Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

Click here to switch to the map view.

The map label for this gene is 77461200

Identifier: 77461200

GI number: 77461200

Start: 5610566

End: 5611156

Strand: Reverse

Name: 77461200

Synonym: Pfl01_4979

Alternate gene names: NA

Gene position: 5611156-5610566 (Counterclockwise)

Preceding gene: 77461201

Following gene: 77461195

Centisome position: 87.15

GC content: 61.93

Gene sequence:

>591_bases
ATGAGTCTGCCGCTTTTTCCGCTGAACACGGTGCTGTTTCCCGGCTGCAATCTGGATTTGCAGATCTTCGAGGCGCGCTA
CCTGGACATGATCGGCCGCTGCATGAAACAGGGCGGCGGGTTCGGCGTGGTGTGCATCCTGGAAGGCAGCGAAGTCGGTG
TCGCGCCGGAAGGTTTCGCCATGGTCGGCTGCGAAGCGCGCATCACCGATTTCCAGCAGCAGGACAACGGACTGCTGGGC
ATCCGGGTGCAGGGCGGGCGGCGCTTCATCGTGCAGCGCACTGAAGTGCAACGCGACCAATTGATCGTGGCCGAGGTCGA
GTGGCTGGACGAAGAGCCCGAACAACCGTTGCAGGATGAAGACGCCGATCTGGTGGCGTTGCTCAAGGCCCTGGCCGAGC
ACCCGATGGTCGAGGCGCTGAACATGGGTATCGAGGCTGCCGGGCAGCAGTCATTGGCCAATCAGCTGGCTTATCTGCTG
CCGTTTGCCGAGGAAGACAAGATCGACCTGCTGCAACTCGATGATCCGCAGCAGCGGCTGGATGCGATCCAGGCGCTGCT
CGATGAGTTGCAGGGCGAGCTGTTTGCCTAG

Upstream 100 bases:

>100_bases
GAGTGCGGCGCCTTTGCGGCGCTGGCGATGAGTTTGATGGGCGTGGCCACGGCGGTGTTCCTGCCGTTGGCGGTGTCGAT
GGTGGTGTAAGGAAATGTCT

Downstream 100 bases:

>100_bases
AGCCAAAAACGCTATTCGGGCCAGATGATGTCGTTGGCGAACCACTCCTTGTCCTTGCCCAGTGTCAGTACCGGCTTGCC
GGCCTGGGCGACCTTGTCGA

Product: peptidase S16, lon-like

Products: NA

Alternate protein names: ATP-Dependent Protease La; ATP-Dependent Protease La Domain-Containing Protein; Protease; ATP-Dependent Endopeptidase Lon; Peptidase S; ATP-Dependent Protease La Domain Protein

Number of amino acids: Translated: 196; Mature: 195

Protein sequence:

>196_residues
MSLPLFPLNTVLFPGCNLDLQIFEARYLDMIGRCMKQGGGFGVVCILEGSEVGVAPEGFAMVGCEARITDFQQQDNGLLG
IRVQGGRRFIVQRTEVQRDQLIVAEVEWLDEEPEQPLQDEDADLVALLKALAEHPMVEALNMGIEAAGQQSLANQLAYLL
PFAEEDKIDLLQLDDPQQRLDAIQALLDELQGELFA

Sequences:

>Translated_196_residues
MSLPLFPLNTVLFPGCNLDLQIFEARYLDMIGRCMKQGGGFGVVCILEGSEVGVAPEGFAMVGCEARITDFQQQDNGLLG
IRVQGGRRFIVQRTEVQRDQLIVAEVEWLDEEPEQPLQDEDADLVALLKALAEHPMVEALNMGIEAAGQQSLANQLAYLL
PFAEEDKIDLLQLDDPQQRLDAIQALLDELQGELFA
>Mature_195_residues
SLPLFPLNTVLFPGCNLDLQIFEARYLDMIGRCMKQGGGFGVVCILEGSEVGVAPEGFAMVGCEARITDFQQQDNGLLGI
RVQGGRRFIVQRTEVQRDQLIVAEVEWLDEEPEQPLQDEDADLVALLKALAEHPMVEALNMGIEAAGQQSLANQLAYLLP
FAEEDKIDLLQLDDPQQRLDAIQALLDELQGELFA

Specific function: Unknown

COG id: COG2802

COG function: function code R; Uncharacterized protein, similar to the N-terminal domain of Lon protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21670; Mature: 21539

Theoretical pI: Translated: 3.82; Mature: 3.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLPLFPLNTVLFPGCNLDLQIFEARYLDMIGRCMKQGGGFGVVCILEGSEVGVAPEGFA
CCCCCCCHHHEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCEE
MVGCEARITDFQQQDNGLLGIRVQGGRRFIVQRTEVQRDQLIVAEVEWLDEEPEQPLQDE
EECCCHHHHHHHHCCCCEEEEEECCCCEEEEECCCCCCHHEEEEEEECCCCCCCCCCCCC
DADLVALLKALAEHPMVEALNMGIEAAGQQSLANQLAYLLPFAEEDKIDLLQLDDPQQRL
CHHHHHHHHHHHHCHHHHHHHCCHHHCCHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHH
DAIQALLDELQGELFA
HHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SLPLFPLNTVLFPGCNLDLQIFEARYLDMIGRCMKQGGGFGVVCILEGSEVGVAPEGFA
CCCCCCHHHEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCEE
MVGCEARITDFQQQDNGLLGIRVQGGRRFIVQRTEVQRDQLIVAEVEWLDEEPEQPLQDE
EECCCHHHHHHHHCCCCEEEEEECCCCEEEEECCCCCCHHEEEEEEECCCCCCCCCCCCC
DADLVALLKALAEHPMVEALNMGIEAAGQQSLANQLAYLLPFAEEDKIDLLQLDDPQQRL
CHHHHHHHHHHHHCHHHHHHHCCHHHCCHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHH
DAIQALLDELQGELFA
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA