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The map label for this gene is mmgC [H]

Identifier: 77461387

GI number: 77461387

Start: 5807614

End: 5809392

Strand: Reverse

Name: mmgC [H]

Synonym: Pfl01_5166

Alternate gene names: 77461387

Gene position: 5809392-5807614 (Counterclockwise)

Preceding gene: 77461388

Following gene: 77461385

Centisome position: 90.23

GC content: 62.73

Gene sequence:

>1779_bases
ATGGCTGACTACAAAGCGCCGCTGCGCGATATGCGCTTCGTCCTCAATGAAGTGTTCGAAGTCGCCAAACTCTGGGCCGA
ACTGCCGGCCCTGGCCGAGACCGTGGACGCGGAAACCGTTGAAGCCATTCTCGAAGAGGCCGGCAAGGTCACCAGCAAAA
GCATTGCGCCCCTGAGCCGTGCCGCCGATGAAGAAGGCTGCCACTGGGCCGACGGTGCCGTCACGACGCCGGCCGGTTTT
CCACAGGCTTATCAGACTTATGCCGAAGGCGGCTGGGTCGGTGTTGGCGGTGATCCGGCCTACGGCGGCATGGGCATGCC
AAAAGCTGTCTCGGCCCAGGTCGAAGAAATGGTCAACTCCGCCAGCCTGTCCTTCGGTCTGTACCCGATGCTGACCGCCG
GCGCTTGCCTGTCGATCAACGCCCACGCCAGCGAAGAACTGAAAGCCGCTTACTTGCCGAACATGTACGCCGGTGTCTGG
GCTGGTTCCATGTGCCTGACCGAGCCACACGCCGGCACCGACCTGGGCATCATTCGCACCAAGGCCGAACCTCAGGCTGA
CGGTTCCTACAAGGTCAGCGGCACCAAGATCTTCATCACCGGCGGTGAGCACGACCTGACCGAAAACATCATTCACCTGG
TGCTGGCCAAACTGCCGGACGCACCGGCGGGGCCGAAAGGCATTTCGCTGTTCCTGGTGCCGAAGTTCATGGTCAATGCC
GATGGCAGCCTGGGCGCGCGCAACCCGGCGAACTGCGGTTCGATCGAACACAAGATGGGCATCCAGGCGTCCGCTACGTG
CGTGATGAACTTCGACGAAGCCGTGGGTTACCTGGTCGGCGAGCCAAACAAGGGCCTGGCCGCGATGTTCACCATGATGA
ACTACGAGCGTCTGGGCGTCGGCATCCAGGGCCTGGCCACCGGCGAGCGCTCGTACCAGAACGCCATCGAATACGCCCGT
GACCGCCTGCAAAGTCGTTCGCCGACCGGCGCGCAGAACAAGGACAAGGTGGCCGACCCGATCATTGTCCACCCGGACGT
GCGTCGTATGCTGTTGACCATGAAAGCCTCGAACGAAGGCGGCCGTGCGTTCTCCACTTACGTGGCGATGCAGCTCGACA
CCGCCAAGTTCAGCGAAGACGCCGCGACCCGCAAACGTGCGGAAGATCTGGTGGCCTTGCTGACGCCAGTGGCCAAGGCG
TTCCTGACCGATCTTGGACTGGAAACCACCGTCCACGGCCAGCAGATCTTCGGCGGCCACGGCTACATCCGTGAGTGGGG
CCAGGAGCAACTGGTGCGTGACGTGCGCATCACCCAGATCTACGAAGGCACCAACGGCATTCAGGCGCTGGACCTGGTGG
GGCGCAAGATCGTCGGCAGCGGCGGCGCGTTCTACAAACTGTTCGCCGACGAGATCCGCCATTTCACCGCAACCGCCAGT
GCCGATCTGGGCGAGTTCACCAAGCCGCTGAATGACGCCGTCGACACCCTCGACGAGCTGACCTCATGGCTGCTGGACCG
GGCGAAAACCAACCCGAACGAAATCGGCGCGGCGTCGGTCGAGTATCTGCAAGTATTCGGCTACACCGCTTACGCGTACA
TGTGGGCGCTGATGGCCAAGGCGTCGCTGGGCAAAGAAGCGCAGGACGATTTCTACGCGAGCAAGCTCGGCACGGCGCGG
TTCTATTTCGCCCGTCTGCTGCCGCGGATTCACTCGTTGAGCGCGTCGGTGAAGGCCGGCAGCGAGTCGCTGTTCCTGCT
GGACGCTGCGCAGTTCTGA

Upstream 100 bases:

>100_bases
TCGCCTGACCCTATGTGTCGCAAAAGTTGTTGGGTTACACTCCAGCTCAACGAAATCACCCTTCCACGAATCACCTGTTT
AGATCTTTGCGAGGTTTGCC

Downstream 100 bases:

>100_bases
TGATGTAACGTCATGTAAGCGATCTCTTACATGACGTGCTGCTGTTCTCCCATAGGCGTAGATTGGATCCAGAGCTAATC
TACTTTCCATGGACGTCGCG

Product: acyl-CoA dehydrogenase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 592; Mature: 591

Protein sequence:

>592_residues
MADYKAPLRDMRFVLNEVFEVAKLWAELPALAETVDAETVEAILEEAGKVTSKSIAPLSRAADEEGCHWADGAVTTPAGF
PQAYQTYAEGGWVGVGGDPAYGGMGMPKAVSAQVEEMVNSASLSFGLYPMLTAGACLSINAHASEELKAAYLPNMYAGVW
AGSMCLTEPHAGTDLGIIRTKAEPQADGSYKVSGTKIFITGGEHDLTENIIHLVLAKLPDAPAGPKGISLFLVPKFMVNA
DGSLGARNPANCGSIEHKMGIQASATCVMNFDEAVGYLVGEPNKGLAAMFTMMNYERLGVGIQGLATGERSYQNAIEYAR
DRLQSRSPTGAQNKDKVADPIIVHPDVRRMLLTMKASNEGGRAFSTYVAMQLDTAKFSEDAATRKRAEDLVALLTPVAKA
FLTDLGLETTVHGQQIFGGHGYIREWGQEQLVRDVRITQIYEGTNGIQALDLVGRKIVGSGGAFYKLFADEIRHFTATAS
ADLGEFTKPLNDAVDTLDELTSWLLDRAKTNPNEIGAASVEYLQVFGYTAYAYMWALMAKASLGKEAQDDFYASKLGTAR
FYFARLLPRIHSLSASVKAGSESLFLLDAAQF

Sequences:

>Translated_592_residues
MADYKAPLRDMRFVLNEVFEVAKLWAELPALAETVDAETVEAILEEAGKVTSKSIAPLSRAADEEGCHWADGAVTTPAGF
PQAYQTYAEGGWVGVGGDPAYGGMGMPKAVSAQVEEMVNSASLSFGLYPMLTAGACLSINAHASEELKAAYLPNMYAGVW
AGSMCLTEPHAGTDLGIIRTKAEPQADGSYKVSGTKIFITGGEHDLTENIIHLVLAKLPDAPAGPKGISLFLVPKFMVNA
DGSLGARNPANCGSIEHKMGIQASATCVMNFDEAVGYLVGEPNKGLAAMFTMMNYERLGVGIQGLATGERSYQNAIEYAR
DRLQSRSPTGAQNKDKVADPIIVHPDVRRMLLTMKASNEGGRAFSTYVAMQLDTAKFSEDAATRKRAEDLVALLTPVAKA
FLTDLGLETTVHGQQIFGGHGYIREWGQEQLVRDVRITQIYEGTNGIQALDLVGRKIVGSGGAFYKLFADEIRHFTATAS
ADLGEFTKPLNDAVDTLDELTSWLLDRAKTNPNEIGAASVEYLQVFGYTAYAYMWALMAKASLGKEAQDDFYASKLGTAR
FYFARLLPRIHSLSASVKAGSESLFLLDAAQF
>Mature_591_residues
ADYKAPLRDMRFVLNEVFEVAKLWAELPALAETVDAETVEAILEEAGKVTSKSIAPLSRAADEEGCHWADGAVTTPAGFP
QAYQTYAEGGWVGVGGDPAYGGMGMPKAVSAQVEEMVNSASLSFGLYPMLTAGACLSINAHASEELKAAYLPNMYAGVWA
GSMCLTEPHAGTDLGIIRTKAEPQADGSYKVSGTKIFITGGEHDLTENIIHLVLAKLPDAPAGPKGISLFLVPKFMVNAD
GSLGARNPANCGSIEHKMGIQASATCVMNFDEAVGYLVGEPNKGLAAMFTMMNYERLGVGIQGLATGERSYQNAIEYARD
RLQSRSPTGAQNKDKVADPIIVHPDVRRMLLTMKASNEGGRAFSTYVAMQLDTAKFSEDAATRKRAEDLVALLTPVAKAF
LTDLGLETTVHGQQIFGGHGYIREWGQEQLVRDVRITQIYEGTNGIQALDLVGRKIVGSGGAFYKLFADEIRHFTATASA
DLGEFTKPLNDAVDTLDELTSWLLDRAKTNPNEIGAASVEYLQVFGYTAYAYMWALMAKASLGKEAQDDFYASKLGTARF
YFARLLPRIHSLSASVKAGSESLFLLDAAQF

Specific function: Unknown

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4501859, Length=415, Percent_Identity=25.7831325301205, Blast_Score=106, Evalue=7e-23,
Organism=Homo sapiens, GI4557233, Length=441, Percent_Identity=27.2108843537415, Blast_Score=100, Evalue=7e-21,
Organism=Homo sapiens, GI4501857, Length=386, Percent_Identity=27.720207253886, Blast_Score=99, Evalue=9e-21,
Organism=Homo sapiens, GI4557235, Length=408, Percent_Identity=27.2058823529412, Blast_Score=99, Evalue=1e-20,
Organism=Homo sapiens, GI76496475, Length=408, Percent_Identity=27.2058823529412, Blast_Score=99, Evalue=2e-20,
Organism=Homo sapiens, GI21361497, Length=372, Percent_Identity=26.0752688172043, Blast_Score=94, Evalue=4e-19,
Organism=Homo sapiens, GI7656849, Length=375, Percent_Identity=25.8666666666667, Blast_Score=92, Evalue=2e-18,
Organism=Homo sapiens, GI4557231, Length=364, Percent_Identity=26.6483516483516, Blast_Score=87, Evalue=5e-17,
Organism=Homo sapiens, GI187960098, Length=364, Percent_Identity=26.6483516483516, Blast_Score=87, Evalue=5e-17,
Organism=Homo sapiens, GI226958412, Length=372, Percent_Identity=24.7311827956989, Blast_Score=86, Evalue=1e-16,
Organism=Homo sapiens, GI226958414, Length=372, Percent_Identity=24.7311827956989, Blast_Score=85, Evalue=2e-16,
Organism=Escherichia coli, GI87082384, Length=307, Percent_Identity=27.0358306188925, Blast_Score=110, Evalue=2e-25,
Organism=Escherichia coli, GI87081958, Length=336, Percent_Identity=26.1904761904762, Blast_Score=67, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17534899, Length=364, Percent_Identity=29.1208791208791, Blast_Score=113, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI17569725, Length=362, Percent_Identity=28.7292817679558, Blast_Score=111, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI17533517, Length=429, Percent_Identity=25.4079254079254, Blast_Score=103, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI17538396, Length=410, Percent_Identity=27.5609756097561, Blast_Score=97, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17508101, Length=369, Percent_Identity=27.6422764227642, Blast_Score=94, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI71985184, Length=373, Percent_Identity=26.0053619302949, Blast_Score=93, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI17506239, Length=384, Percent_Identity=26.5625, Blast_Score=92, Evalue=6e-19,
Organism=Caenorhabditis elegans, GI17570075, Length=364, Percent_Identity=25.8241758241758, Blast_Score=91, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17551932, Length=437, Percent_Identity=25.1716247139588, Blast_Score=82, Evalue=9e-16,
Organism=Caenorhabditis elegans, GI86563383, Length=305, Percent_Identity=25.5737704918033, Blast_Score=80, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI86563381, Length=305, Percent_Identity=25.5737704918033, Blast_Score=80, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI71990804, Length=242, Percent_Identity=29.7520661157025, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI71985192, Length=247, Percent_Identity=28.3400809716599, Blast_Score=76, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI32563615, Length=186, Percent_Identity=30.1075268817204, Blast_Score=71, Evalue=2e-12,
Organism=Drosophila melanogaster, GI21356377, Length=342, Percent_Identity=27.1929824561404, Blast_Score=97, Evalue=4e-20,
Organism=Drosophila melanogaster, GI281363737, Length=387, Percent_Identity=26.3565891472868, Blast_Score=96, Evalue=9e-20,
Organism=Drosophila melanogaster, GI24666513, Length=439, Percent_Identity=26.1958997722096, Blast_Score=94, Evalue=3e-19,
Organism=Drosophila melanogaster, GI24660351, Length=358, Percent_Identity=26.536312849162, Blast_Score=87, Evalue=5e-17,
Organism=Drosophila melanogaster, GI21355753, Length=435, Percent_Identity=24.367816091954, Blast_Score=85, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 63673; Mature: 63542

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADYKAPLRDMRFVLNEVFEVAKLWAELPALAETVDAETVEAILEEAGKVTSKSIAPLSR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
AADEEGCHWADGAVTTPAGFPQAYQTYAEGGWVGVGGDPAYGGMGMPKAVSAQVEEMVNS
CCCCCCCEECCCCEECCCCCHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHH
ASLSFGLYPMLTAGACLSINAHASEELKAAYLPNMYAGVWAGSMCLTEPHAGTDLGIIRT
HCCCCCCHHHHHCCCEEEECCCCCHHHHHHHCCCHHHHHHCCCEEECCCCCCCCCEEEEE
KAEPQADGSYKVSGTKIFITGGEHDLTENIIHLVLAKLPDAPAGPKGISLFLVPKFMVNA
CCCCCCCCCEEECCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEHEECC
DGSLGARNPANCGSIEHKMGIQASATCVMNFDEAVGYLVGEPNKGLAAMFTMMNYERLGV
CCCCCCCCCCCCCCCHHHCCCCCCCEEEEEHHHHHHHEECCCCCCHHHHHHHHHHHHHCC
GIQGLATGERSYQNAIEYARDRLQSRSPTGAQNKDKVADPIIVHPDVRRMLLTMKASNEG
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCHHHHHHHHHCCCCCC
GRAFSTYVAMQLDTAKFSEDAATRKRAEDLVALLTPVAKAFLTDLGLETTVHGQQIFGGH
CCEEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCEECCC
GYIREWGQEQLVRDVRITQIYEGTNGIQALDLVGRKIVGSGGAFYKLFADEIRHFTATAS
HHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC
ADLGEFTKPLNDAVDTLDELTSWLLDRAKTNPNEIGAASVEYLQVFGYTAYAYMWALMAK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ASLGKEAQDDFYASKLGTARFYFARLLPRIHSLSASVKAGSESLFLLDAAQF
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCC
>Mature Secondary Structure 
ADYKAPLRDMRFVLNEVFEVAKLWAELPALAETVDAETVEAILEEAGKVTSKSIAPLSR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
AADEEGCHWADGAVTTPAGFPQAYQTYAEGGWVGVGGDPAYGGMGMPKAVSAQVEEMVNS
CCCCCCCEECCCCEECCCCCHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHH
ASLSFGLYPMLTAGACLSINAHASEELKAAYLPNMYAGVWAGSMCLTEPHAGTDLGIIRT
HCCCCCCHHHHHCCCEEEECCCCCHHHHHHHCCCHHHHHHCCCEEECCCCCCCCCEEEEE
KAEPQADGSYKVSGTKIFITGGEHDLTENIIHLVLAKLPDAPAGPKGISLFLVPKFMVNA
CCCCCCCCCEEECCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEHEECC
DGSLGARNPANCGSIEHKMGIQASATCVMNFDEAVGYLVGEPNKGLAAMFTMMNYERLGV
CCCCCCCCCCCCCCCHHHCCCCCCCEEEEEHHHHHHHEECCCCCCHHHHHHHHHHHHHCC
GIQGLATGERSYQNAIEYARDRLQSRSPTGAQNKDKVADPIIVHPDVRRMLLTMKASNEG
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCHHHHHHHHHCCCCCC
GRAFSTYVAMQLDTAKFSEDAATRKRAEDLVALLTPVAKAFLTDLGLETTVHGQQIFGGH
CCEEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCEECCC
GYIREWGQEQLVRDVRITQIYEGTNGIQALDLVGRKIVGSGGAFYKLFADEIRHFTATAS
HHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC
ADLGEFTKPLNDAVDTLDELTSWLLDRAKTNPNEIGAASVEYLQVFGYTAYAYMWALMAK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ASLGKEAQDDFYASKLGTARFYFARLLPRIHSLSASVKAGSESLFLLDAAQF
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]