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The map label for this gene is yafE [C]

Identifier: 77461489

GI number: 77461489

Start: 5928719

End: 5929714

Strand: Direct

Name: yafE [C]

Synonym: Pfl01_5268

Alternate gene names: 77461489

Gene position: 5928719-5929714 (Clockwise)

Preceding gene: 77461482

Following gene: 77461490

Centisome position: 92.08

GC content: 61.14

Gene sequence:

>996_bases
ATGAACTTACGCGTGCCTTCCATTCGCCATGACGACTGCGACGAGCTGGCGGCCCTGTGCAAGGCCGGCGGCGATCCGCT
GCGGCTGAATGTATTGCGCGCCCTGGCCAACGACTCGTTCGGCGTACTGGAACTGGCGCAGATTTTCGATATCGGCCAGT
CCGGCATGAGCCATCACCTGAAGGTGCTGGCGCAGGCGGATCTGGTGGCGACTCGCCGCGAAGGCAATGCGGTGTTCTAT
CGCCGCGCCCTGCCCCACACCGAGTTGCTGGGCGGCAAGTTGCATGCGGCATTGTTAGAAGAAGTCGACAATCTGGCGCT
GCCAGCCGACGTGGAAACCCGGATCGCACAGGTTCACGGGCAACGCGCGGCCAACAGCCAGGACTTTTTCGCAAGGGTTG
CAGAGAAATTCCGCGCCCAGCAGGATTTGATTGCCGGCCTGCCGCAGTACCGTGAAAGCGTGCTGGCCCTGCTCGACAAA
CTGAATTTCAATGGCGCTGCCACGGCCATTGAAGTCGGCCCCGGCGATGGAGCTTTTCTGCCGGAACTGGCGCGTCGCTT
CGGCACCGTAACCGCACTGGACAACAGCGCGGCGATGCTCGAACTGGCCCGCCAAGTATGTGAACGTGAACAGCTGACTA
ACGTCAGCCTGCAATTGGCCGATGCATTGAATGGCGTGAGCCTTCAGGCCGATTGCGTGGTGTTGAACATGGTGTTGCAC
CATTTCGCCGCGCCGGCCGAAGCGCTCAAGCACATGGCCAGCCTGCTGCAACCGGGCGGTAGCCTGCTCGTGACAGAGTT
ATGTAGCCACAACCAGAGTTGGGCCAGGGAGGCCTGCGGTGATCTGTGGTTGGGGTTTGAACAGGACGATCTGGCCCGTT
GGGCCACCGCTGCGGGACTCGTTCCCGGGGAAAGCCTCTATGTAGGCTTACGTAATGGTTTCCAGATCCAGGTCCGCCAT
TTTCAGCGACCGGCTGGCGACACTCACCATCGGTAA

Upstream 100 bases:

>100_bases
GGCGAGAAGTGCAATCGAATGCGCCATCCATCGAGCAATATCAAAACTTTTTGATATAGACCTTGCGATGCCTTCCGGCC
GTCACTAGACTGCCAGCCCT

Downstream 100 bases:

>100_bases
ATTCAGGAAAACATCGAGATGAGCGAATACTCCCTCTTCACCTCCGAGTCCGTGTCTGAAGGACATCCGGACAAAATCGC
CGACCAGATTTCCGATGCAG

Product: ArsR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator ArsR Family; Methyltransferase Type; SAM-Dependent Methyltransferase; Transcriptional Regulator; Methyltransferase Domain Family; ArsR Family Regulatory Protein; Transcriptional Regulator Arsr Family; ArsR-Family Transcriptional Regulator; ArsR Domain Proteni; Transcriptional Regulator ArsR Family/Methyltransferase; Regulatory Protein; UbiE/COQ5 Family Methlytransferase; ArsR Family Methyltransferase Transcriptional Regulator; Ribosomal Methyltransferase; RNA Polymerase Sigma-24 Subunit ECF Subfamily; Methyltransferase Transcriptional Regulator Protein; Methyltransferase Domain Family Protein

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MNLRVPSIRHDDCDELAALCKAGGDPLRLNVLRALANDSFGVLELAQIFDIGQSGMSHHLKVLAQADLVATRREGNAVFY
RRALPHTELLGGKLHAALLEEVDNLALPADVETRIAQVHGQRAANSQDFFARVAEKFRAQQDLIAGLPQYRESVLALLDK
LNFNGAATAIEVGPGDGAFLPELARRFGTVTALDNSAAMLELARQVCEREQLTNVSLQLADALNGVSLQADCVVLNMVLH
HFAAPAEALKHMASLLQPGGSLLVTELCSHNQSWAREACGDLWLGFEQDDLARWATAAGLVPGESLYVGLRNGFQIQVRH
FQRPAGDTHHR

Sequences:

>Translated_331_residues
MNLRVPSIRHDDCDELAALCKAGGDPLRLNVLRALANDSFGVLELAQIFDIGQSGMSHHLKVLAQADLVATRREGNAVFY
RRALPHTELLGGKLHAALLEEVDNLALPADVETRIAQVHGQRAANSQDFFARVAEKFRAQQDLIAGLPQYRESVLALLDK
LNFNGAATAIEVGPGDGAFLPELARRFGTVTALDNSAAMLELARQVCEREQLTNVSLQLADALNGVSLQADCVVLNMVLH
HFAAPAEALKHMASLLQPGGSLLVTELCSHNQSWAREACGDLWLGFEQDDLARWATAAGLVPGESLYVGLRNGFQIQVRH
FQRPAGDTHHR
>Mature_331_residues
MNLRVPSIRHDDCDELAALCKAGGDPLRLNVLRALANDSFGVLELAQIFDIGQSGMSHHLKVLAQADLVATRREGNAVFY
RRALPHTELLGGKLHAALLEEVDNLALPADVETRIAQVHGQRAANSQDFFARVAEKFRAQQDLIAGLPQYRESVLALLDK
LNFNGAATAIEVGPGDGAFLPELARRFGTVTALDNSAAMLELARQVCEREQLTNVSLQLADALNGVSLQADCVVLNMVLH
HFAAPAEALKHMASLLQPGGSLLVTELCSHNQSWAREACGDLWLGFEQDDLARWATAAGLVPGESLYVGLRNGFQIQVRH
FQRPAGDTHHR

Specific function: Unknown

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35981; Mature: 35981

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLRVPSIRHDDCDELAALCKAGGDPLRLNVLRALANDSFGVLELAQIFDIGQSGMSHHL
CCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
KVLAQADLVATRREGNAVFYRRALPHTELLGGKLHAALLEEVDNLALPADVETRIAQVHG
HHHHHHHHHHHCCCCCEEEEECCCCHHHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
QRAANSQDFFARVAEKFRAQQDLIAGLPQYRESVLALLDKLNFNGAATAIEVGPGDGAFL
HHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHH
PELARRFGTVTALDNSAAMLELARQVCEREQLTNVSLQLADALNGVSLQADCVVLNMVLH
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
HFAAPAEALKHMASLLQPGGSLLVTELCSHNQSWAREACGDLWLGFEQDDLARWATAAGL
HHCCHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCC
VPGESLYVGLRNGFQIQVRHFQRPAGDTHHR
CCCCCEEEECCCCCEEEEEHHCCCCCCCCCC
>Mature Secondary Structure
MNLRVPSIRHDDCDELAALCKAGGDPLRLNVLRALANDSFGVLELAQIFDIGQSGMSHHL
CCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
KVLAQADLVATRREGNAVFYRRALPHTELLGGKLHAALLEEVDNLALPADVETRIAQVHG
HHHHHHHHHHHCCCCCEEEEECCCCHHHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
QRAANSQDFFARVAEKFRAQQDLIAGLPQYRESVLALLDKLNFNGAATAIEVGPGDGAFL
HHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHH
PELARRFGTVTALDNSAAMLELARQVCEREQLTNVSLQLADALNGVSLQADCVVLNMVLH
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
HFAAPAEALKHMASLLQPGGSLLVTELCSHNQSWAREACGDLWLGFEQDDLARWATAAGL
HHCCHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCC
VPGESLYVGLRNGFQIQVRHFQRPAGDTHHR
CCCCCEEEECCCCCEEEEEHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA