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The map label for this gene is rpe [H]

Identifier: 77461341

GI number: 77461341

Start: 5752716

End: 5753390

Strand: Reverse

Name: rpe [H]

Synonym: Pfl01_5120

Alternate gene names: 77461341

Gene position: 5753390-5752716 (Counterclockwise)

Preceding gene: 77461342

Following gene: 77461340

Centisome position: 89.36

GC content: 62.81

Gene sequence:

>675_bases
ATGCAGCCCTTCGTTATTGCTCCGTCGATTCTTTCCGCCGACTTCGCCCGCCTGGGCGAGGAAGTGGACAACGTGCTGGC
CGCCGGTGCCGACTTCGTCCACTTCGATGTCATGGACAACCACTACGTACCGAACCTGACCATCGGCCCGATGGTCTGCG
CCGCGCTGCGCAAGTACGGCGTGACCGCGCCGATCGACGCGCACCTGATGGTCAGCCCGGTGGATCGCATCGTCGGCGAC
TTCATCGAGGCCGGCGCCACCTACATCACCTTCCACCCGGAAGCCACGCTGCACGTCGATCGTTCGCTGCAACTGATCCG
TGAAGGCGGCTGCAAATCCGGCCTGGTGTTCAACCCGGCGACCCCGCTGGACGTGCTCAAGTACGTGATCGACAAGGTCG
ACATGGTCTTGCTGATGAGCGTCAACCCGGGCTTCGGCGGGCAGAAATTCATCCCCGGCACCCTCGACAAGCTGCGTGAA
GCGCGGGCGATCATCGATGCCTCGGGCCGTGACATCCGCCTGGAAATCGACGGCGGCGTCAACGTCAACAACATCCGCGA
AATCGCCGCTGCCGGTGCCGACACCTTTGTCGCCGGTTCGGCGATCTTCAATGCGCCGAACTATCAGGAAGTCATCGACA
AGATGCGTTCCGAACTGGCGCTGGCTCGCCCATGA

Upstream 100 bases:

>100_bases
TCGGTCATGGCACAACCCAATCATCGCGGTCACGGTGCGCGCGCGGAAACTTGAGGTATACAATGCGCGCCATCGTGATT
TAGCTCAGAAAAGGTGCGTC

Downstream 100 bases:

>100_bases
GCGGTTTTGAGCAGCTGTTCCCGGGGCAACTGCCGCGGTTGGTGATGTTCGATCTGGATGGCACGCTGATCGATTCGGTA
CCCGACCTGGCGGCGGCTGT

Product: ribulose-phosphate 3-epimerase

Products: NA

Alternate protein names: Pentose-5-phosphate 3-epimerase; PPE; R5P3E [H]

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MQPFVIAPSILSADFARLGEEVDNVLAAGADFVHFDVMDNHYVPNLTIGPMVCAALRKYGVTAPIDAHLMVSPVDRIVGD
FIEAGATYITFHPEATLHVDRSLQLIREGGCKSGLVFNPATPLDVLKYVIDKVDMVLLMSVNPGFGGQKFIPGTLDKLRE
ARAIIDASGRDIRLEIDGGVNVNNIREIAAAGADTFVAGSAIFNAPNYQEVIDKMRSELALARP

Sequences:

>Translated_224_residues
MQPFVIAPSILSADFARLGEEVDNVLAAGADFVHFDVMDNHYVPNLTIGPMVCAALRKYGVTAPIDAHLMVSPVDRIVGD
FIEAGATYITFHPEATLHVDRSLQLIREGGCKSGLVFNPATPLDVLKYVIDKVDMVLLMSVNPGFGGQKFIPGTLDKLRE
ARAIIDASGRDIRLEIDGGVNVNNIREIAAAGADTFVAGSAIFNAPNYQEVIDKMRSELALARP
>Mature_224_residues
MQPFVIAPSILSADFARLGEEVDNVLAAGADFVHFDVMDNHYVPNLTIGPMVCAALRKYGVTAPIDAHLMVSPVDRIVGD
FIEAGATYITFHPEATLHVDRSLQLIREGGCKSGLVFNPATPLDVLKYVIDKVDMVLLMSVNPGFGGQKFIPGTLDKLRE
ARAIIDASGRDIRLEIDGGVNVNNIREIAAAGADTFVAGSAIFNAPNYQEVIDKMRSELALARP

Specific function: Unknown

COG id: COG0036

COG function: function code G; Pentose-5-phosphate-3-epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribulose-phosphate 3-epimerase family [H]

Homologues:

Organism=Homo sapiens, GI40385883, Length=222, Percent_Identity=40.990990990991, Blast_Score=156, Evalue=2e-38,
Organism=Homo sapiens, GI219879828, Length=222, Percent_Identity=39.6396396396396, Blast_Score=146, Evalue=1e-35,
Organism=Homo sapiens, GI24307923, Length=177, Percent_Identity=34.4632768361582, Blast_Score=93, Evalue=1e-19,
Organism=Escherichia coli, GI1789788, Length=220, Percent_Identity=76.3636363636364, Blast_Score=346, Evalue=7e-97,
Organism=Escherichia coli, GI1790523, Length=221, Percent_Identity=38.4615384615385, Blast_Score=163, Evalue=1e-41,
Organism=Escherichia coli, GI1790754, Length=216, Percent_Identity=29.6296296296296, Blast_Score=97, Evalue=7e-22,
Organism=Caenorhabditis elegans, GI17552948, Length=227, Percent_Identity=40.5286343612335, Blast_Score=153, Evalue=8e-38,
Organism=Saccharomyces cerevisiae, GI6322341, Length=228, Percent_Identity=39.0350877192982, Blast_Score=161, Evalue=7e-41,
Organism=Drosophila melanogaster, GI24586301, Length=211, Percent_Identity=36.9668246445498, Blast_Score=140, Evalue=7e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000056
- InterPro:   IPR011060 [H]

Pfam domain/function: PF00834 Ribul_P_3_epim [H]

EC number: =5.1.3.1 [H]

Molecular weight: Translated: 24149; Mature: 24149

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: PS01085 RIBUL_P_3_EPIMER_1 ; PS01086 RIBUL_P_3_EPIMER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPFVIAPSILSADFARLGEEVDNVLAAGADFVHFDVMDNHYVPNLTIGPMVCAALRKYG
CCCEEECHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCC
VTAPIDAHLMVSPVDRIVGDFIEAGATYITFHPEATLHVDRSLQLIREGGCKSGLVFNPA
CCCCCCCCEEECHHHHHHHHHHHCCCEEEEECCCEEEEHHHHHHHHHHCCCCCCEEECCC
TPLDVLKYVIDKVDMVLLMSVNPGFGGQKFIPGTLDKLREARAIIDASGRDIRLEIDGGV
CHHHHHHHHHHHHCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCC
NVNNIREIAAAGADTFVAGSAIFNAPNYQEVIDKMRSELALARP
CHHHHHHHHHCCCCHHEECHHHCCCCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MQPFVIAPSILSADFARLGEEVDNVLAAGADFVHFDVMDNHYVPNLTIGPMVCAALRKYG
CCCEEECHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCC
VTAPIDAHLMVSPVDRIVGDFIEAGATYITFHPEATLHVDRSLQLIREGGCKSGLVFNPA
CCCCCCCCEEECHHHHHHHHHHHCCCEEEEECCCEEEEHHHHHHHHHHCCCCCCEEECCC
TPLDVLKYVIDKVDMVLLMSVNPGFGGQKFIPGTLDKLREARAIIDASGRDIRLEIDGGV
CHHHHHHHHHHHHCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCC
NVNNIREIAAAGADTFVAGSAIFNAPNYQEVIDKMRSELALARP
CHHHHHHHHHCCCCHHEECHHHCCCCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]