| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is dhaT [H]
Identifier: 77461342
GI number: 77461342
Start: 5753505
End: 5754653
Strand: Reverse
Name: dhaT [H]
Synonym: Pfl01_5121
Alternate gene names: 77461342
Gene position: 5754653-5753505 (Counterclockwise)
Preceding gene: 77461343
Following gene: 77461341
Centisome position: 89.38
GC content: 63.62
Gene sequence:
>1149_bases ATGAGTCTTTCCTCGTTCAAGATCGCTCACAAACTGATCACCGGCGCCGGGGCCATCGAGCAACTGGCGGCCGAACTCAC GCGGCTGGACATCGACAACCCGCTGATCGTCACCGATGCCGCGCTGGTCAAGTCCGGCACGGTGGAGCTGGCGCTGGCGC AGATCGGCGAGCGCGAGTACGAAATCTTCGACCGGGTATTGCCGGATCCGGAAATCGCCATCGTCGAGGATTGCATGCGC GTCTACCGCGAAGGCGGGCATGACGGTCTGATTGGCCTCGGTGGCGGCAGTGCCATCGACATCGCCAAGAGCGTCGCGGC GTACGCCGGCTATCACGGTGCGCTGGAAGATCTGTTCGGCGTCGATCAGGTGCCGCGCAAAGGCCCACCGTTGATTGCGA TCCCGACCACTGCCGGCACCGGTTCTGAAGTGACCAACGTCGCCATCCTTTCGGACAAGGTCGCCCAACTGAAGAAAGGC ATCGTCAGCGATTACCTGTTGCCGGACGTGGCGCTGGTCAGTCCGCAGATGACCCTGACCTGCCCGCGCAGTGTCACCGC CGCCAGTGGCGTCGATGCGCTGGTGCATGCCATCGAATCCTATCTGTCACTGAATGCCTCGCCGATCACCGATTCGCTGG CCATCGGCGCAATCAAGTTGATCGCCCGGTCCTTGCCCAAGGCCTACGCGAACCCCTCCAACCTGCAGGCCAGGGAAGAC ATGGCCACTGCCAGCCTGATGGCCGGCATGGCGTTCGGCAATGCCGGGGTCGGCGCGGTGCATGCGCTGGCGTATCCGCT GGGCGGGCGATTCAACATTGCTCACGGCGTCAGCAATGCGTTGCTGCTGCCGTATGTCATGACCTGGAACAAGATGGCCT GCGTCGAACGGATGCAGGATATCGCCGAAGCCATGGGGGTGAAGACCGCTCATCTGAGTCTCAATGAAGCGGCCGACAGC GCCGTCGCCGCGATGACCGAGCTCTGTGCGGCGGTGGAAATCCCGCTGGGTCTGCGCAGTTTCGGCGTGCCCGAAGAAGC GATCCCGGCCATGGCCGTGGAGGCAGCGGGAATCGAGCGCCTGATGCGCAACAACCCGCGCAAGCTCAGCGCCGCCGACA TCGAGAAGATCTACCGGGCGGCGTACTGA
Upstream 100 bases:
>100_bases CAATCCGGGTTGTCTGCCATTCATGCGCTGAATGACAGACAACCCGATTTCCCCAGCTACGCTTGTGCTCAGCTCCCACA TCTATAAGAGGCTGCGCACG
Downstream 100 bases:
>100_bases GAACCCGCCGGTCATCGGTCATGGCACAACCCAATCATCGCGGTCACGGTGCGCGCGCGGAAACTTGAGGTATACAATGC GCGCCATCGTGATTTAGCTC
Product: Iron-containing alcohol dehydrogenase
Products: NA
Alternate protein names: 1,3-propanediol oxidoreductase; 3-hydroxypropionaldehyde reductase [H]
Number of amino acids: Translated: 382; Mature: 381
Protein sequence:
>382_residues MSLSSFKIAHKLITGAGAIEQLAAELTRLDIDNPLIVTDAALVKSGTVELALAQIGEREYEIFDRVLPDPEIAIVEDCMR VYREGGHDGLIGLGGGSAIDIAKSVAAYAGYHGALEDLFGVDQVPRKGPPLIAIPTTAGTGSEVTNVAILSDKVAQLKKG IVSDYLLPDVALVSPQMTLTCPRSVTAASGVDALVHAIESYLSLNASPITDSLAIGAIKLIARSLPKAYANPSNLQARED MATASLMAGMAFGNAGVGAVHALAYPLGGRFNIAHGVSNALLLPYVMTWNKMACVERMQDIAEAMGVKTAHLSLNEAADS AVAAMTELCAAVEIPLGLRSFGVPEEAIPAMAVEAAGIERLMRNNPRKLSAADIEKIYRAAY
Sequences:
>Translated_382_residues MSLSSFKIAHKLITGAGAIEQLAAELTRLDIDNPLIVTDAALVKSGTVELALAQIGEREYEIFDRVLPDPEIAIVEDCMR VYREGGHDGLIGLGGGSAIDIAKSVAAYAGYHGALEDLFGVDQVPRKGPPLIAIPTTAGTGSEVTNVAILSDKVAQLKKG IVSDYLLPDVALVSPQMTLTCPRSVTAASGVDALVHAIESYLSLNASPITDSLAIGAIKLIARSLPKAYANPSNLQARED MATASLMAGMAFGNAGVGAVHALAYPLGGRFNIAHGVSNALLLPYVMTWNKMACVERMQDIAEAMGVKTAHLSLNEAADS AVAAMTELCAAVEIPLGLRSFGVPEEAIPAMAVEAAGIERLMRNNPRKLSAADIEKIYRAAY >Mature_381_residues SLSSFKIAHKLITGAGAIEQLAAELTRLDIDNPLIVTDAALVKSGTVELALAQIGEREYEIFDRVLPDPEIAIVEDCMRV YREGGHDGLIGLGGGSAIDIAKSVAAYAGYHGALEDLFGVDQVPRKGPPLIAIPTTAGTGSEVTNVAILSDKVAQLKKGI VSDYLLPDVALVSPQMTLTCPRSVTAASGVDALVHAIESYLSLNASPITDSLAIGAIKLIARSLPKAYANPSNLQAREDM ATASLMAGMAFGNAGVGAVHALAYPLGGRFNIAHGVSNALLLPYVMTWNKMACVERMQDIAEAMGVKTAHLSLNEAADSA VAAMTELCAAVEIPLGLRSFGVPEEAIPAMAVEAAGIERLMRNNPRKLSAADIEKIYRAAY
Specific function: Most active with substrates containing two primary alcohol groups separated by one or two carbon atoms. In the physiological direction, 3-hydroxypropionaldehyde is the preferred substrate [H]
COG id: COG1454
COG function: function code C; Alcohol dehydrogenase, class IV
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the iron-containing alcohol dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI133922590, Length=409, Percent_Identity=29.8288508557457, Blast_Score=152, Evalue=4e-37, Organism=Escherichia coli, GI48994951, Length=383, Percent_Identity=38.9033942558747, Blast_Score=249, Evalue=2e-67, Organism=Escherichia coli, GI1789163, Length=376, Percent_Identity=38.563829787234, Blast_Score=230, Evalue=1e-61, Organism=Escherichia coli, GI87082107, Length=381, Percent_Identity=37.7952755905512, Blast_Score=218, Evalue=5e-58, Organism=Escherichia coli, GI1787493, Length=347, Percent_Identity=32.8530259365994, Blast_Score=152, Evalue=5e-38, Organism=Escherichia coli, GI1789386, Length=392, Percent_Identity=26.530612244898, Blast_Score=103, Evalue=1e-23, Organism=Caenorhabditis elegans, GI17537053, Length=396, Percent_Identity=29.7979797979798, Blast_Score=145, Evalue=5e-35, Organism=Saccharomyces cerevisiae, GI6321181, Length=389, Percent_Identity=37.2750642673522, Blast_Score=219, Evalue=4e-58, Organism=Drosophila melanogaster, GI24657991, Length=405, Percent_Identity=29.3827160493827, Blast_Score=146, Evalue=2e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001670 - InterPro: IPR018211 [H]
Pfam domain/function: PF00465 Fe-ADH [H]
EC number: =1.1.1.202 [H]
Molecular weight: Translated: 39989; Mature: 39857
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLSSFKIAHKLITGAGAIEQLAAELTRLDIDNPLIVTDAALVKSGTVELALAQIGEREY CCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEECHHHHHCCCHHHHHHHHCCHHH EIFDRVLPDPEIAIVEDCMRVYREGGHDGLIGLGGGSAIDIAKSVAAYAGYHGALEDLFG HHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHCCHHHHHHHHC VDQVPRKGPPLIAIPTTAGTGSEVTNVAILSDKVAQLKKGIVSDYLLPDVALVSPQMTLT CCCCCCCCCCEEEECCCCCCCCHHHEEHHHHHHHHHHHHHHHHHHHCCCHHHCCCCEEEE CPRSVTAASGVDALVHAIESYLSLNASPITDSLAIGAIKLIARSLPKAYANPSNLQARED CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH MATASLMAGMAFGNAGVGAVHALAYPLGGRFNIAHGVSNALLLPYVMTWNKMACVERMQD HHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEHHHCCCCHHHHHHHHHHHHHHHHHHHHH IAEAMGVKTAHLSLNEAADSAVAAMTELCAAVEIPLGLRSFGVPEEAIPAMAVEAAGIER HHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHH LMRNNPRKLSAADIEKIYRAAY HHHCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure SLSSFKIAHKLITGAGAIEQLAAELTRLDIDNPLIVTDAALVKSGTVELALAQIGEREY CCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEECHHHHHCCCHHHHHHHHCCHHH EIFDRVLPDPEIAIVEDCMRVYREGGHDGLIGLGGGSAIDIAKSVAAYAGYHGALEDLFG HHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHCCHHHHHHHHC VDQVPRKGPPLIAIPTTAGTGSEVTNVAILSDKVAQLKKGIVSDYLLPDVALVSPQMTLT CCCCCCCCCCEEEECCCCCCCCHHHEEHHHHHHHHHHHHHHHHHHHCCCHHHCCCCEEEE CPRSVTAASGVDALVHAIESYLSLNASPITDSLAIGAIKLIARSLPKAYANPSNLQARED CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH MATASLMAGMAFGNAGVGAVHALAYPLGGRFNIAHGVSNALLLPYVMTWNKMACVERMQD HHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEHHHCCCCHHHHHHHHHHHHHHHHHHHHH IAEAMGVKTAHLSLNEAADSAVAAMTELCAAVEIPLGLRSFGVPEEAIPAMAVEAAGIER HHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHH LMRNNPRKLSAADIEKIYRAAY HHHCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7721705 [H]