans, GI25145635, Length=339, Percent_Identity=50.1474926253687, Blast_Score=321, Evalue=4e-88, Organism=Caenorhabditis elegans, GI32565903, Length=314, Percent_Identity=50.6369426751592, Blast_Score=298, Evalue=4e-81, Organism=Caenorhabditis elegans, GI32565909, Length=99, Percent_Identity=56.5656565656566, Blast_Score=105, Evalue=5e-23, Organism=Caenorhabditis elegans, GI32565907, Length=50, Percent_Identity=68, Blast_Score=67, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6320710, Length=390, Percent_Identity=53.5897435897436, Blast_Score=392, Evalue=1e-110, Organism=Saccharomyces cerevisiae, GI6323209, Length=383, Percent_Identity=53.2637075718016, Blast_Score=382, Evalue=1e-107, Organism=Drosophila melanogaster, GI45552159, Length=383, Percent_Identity=51.4360313315927, Blast_Score=366, Evalue=1e-101, Organism=Drosophila melanogaster, GI24580529, Length=383, Percent_Identity=51.4360313315927, Blast_Score=366, Evalue=1e-101, Organism=Drosophila melanogaster, GI24580537, Length=383, Percent_Identity=51.4360313315927, Blast_Score=366, Evalue=1e-101, Organism=Drosophila melanogaster, GI24580533, Length=383, Percent_Identity=51.4360313315927, Blast_Score=366, Evalue=1e-101, Organism=Drosophila melanogaster, GI24580535, Length=383, Percent_Identity=51.4360313315927, Blast_Score=366, Evalue=1e-101, Organism=Drosophila melanogaster, GI24580531, Length=383, Percent_Identity=51.4360313315927, Blast_Score=366, Evalue=1e-101, Organism=Drosophila melanogaster, GI24580527, Length=383, Percent_Identity=51.4360313315927, Blast_Score=362, Evalue=1e-100, Organism=Drosophila melanogaster, GI24580525, Length=383, Percent_Identity=51.4360313315927, Blast_Score=362, Evalue=1e-100, Organism=Drosophila melanogaster, GI24580541, Length=385, Percent_Identity=49.0909090909091, Blast_Score=341, Evalue=5e-94, Organism=Drosophila melanogaster, GI24580539, Length=117, Percent_Identity=52.991452991453, Blast_Score=120, Evalue=1e-27,
Paralogues:
None
Copy number: 7,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022631 - InterPro: IPR022630 - InterPro: IPR022629 - InterPro: IPR022628 - InterPro: IPR002133 - InterPro: IPR022636 [H]
Pfam domain/function: PF02773 S-AdoMet_synt_C; PF02772 S-AdoMet_synt_M; PF00438 S-AdoMet_synt_N [H]
EC number: =2.5.1.6 [H]
Molecular weight: Translated: 42528; Mature: 42397
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: PS00376 ADOMET_SYNTHETASE_1 ; PS00377 ADOMET_SYNTHETASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEYSLFTSESVSEGHPDKIADQISDAVLDAIIAQDKHARVAVETLVKTGVAIVAGEVTT CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEECCCHH SAWVDLEQIVRDVICDIGYTSSDVGFDGATCGVMNIIGKQSPDINQGVDRAKPEDQGAGD HHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCC QGLMFGYASNETDVLMPAPITFSHQLVQRQAEARKSGLLPWLRPDAKSQVTCRYEGGKVV CCEEEEECCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCEEE GIDAVVLSTQHNPEVSYNDLREGVMELIVKHVLPAELLSKDTQFHINPTGQFIIGGPVGD EEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCHHHHCCCCEEEECCCCCEEECCCCCC CGLTGRKIIVDSYGGMARHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLAERCEIQV CCCCCCEEEEECCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEE SYAIGVAQPTSISLNTFGTGKISDDKIIKLVREVFDLRPYAITTMLDLLHPMYQETAAYG EEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC HFGRAPQTKTVGEDTFSTFTWEKTDRADALRSAAGL CCCCCCCCCCCCCCHHCEEEECCCHHHHHHHHHCCC >Mature Secondary Structure SEYSLFTSESVSEGHPDKIADQISDAVLDAIIAQDKHARVAVETLVKTGVAIVAGEVTT CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEECCCHH SAWVDLEQIVRDVICDIGYTSSDVGFDGATCGVMNIIGKQSPDINQGVDRAKPEDQGAGD HHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCC QGLMFGYASNETDVLMPAPITFSHQLVQRQAEARKSGLLPWLRPDAKSQVTCRYEGGKVV CCEEEEECCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCEEE GIDAVVLSTQHNPEVSYNDLREGVMELIVKHVLPAELLSKDTQFHINPTGQFIIGGPVGD EEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCHHHHCCCCEEEECCCCCEEECCCCCC CGLTGRKIIVDSYGGMARHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLAERCEIQV CCCCCCEEEEECCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEE SYAIGVAQPTSISLNTFGTGKISDDKIIKLVREVFDLRPYAITTMLDLLHPMYQETAAYG EEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC HFGRAPQTKTVGEDTFSTFTWEKTDRADALRSAAGL CCCCCCCCCCCCCCHHCEEEECCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA