Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

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The map label for this gene is 77461439

Identifier: 77461439

GI number: 77461439

Start: 5867666

End: 5869534

Strand: Reverse

Name: 77461439

Synonym: Pfl01_5218

Alternate gene names: NA

Gene position: 5869534-5867666 (Counterclockwise)

Preceding gene: 77461440

Following gene: 77461438

Centisome position: 91.16

GC content: 62.28

Gene sequence:

>1869_bases
ATGGACAGCTACATCCGCTGGTTTCAACGCTTCATCTGGCTCGGCATTGCGATGAACATGGTGTTCGCGATCCCGGCGCT
GTTCGCGCCGGGGTTGCTGACATCGGTGGTCGGCCTGCCGCCGCAACTCTCCGACCCGTGGCTGGAAAACGCCGGAATGC
TGCTGGTCGGCATCAGCGTGTTCTACATGCCGTCGGGCTTCGACGCGCCGCGCTACGTGGTGCATTCCTGGTTGTGCGTG
CTGACGCGGCTGATTGCGGTGGTGTTCTGGATCTACCTGATCAACACCAGCAGCCAGGGTTCGGTGTTCGTGCCGATGCT
GATGGGTGACCTGAGCTTTTTCCTGATCCTCGGCATCCTGCTGTACCTCGGCACCCCCCCTGAAAACCGACCCCTGGCGC
TGCTGTGTGACGGCTGGCGCGAATGGCGGGCGGCGTGGGCGCGGCAGTGGCAGAGTCACGCGTTCAAAGTCGGCACCCTG
ATCGTGGTGGCGCTGCTGGCGTTCATCGGTTACCAGACCTGGTATCAGATGCTGCGCGTGGTGCCGGAGCAGGATTACTC
CTCAGACGAAGATCACTACAAGTACGCCGCGATTGGCCTGGGTATCGAGGCGCGGATTCCCTATTACCTGTTCTCCGTGC
TGCCACAAATGTGCCCGGAAAAACTGCCGAAACCCGGTGGCTGGGAAGTCTTCGGTTTCCTGTTCGAGAACGGCAAGGAC
CTGCCGATCGGCATGGCCAAGCGGCAGATCGGCTACCCGACCGTCGAGCCGAACTGCGCGCTGTGCCACACCGGTTCCTA
CCGGGCGAATGCCAGCGACGTTGCGGTGAATGTGCCGAGCGCGCCGGCCAACACCCTGCAACTGCAGGCCTTCCAGTGGT
TCGCCTACGATTGCGCCAGCGATCCGAAATTCACCACCGACGCGGTGATGGCGGCGATCAACAGCAAATTCCAGCTGGGC
TTTTTCGAGAAGCTCTACAACCGCTACCTGATCATCCCGATGGCCAAGACCGCGCTGCTCAAACAGAAGCAGGCCTACGC
CTGGCAGAAGCTGCGCCCGCAACAGGGGCCGGGGCGCACCGACACCTTCAACCCGACGAAAATGGTGGTGTTCGGCTTCC
CGGATGACTCGACCATCGGCACTGTCGACCTGCCGCAAGTGTGGAACCAGAAACCCCGGGAATCGATGTACCTGCACTGG
GACGGCAATAACAACAAGATCCACGAGCGCAACTACGCCGCTGCGATGGCGGTGGGCGCGACGCCGGAGTCGGTGCTGCC
GCCGAGTTTCAACCGGGTGACCAACTGGCTGCTCGGGCACAAGGCGCCGGCGTGGCCGTGGGCACTGGATCAGGCAAAAG
TCGCCCAGGGCAAACCGGTGTGGGAGGCTAACTGCGCGGGTTGTCACGATTTCGGTCGCGTCGATACCGGGCAAGTCACC
ACCAACATCGACCAGCTCGGCACCGATCCGCACCGGCTGAACTCGTTCACCACCGGGCTGGTAGCGGCGTTCCACACCTT
CAAGAAACCGCCGTTCGATTTCGGTGCCTATCGCAAGACCCAGAGCTACAGCAACACGCCCACCGACGGCATCTGGCTGC
GTGCGCCGTACCTGCACAACGGTTCGGTGCCGACCCTGTGGGACTTGCTGCAACCGCCGGAAAAACGTCCGCAGGTGTTC
ATCACCGGCTCCGATGTCTACGACCCGGTCAACGTCGGCTTCGTGACGAGTGGCGCCCAGGCCAAAGCCTCGGCGGATTT
CACCTACGACACGCGTCTGGAAGGCAACCACAACAGCGGTCACCTGTACGGCACGACGCTGTCGGACGACGACAAGCGTG
CGCTGATCGAATTCATGAAAACCCTGTGA

Upstream 100 bases:

>100_bases
TGGACGCTCTGCGTCCGCTTTTGTGACGCGGAGCGTCACGAGATGCATTCCCCCGCGGACGGTTCGACGCTTCGACGGGG
GAACGATCTGGGGAACTGAT

Downstream 100 bases:

>100_bases
ACCCTTACGGATAGAGGATTTCGCCATGTCAGCGGTCGGTCATCTGAAACACGAATACGACAAGGTCAAGCTGCGCCTGC
ACGGCTTGTTCACGCGCATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 622; Mature: 622

Protein sequence:

>622_residues
MDSYIRWFQRFIWLGIAMNMVFAIPALFAPGLLTSVVGLPPQLSDPWLENAGMLLVGISVFYMPSGFDAPRYVVHSWLCV
LTRLIAVVFWIYLINTSSQGSVFVPMLMGDLSFFLILGILLYLGTPPENRPLALLCDGWREWRAAWARQWQSHAFKVGTL
IVVALLAFIGYQTWYQMLRVVPEQDYSSDEDHYKYAAIGLGIEARIPYYLFSVLPQMCPEKLPKPGGWEVFGFLFENGKD
LPIGMAKRQIGYPTVEPNCALCHTGSYRANASDVAVNVPSAPANTLQLQAFQWFAYDCASDPKFTTDAVMAAINSKFQLG
FFEKLYNRYLIIPMAKTALLKQKQAYAWQKLRPQQGPGRTDTFNPTKMVVFGFPDDSTIGTVDLPQVWNQKPRESMYLHW
DGNNNKIHERNYAAAMAVGATPESVLPPSFNRVTNWLLGHKAPAWPWALDQAKVAQGKPVWEANCAGCHDFGRVDTGQVT
TNIDQLGTDPHRLNSFTTGLVAAFHTFKKPPFDFGAYRKTQSYSNTPTDGIWLRAPYLHNGSVPTLWDLLQPPEKRPQVF
ITGSDVYDPVNVGFVTSGAQAKASADFTYDTRLEGNHNSGHLYGTTLSDDDKRALIEFMKTL

Sequences:

>Translated_622_residues
MDSYIRWFQRFIWLGIAMNMVFAIPALFAPGLLTSVVGLPPQLSDPWLENAGMLLVGISVFYMPSGFDAPRYVVHSWLCV
LTRLIAVVFWIYLINTSSQGSVFVPMLMGDLSFFLILGILLYLGTPPENRPLALLCDGWREWRAAWARQWQSHAFKVGTL
IVVALLAFIGYQTWYQMLRVVPEQDYSSDEDHYKYAAIGLGIEARIPYYLFSVLPQMCPEKLPKPGGWEVFGFLFENGKD
LPIGMAKRQIGYPTVEPNCALCHTGSYRANASDVAVNVPSAPANTLQLQAFQWFAYDCASDPKFTTDAVMAAINSKFQLG
FFEKLYNRYLIIPMAKTALLKQKQAYAWQKLRPQQGPGRTDTFNPTKMVVFGFPDDSTIGTVDLPQVWNQKPRESMYLHW
DGNNNKIHERNYAAAMAVGATPESVLPPSFNRVTNWLLGHKAPAWPWALDQAKVAQGKPVWEANCAGCHDFGRVDTGQVT
TNIDQLGTDPHRLNSFTTGLVAAFHTFKKPPFDFGAYRKTQSYSNTPTDGIWLRAPYLHNGSVPTLWDLLQPPEKRPQVF
ITGSDVYDPVNVGFVTSGAQAKASADFTYDTRLEGNHNSGHLYGTTLSDDDKRALIEFMKTL
>Mature_622_residues
MDSYIRWFQRFIWLGIAMNMVFAIPALFAPGLLTSVVGLPPQLSDPWLENAGMLLVGISVFYMPSGFDAPRYVVHSWLCV
LTRLIAVVFWIYLINTSSQGSVFVPMLMGDLSFFLILGILLYLGTPPENRPLALLCDGWREWRAAWARQWQSHAFKVGTL
IVVALLAFIGYQTWYQMLRVVPEQDYSSDEDHYKYAAIGLGIEARIPYYLFSVLPQMCPEKLPKPGGWEVFGFLFENGKD
LPIGMAKRQIGYPTVEPNCALCHTGSYRANASDVAVNVPSAPANTLQLQAFQWFAYDCASDPKFTTDAVMAAINSKFQLG
FFEKLYNRYLIIPMAKTALLKQKQAYAWQKLRPQQGPGRTDTFNPTKMVVFGFPDDSTIGTVDLPQVWNQKPRESMYLHW
DGNNNKIHERNYAAAMAVGATPESVLPPSFNRVTNWLLGHKAPAWPWALDQAKVAQGKPVWEANCAGCHDFGRVDTGQVT
TNIDQLGTDPHRLNSFTTGLVAAFHTFKKPPFDFGAYRKTQSYSNTPTDGIWLRAPYLHNGSVPTLWDLLQPPEKRPQVF
ITGSDVYDPVNVGFVTSGAQAKASADFTYDTRLEGNHNSGHLYGTTLSDDDKRALIEFMKTL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cytochrome c domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 69813; Mature: 69813

Theoretical pI: Translated: 7.57; Mature: 7.57

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSYIRWFQRFIWLGIAMNMVFAIPALFAPGLLTSVVGLPPQLSDPWLENAGMLLVGISV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCEEEEEEEH
FYMPSGFDAPRYVVHSWLCVLTRLIAVVFWIYLINTSSQGSVFVPMLMGDLSFFLILGIL
EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHH
LYLGTPPENRPLALLCDGWREWRAAWARQWQSHAFKVGTLIVVALLAFIGYQTWYQMLRV
HHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VPEQDYSSDEDHYKYAAIGLGIEARIPYYLFSVLPQMCPEKLPKPGGWEVFGFLFENGKD
CCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCC
LPIGMAKRQIGYPTVEPNCALCHTGSYRANASDVAVNVPSAPANTLQLQAFQWFAYDCAS
CCCCHHHHHCCCCCCCCCCEEEECCCCCCCCCCEEEECCCCCCCCEEEEEEEEEEEECCC
DPKFTTDAVMAAINSKFQLGFFEKLYNRYLIIPMAKTALLKQKQAYAWQKLRPQQGPGRT
CCCCHHHHHHHHHCCCCCHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCC
DTFNPTKMVVFGFPDDSTIGTVDLPQVWNQKPRESMYLHWDGNNNKIHERNYAAAMAVGA
CCCCCCEEEEEECCCCCCCCCEECHHHHCCCCCCCEEEEECCCCCCEECCCCEEEEEECC
TPESVLPPSFNRVTNWLLGHKAPAWPWALDQAKVAQGKPVWEANCAGCHDFGRVDTGQVT
CCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCEE
TNIDQLGTDPHRLNSFTTGLVAAFHTFKKPPFDFGAYRKTQSYSNTPTDGIWLRAPYLHN
ECHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCEECC
GSVPTLWDLLQPPEKRPQVFITGSDVYDPVNVGFVTSGAQAKASADFTYDTRLEGNHNSG
CCCCHHHHHHCCCCCCCEEEEECCCCCCCCCCCEEECCCCCCCCCCCEEEEEECCCCCCC
HLYGTTLSDDDKRALIEFMKTL
EEEEECCCCCHHHHHHHHHHHC
>Mature Secondary Structure
MDSYIRWFQRFIWLGIAMNMVFAIPALFAPGLLTSVVGLPPQLSDPWLENAGMLLVGISV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCEEEEEEEH
FYMPSGFDAPRYVVHSWLCVLTRLIAVVFWIYLINTSSQGSVFVPMLMGDLSFFLILGIL
EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHH
LYLGTPPENRPLALLCDGWREWRAAWARQWQSHAFKVGTLIVVALLAFIGYQTWYQMLRV
HHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VPEQDYSSDEDHYKYAAIGLGIEARIPYYLFSVLPQMCPEKLPKPGGWEVFGFLFENGKD
CCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCC
LPIGMAKRQIGYPTVEPNCALCHTGSYRANASDVAVNVPSAPANTLQLQAFQWFAYDCAS
CCCCHHHHHCCCCCCCCCCEEEECCCCCCCCCCEEEECCCCCCCCEEEEEEEEEEEECCC
DPKFTTDAVMAAINSKFQLGFFEKLYNRYLIIPMAKTALLKQKQAYAWQKLRPQQGPGRT
CCCCHHHHHHHHHCCCCCHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCC
DTFNPTKMVVFGFPDDSTIGTVDLPQVWNQKPRESMYLHWDGNNNKIHERNYAAAMAVGA
CCCCCCEEEEEECCCCCCCCCEECHHHHCCCCCCCEEEEECCCCCCEECCCCEEEEEECC
TPESVLPPSFNRVTNWLLGHKAPAWPWALDQAKVAQGKPVWEANCAGCHDFGRVDTGQVT
CCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCEE
TNIDQLGTDPHRLNSFTTGLVAAFHTFKKPPFDFGAYRKTQSYSNTPTDGIWLRAPYLHN
ECHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCEECC
GSVPTLWDLLQPPEKRPQVFITGSDVYDPVNVGFVTSGAQAKASADFTYDTRLEGNHNSG
CCCCHHHHHHCCCCCCCEEEEECCCCCCCCCCCEEECCCCCCCCCCCEEEEEECCCCCCC
HLYGTTLSDDDKRALIEFMKTL
EEEEECCCCCHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]