| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77461438
Identifier: 77461438
GI number: 77461438
Start: 5866396
End: 5867640
Strand: Reverse
Name: 77461438
Synonym: Pfl01_5217
Alternate gene names: NA
Gene position: 5867640-5866396 (Counterclockwise)
Preceding gene: 77461439
Following gene: 77461436
Centisome position: 91.13
GC content: 60.64
Gene sequence:
>1245_bases ATGTCAGCGGTCGGTCATCTGAAACACGAATACGACAAGGTCAAGCTGCGCCTGCACGGCTTGTTCACGCGCATCGAAAT GGCCTGGATGAAGCTCATCAGCGAACTCGAACCCAAGGAATTCGAGGCCATCATCAAGTTGCTCCAACGCGGTCACGATC AGGCGCAATACGTGCTCAAGCACGGCGAGTTGCCGACCGACGAGCCGGCCGTGCCGTGGGAGTTGGCCCACGGTTTGTCG ATCCTGCGCATCGGCAACGCGACGCCGTTGCCGCAATCGCCCGATCAATTGCAGACCAAGGTGCTCAAGGACGGCACGTT GCTTGGCTGCCGCAAATGGGAACTGCTGGATCTGCTGTGGAGCGAGGCTCTGCTCAAGTGGATCGAGAACCTGCGCCATC ACGCGACTTTCGGCACCGATCCGGCGCTGGTGACCATGGAGCGCGAAGTGACGCTGGCGATTGCCGGCGACTGGGGCACC GGACCGTTCAACAGCCATGCGCCGGCGGTGTCGGTGGCCAACCAGATGCAACTGGCCAATGCCGATTTCACCATTCACCT GGGGGACGTCTATTACGCCGGCACTCACTCCCAGGAAGACACCGACATGGCCGGCTGGCCGATGGGCACCCACGGCTCGT TCACCCTCAATTCCAACCACGAGATGTACAGCGGCGCCCACGGTTACTTCAAGGAACTGGCGGCGCGCTTTCCGGGGCAG CAGGGCACCAGTTACTTTGCCCTGATCAATGACGACTGGCTGATTGTCGGGCTGGATACGGCGTACGCCTCGGACGTCAT GAACCTGTACATGGACGGCACCCTGAACAAGCCGCAGATCGAATGGATGAAGGGCCTGCCGAAGCGCAAAAAACTCATGG TGCTCAGCCACCATCAGGGCTTCGACATCACCGGGCACCACAAGACTGCGCTGTATCAACCGGTGTGCGATGCGCTGGGG CGTGAGCCGGATTATTGGTATTGGGGCCATTTGCACAACGGCATTGTCTATGCGGCCCAGGGCGGACTGCATGCGCGTTG TGCCGGGCACGGAGCGATTCCCTACGGCACCACCAGCGAGCTGAACGGGCATTCGCGGGTGCTGTTTTCGGAGACGAAGG ATGCGAACGATCCGGACTACCCGCTGCGGGTGTTGAACGGGTACGCGAAGATCAGGTTGGTGGGGGAGGAGATTTTCGAG GAGTTTATCGGGGAGGATGGATCGGTGAGGTGGTCATCGACGTGA
Upstream 100 bases:
>100_bases AGCGGTCACCTGTACGGCACGACGCTGTCGGACGACGACAAGCGTGCGCTGATCGAATTCATGAAAACCCTGTGAACCCT TACGGATAGAGGATTTCGCC
Downstream 100 bases:
>100_bases TCCGTTCTGATCGTTCCCGCGCAGGGCGCGGGAACGATCAATGACGCGAATCAACCCTGAACCGGAACCCCCTTGAGATA CGGCGCAGGCTCGGCCCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: Metallophosphoesterase Domain
Number of amino acids: Translated: 414; Mature: 413
Protein sequence:
>414_residues MSAVGHLKHEYDKVKLRLHGLFTRIEMAWMKLISELEPKEFEAIIKLLQRGHDQAQYVLKHGELPTDEPAVPWELAHGLS ILRIGNATPLPQSPDQLQTKVLKDGTLLGCRKWELLDLLWSEALLKWIENLRHHATFGTDPALVTMEREVTLAIAGDWGT GPFNSHAPAVSVANQMQLANADFTIHLGDVYYAGTHSQEDTDMAGWPMGTHGSFTLNSNHEMYSGAHGYFKELAARFPGQ QGTSYFALINDDWLIVGLDTAYASDVMNLYMDGTLNKPQIEWMKGLPKRKKLMVLSHHQGFDITGHHKTALYQPVCDALG REPDYWYWGHLHNGIVYAAQGGLHARCAGHGAIPYGTTSELNGHSRVLFSETKDANDPDYPLRVLNGYAKIRLVGEEIFE EFIGEDGSVRWSST
Sequences:
>Translated_414_residues MSAVGHLKHEYDKVKLRLHGLFTRIEMAWMKLISELEPKEFEAIIKLLQRGHDQAQYVLKHGELPTDEPAVPWELAHGLS ILRIGNATPLPQSPDQLQTKVLKDGTLLGCRKWELLDLLWSEALLKWIENLRHHATFGTDPALVTMEREVTLAIAGDWGT GPFNSHAPAVSVANQMQLANADFTIHLGDVYYAGTHSQEDTDMAGWPMGTHGSFTLNSNHEMYSGAHGYFKELAARFPGQ QGTSYFALINDDWLIVGLDTAYASDVMNLYMDGTLNKPQIEWMKGLPKRKKLMVLSHHQGFDITGHHKTALYQPVCDALG REPDYWYWGHLHNGIVYAAQGGLHARCAGHGAIPYGTTSELNGHSRVLFSETKDANDPDYPLRVLNGYAKIRLVGEEIFE EFIGEDGSVRWSST >Mature_413_residues SAVGHLKHEYDKVKLRLHGLFTRIEMAWMKLISELEPKEFEAIIKLLQRGHDQAQYVLKHGELPTDEPAVPWELAHGLSI LRIGNATPLPQSPDQLQTKVLKDGTLLGCRKWELLDLLWSEALLKWIENLRHHATFGTDPALVTMEREVTLAIAGDWGTG PFNSHAPAVSVANQMQLANADFTIHLGDVYYAGTHSQEDTDMAGWPMGTHGSFTLNSNHEMYSGAHGYFKELAARFPGQQ GTSYFALINDDWLIVGLDTAYASDVMNLYMDGTLNKPQIEWMKGLPKRKKLMVLSHHQGFDITGHHKTALYQPVCDALGR EPDYWYWGHLHNGIVYAAQGGLHARCAGHGAIPYGTTSELNGHSRVLFSETKDANDPDYPLRVLNGYAKIRLVGEEIFEE FIGEDGSVRWSST
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46367; Mature: 46236
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAVGHLKHEYDKVKLRLHGLFTRIEMAWMKLISELEPKEFEAIIKLLQRGHDQAQYVLK CCCHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHH HGELPTDEPAVPWELAHGLSILRIGNATPLPQSPDQLQTKVLKDGTLLGCRKWELLDLLW CCCCCCCCCCCCHHHHCCEEEEEECCCCCCCCCHHHHHHHHHCCCCEEECCHHHHHHHHH SEALLKWIENLRHHATFGTDPALVTMEREVTLAIAGDWGTGPFNSHAPAVSVANQMQLAN HHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHEEEC ADFTIHLGDVYYAGTHSQEDTDMAGWPMGTHGSFTLNSNHEMYSGAHGYFKELAARFPGQ CCEEEEECCEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCC QGTSYFALINDDWLIVGLDTAYASDVMNLYMDGTLNKPQIEWMKGLPKRKKLMVLSHHQG CCCEEEEEECCCEEEEEECHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCEEEEEECCCC FDITGHHKTALYQPVCDALGREPDYWYWGHLHNGIVYAAQGGLHARCAGHGAIPYGTTSE CCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEECCCCEEEECCCCCCCCCCCCC LNGHSRVLFSETKDANDPDYPLRVLNGYAKIRLVGEEIFEEFIGEDGSVRWSST CCCCEEEEEECCCCCCCCCCCHHHHCCCEEEEEEHHHHHHHHCCCCCCEEECCC >Mature Secondary Structure SAVGHLKHEYDKVKLRLHGLFTRIEMAWMKLISELEPKEFEAIIKLLQRGHDQAQYVLK CCHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHH HGELPTDEPAVPWELAHGLSILRIGNATPLPQSPDQLQTKVLKDGTLLGCRKWELLDLLW CCCCCCCCCCCCHHHHCCEEEEEECCCCCCCCCHHHHHHHHHCCCCEEECCHHHHHHHHH SEALLKWIENLRHHATFGTDPALVTMEREVTLAIAGDWGTGPFNSHAPAVSVANQMQLAN HHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHEEEC ADFTIHLGDVYYAGTHSQEDTDMAGWPMGTHGSFTLNSNHEMYSGAHGYFKELAARFPGQ CCEEEEECCEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCC QGTSYFALINDDWLIVGLDTAYASDVMNLYMDGTLNKPQIEWMKGLPKRKKLMVLSHHQG CCCEEEEEECCCEEEEEECHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCEEEEEECCCC FDITGHHKTALYQPVCDALGREPDYWYWGHLHNGIVYAAQGGLHARCAGHGAIPYGTTSE CCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEECCCCEEEECCCCCCCCCCCCC LNGHSRVLFSETKDANDPDYPLRVLNGYAKIRLVGEEIFEEFIGEDGSVRWSST CCCCEEEEEECCCCCCCCCCCHHHHCCCEEEEEEHHHHHHHHCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA