| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77461149
Identifier: 77461149
GI number: 77461149
Start: 5552400
End: 5553527
Strand: Direct
Name: 77461149
Synonym: Pfl01_4928
Alternate gene names: NA
Gene position: 5552400-5553527 (Clockwise)
Preceding gene: 77461148
Following gene: 77461155
Centisome position: 86.24
GC content: 63.39
Gene sequence:
>1128_bases ATGGGTCTCGGGTATGCTCGGGACCACTTCCGTATCGCTATAAGCCGAGCCATGACCCGTCTACTGCGCTACATCCTGTT GCCCGTACTGTTCGTCCTCGCCCTGATCGGCACGCTGATCTACAGCCTGACCTGGCGCCCCGACGCCCGGGAAACCCTGC CGGTCAGTTGCACCGGGCAACCGCCGATGCTGGTCCCCGGCCAGGCCCTGAAAGTCATGACTTGGAACGTGCAATACCTG GCCGGCAAGCGCTACGTGTTCTGGAATGACCTGGCGCAAGGCGACGACGAAGCCCCGACTCCGGAAGACATGGCGTTCAG CCTCGATGAAGTGGCGCGGGTGATCCGCGACGAACAGCCCGACGTGGTGCTGTTGCAGGAACTGGATGACGGCGCCAAGG CCAGCGACTATCAGAACCAGCTCAAGCTGTTGCAGGAACGCCTCACCGACCTCTACCCGTGCAGTGCCCACGCCTTCGAC TGGAAGGCCGATTTCGTCCCGGATCCGCACATCTTCGGCAGCGTCGGCCGGCAACTCGCCACCCTCAGCCGCTACCGCAT CGAACACGCCGAACGCCTGCAATTGCCGGTGCAGCCGGCGAATTTCATCAGCCGTCAGTTCCAGCCGAAAGATGCCCTGC TCGCCACCACCCTGCCGCTCAGCGATGGCGGGCAACTGGTGGTGTTCAACACCCATCTGGATCGCGCCACCCAACCGGAC GACACCTTGCAGGCGCAGGTGACAGCGGTGGCCAAGGTTCTCGACAAACACGAAAGCCACGGCACGCCGTGGCTGATCGG GGGGGACTTCAATCTGTTACCGCTCGGCCAGTACCGGCGCCTGCCCACCGAGCAGCGCACGCCGTACTCCGCCGACAGTG CGCTGCATGTGCTGTGGGACAAGTACCCGATGATCCCGACCAACAACGAAGCCAGCGGCATCGACCGCGCCAAGTGGCTG ACCCATTACCCCAACGACCCCGGCCTCAACGGCCCGGACCGCACGGTCGACTATCTGTTCTACAGCCCGAAGATCAAACG GGTCGAAGCCACGGTGCGGCAGGACGATACCTTGCGCATTTCCGATCATCTGCCGGTGATTGCCAAGTTCCTCCTGCCGC CCAACTGA
Upstream 100 bases:
>100_bases TGTTCACCAGCGTGGTGCTGTTCCGCCTGTTCATGCTGATCAGCGAATTGCCCGACAAACGTGACGGAATAGTCTGACTG CACCGAGCTTGGGCTGATGG
Downstream 100 bases:
>100_bases CCTCAATGAGTCTCTTCGAGATCATCGTGCAACAGCCCGAAGATCTGCCGCTTCATGTCGATGAATGAGCGCTCCATCAC CATGTCCAGGGTGCGTGGGC
Product: endonuclease/exonuclease/phosphatase
Products: NA
Alternate protein names: Endonuclease/Exonuclease/Phosphatase Family Protein; Metal-Dependent Hydrolase; Endonuclease/Exonuclease/Phosphatase Family; Endonuclease-Exonuclease-Phosphatase Family Protein
Number of amino acids: Translated: 375; Mature: 374
Protein sequence:
>375_residues MGLGYARDHFRIAISRAMTRLLRYILLPVLFVLALIGTLIYSLTWRPDARETLPVSCTGQPPMLVPGQALKVMTWNVQYL AGKRYVFWNDLAQGDDEAPTPEDMAFSLDEVARVIRDEQPDVVLLQELDDGAKASDYQNQLKLLQERLTDLYPCSAHAFD WKADFVPDPHIFGSVGRQLATLSRYRIEHAERLQLPVQPANFISRQFQPKDALLATTLPLSDGGQLVVFNTHLDRATQPD DTLQAQVTAVAKVLDKHESHGTPWLIGGDFNLLPLGQYRRLPTEQRTPYSADSALHVLWDKYPMIPTNNEASGIDRAKWL THYPNDPGLNGPDRTVDYLFYSPKIKRVEATVRQDDTLRISDHLPVIAKFLLPPN
Sequences:
>Translated_375_residues MGLGYARDHFRIAISRAMTRLLRYILLPVLFVLALIGTLIYSLTWRPDARETLPVSCTGQPPMLVPGQALKVMTWNVQYL AGKRYVFWNDLAQGDDEAPTPEDMAFSLDEVARVIRDEQPDVVLLQELDDGAKASDYQNQLKLLQERLTDLYPCSAHAFD WKADFVPDPHIFGSVGRQLATLSRYRIEHAERLQLPVQPANFISRQFQPKDALLATTLPLSDGGQLVVFNTHLDRATQPD DTLQAQVTAVAKVLDKHESHGTPWLIGGDFNLLPLGQYRRLPTEQRTPYSADSALHVLWDKYPMIPTNNEASGIDRAKWL THYPNDPGLNGPDRTVDYLFYSPKIKRVEATVRQDDTLRISDHLPVIAKFLLPPN >Mature_374_residues GLGYARDHFRIAISRAMTRLLRYILLPVLFVLALIGTLIYSLTWRPDARETLPVSCTGQPPMLVPGQALKVMTWNVQYLA GKRYVFWNDLAQGDDEAPTPEDMAFSLDEVARVIRDEQPDVVLLQELDDGAKASDYQNQLKLLQERLTDLYPCSAHAFDW KADFVPDPHIFGSVGRQLATLSRYRIEHAERLQLPVQPANFISRQFQPKDALLATTLPLSDGGQLVVFNTHLDRATQPDD TLQAQVTAVAKVLDKHESHGTPWLIGGDFNLLPLGQYRRLPTEQRTPYSADSALHVLWDKYPMIPTNNEASGIDRAKWLT HYPNDPGLNGPDRTVDYLFYSPKIKRVEATVRQDDTLRISDHLPVIAKFLLPPN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42417; Mature: 42286
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLGYARDHFRIAISRAMTRLLRYILLPVLFVLALIGTLIYSLTWRPDARETLPVSCTGQ CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCEEECCC PPMLVPGQALKVMTWNVQYLAGKRYVFWNDLAQGDDEAPTPEDMAFSLDEVARVIRDEQP CCEEECCCEEEEEEEEEEEEECCEEEEECCCCCCCCCCCCCHHHHCCHHHHHHHHCCCCC DVVLLQELDDGAKASDYQNQLKLLQERLTDLYPCSAHAFDWKADFVPDPHIFGSVGRQLA CEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH TLSRYRIEHAERLQLPVQPANFISRQFQPKDALLATTLPLSDGGQLVVFNTHLDRATQPD HHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCEEEEECCCCCCCEEEEEECCCCCCCCCC DTLQAQVTAVAKVLDKHESHGTPWLIGGDFNLLPLGQYRRLPTEQRTPYSADSALHVLWD HHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEECHHHHCCCCCCCCCCCCCCHHEEHHH KYPMIPTNNEASGIDRAKWLTHYPNDPGLNGPDRTVDYLFYSPKIKRVEATVRQDDTLRI CCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHCCCCCEEE SDHLPVIAKFLLPPN CCCCHHHHHHCCCCC >Mature Secondary Structure GLGYARDHFRIAISRAMTRLLRYILLPVLFVLALIGTLIYSLTWRPDARETLPVSCTGQ CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCEEECCC PPMLVPGQALKVMTWNVQYLAGKRYVFWNDLAQGDDEAPTPEDMAFSLDEVARVIRDEQP CCEEECCCEEEEEEEEEEEEECCEEEEECCCCCCCCCCCCCHHHHCCHHHHHHHHCCCCC DVVLLQELDDGAKASDYQNQLKLLQERLTDLYPCSAHAFDWKADFVPDPHIFGSVGRQLA CEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH TLSRYRIEHAERLQLPVQPANFISRQFQPKDALLATTLPLSDGGQLVVFNTHLDRATQPD HHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCEEEEECCCCCCCEEEEEECCCCCCCCCC DTLQAQVTAVAKVLDKHESHGTPWLIGGDFNLLPLGQYRRLPTEQRTPYSADSALHVLWD HHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEECHHHHCCCCCCCCCCCCCCHHEEHHH KYPMIPTNNEASGIDRAKWLTHYPNDPGLNGPDRTVDYLFYSPKIKRVEATVRQDDTLRI CCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHCCCCCEEE SDHLPVIAKFLLPPN CCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA