| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77461200
Identifier: 77461200
GI number: 77461200
Start: 5610566
End: 5611156
Strand: Reverse
Name: 77461200
Synonym: Pfl01_4979
Alternate gene names: NA
Gene position: 5611156-5610566 (Counterclockwise)
Preceding gene: 77461201
Following gene: 77461195
Centisome position: 87.15
GC content: 61.93
Gene sequence:
>591_bases ATGAGTCTGCCGCTTTTTCCGCTGAACACGGTGCTGTTTCCCGGCTGCAATCTGGATTTGCAGATCTTCGAGGCGCGCTA CCTGGACATGATCGGCCGCTGCATGAAACAGGGCGGCGGGTTCGGCGTGGTGTGCATCCTGGAAGGCAGCGAAGTCGGTG TCGCGCCGGAAGGTTTCGCCATGGTCGGCTGCGAAGCGCGCATCACCGATTTCCAGCAGCAGGACAACGGACTGCTGGGC ATCCGGGTGCAGGGCGGGCGGCGCTTCATCGTGCAGCGCACTGAAGTGCAACGCGACCAATTGATCGTGGCCGAGGTCGA GTGGCTGGACGAAGAGCCCGAACAACCGTTGCAGGATGAAGACGCCGATCTGGTGGCGTTGCTCAAGGCCCTGGCCGAGC ACCCGATGGTCGAGGCGCTGAACATGGGTATCGAGGCTGCCGGGCAGCAGTCATTGGCCAATCAGCTGGCTTATCTGCTG CCGTTTGCCGAGGAAGACAAGATCGACCTGCTGCAACTCGATGATCCGCAGCAGCGGCTGGATGCGATCCAGGCGCTGCT CGATGAGTTGCAGGGCGAGCTGTTTGCCTAG
Upstream 100 bases:
>100_bases GAGTGCGGCGCCTTTGCGGCGCTGGCGATGAGTTTGATGGGCGTGGCCACGGCGGTGTTCCTGCCGTTGGCGGTGTCGAT GGTGGTGTAAGGAAATGTCT
Downstream 100 bases:
>100_bases AGCCAAAAACGCTATTCGGGCCAGATGATGTCGTTGGCGAACCACTCCTTGTCCTTGCCCAGTGTCAGTACCGGCTTGCC GGCCTGGGCGACCTTGTCGA
Product: peptidase S16, lon-like
Products: NA
Alternate protein names: ATP-Dependent Protease La; ATP-Dependent Protease La Domain-Containing Protein; Protease; ATP-Dependent Endopeptidase Lon; Peptidase S; ATP-Dependent Protease La Domain Protein
Number of amino acids: Translated: 196; Mature: 195
Protein sequence:
>196_residues MSLPLFPLNTVLFPGCNLDLQIFEARYLDMIGRCMKQGGGFGVVCILEGSEVGVAPEGFAMVGCEARITDFQQQDNGLLG IRVQGGRRFIVQRTEVQRDQLIVAEVEWLDEEPEQPLQDEDADLVALLKALAEHPMVEALNMGIEAAGQQSLANQLAYLL PFAEEDKIDLLQLDDPQQRLDAIQALLDELQGELFA
Sequences:
>Translated_196_residues MSLPLFPLNTVLFPGCNLDLQIFEARYLDMIGRCMKQGGGFGVVCILEGSEVGVAPEGFAMVGCEARITDFQQQDNGLLG IRVQGGRRFIVQRTEVQRDQLIVAEVEWLDEEPEQPLQDEDADLVALLKALAEHPMVEALNMGIEAAGQQSLANQLAYLL PFAEEDKIDLLQLDDPQQRLDAIQALLDELQGELFA >Mature_195_residues SLPLFPLNTVLFPGCNLDLQIFEARYLDMIGRCMKQGGGFGVVCILEGSEVGVAPEGFAMVGCEARITDFQQQDNGLLGI RVQGGRRFIVQRTEVQRDQLIVAEVEWLDEEPEQPLQDEDADLVALLKALAEHPMVEALNMGIEAAGQQSLANQLAYLLP FAEEDKIDLLQLDDPQQRLDAIQALLDELQGELFA
Specific function: Unknown
COG id: COG2802
COG function: function code R; Uncharacterized protein, similar to the N-terminal domain of Lon protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21670; Mature: 21539
Theoretical pI: Translated: 3.82; Mature: 3.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLPLFPLNTVLFPGCNLDLQIFEARYLDMIGRCMKQGGGFGVVCILEGSEVGVAPEGFA CCCCCCCHHHEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCEE MVGCEARITDFQQQDNGLLGIRVQGGRRFIVQRTEVQRDQLIVAEVEWLDEEPEQPLQDE EECCCHHHHHHHHCCCCEEEEEECCCCEEEEECCCCCCHHEEEEEEECCCCCCCCCCCCC DADLVALLKALAEHPMVEALNMGIEAAGQQSLANQLAYLLPFAEEDKIDLLQLDDPQQRL CHHHHHHHHHHHHCHHHHHHHCCHHHCCHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHH DAIQALLDELQGELFA HHHHHHHHHHHHHCCC >Mature Secondary Structure SLPLFPLNTVLFPGCNLDLQIFEARYLDMIGRCMKQGGGFGVVCILEGSEVGVAPEGFA CCCCCCHHHEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCEE MVGCEARITDFQQQDNGLLGIRVQGGRRFIVQRTEVQRDQLIVAEVEWLDEEPEQPLQDE EECCCHHHHHHHHCCCCEEEEEECCCCEEEEECCCCCCHHEEEEEEECCCCCCCCCCCCC DADLVALLKALAEHPMVEALNMGIEAAGQQSLANQLAYLLPFAEEDKIDLLQLDDPQQRL CHHHHHHHHHHHHCHHHHHHHCCHHHCCHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHH DAIQALLDELQGELFA HHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA