| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77461148
Identifier: 77461148
GI number: 77461148
Start: 5551615
End: 5552376
Strand: Direct
Name: 77461148
Synonym: Pfl01_4927
Alternate gene names: NA
Gene position: 5551615-5552376 (Clockwise)
Preceding gene: 77461144
Following gene: 77461149
Centisome position: 86.23
GC content: 58.4
Gene sequence:
>762_bases ATGACCTTTACCGAACGTTTACGTTTGCGCAGCGAAACGGATCATCGGTTAAAGTGGGCCACTGTTTTTGACCTGCGATA CCGACTGATGAATGCCTTCGATGTGCTGCGCGACTCCCTGTATTTCTTCAAACGCAATCTGGGCCGGATCGTCCAGTTGT GCCTGCCGCTGGTGATTGTCGAAGCCGTGCTGCAACAGGTGGTAGACCATGCCAGCGATCCGGACGGCTACTCGGCCATC AGCGTGATCGTCGGCCTGCTGGTGTATCCGCTGTACACCGCCGCGCTGATTCTTTTCCTCGATGCCCGCACCCGCGGCGA ATCCCCGCAAACCCGCGATCTGCTGGCGATGGCCGCTCGTCTATGGCCGCGCTTCGCTCTGCTGACTGCACTGAACACGC TGTTGATCCTGCTCGGTCTTTCCCTGTACTTCCTGCCGGGGCTGTGGCTGATGGTCACTCTGGCCTTCGGTGAATATCTG CTGGTGCTGCGCGGTTACGGTCCGTTGCAGGCCATGAAGGAAAGCCTGCGCCTGAGCCGTGGGCATTTTCTGCGGATTCT GGTGTGCATTCTGTGTGTGATGGGGCCGCTGTGGCTGCTCAAGGGCCTGACTTTGCAGGTCTATCCCGATCCGCAGAATC CGTTGATTGCGGTGCTGATCGACAGCGGCCACAGCTTCCTGCAACTGTTCACCAGCGTGGTGCTGTTCCGCCTGTTCATG CTGATCAGCGAATTGCCCGACAAACGTGACGGAATAGTCTGA
Upstream 100 bases:
>100_bases GCTGTTCATGGCGACCTCGTAGATTGCCGGGGATAACGTTGCCCTCCTCCACGTCGGAGAAGGCGCACCTCTGTAATGGA GGCAGCAACAGAATGTTTCA
Downstream 100 bases:
>100_bases CTGCACCGAGCTTGGGCTGATGGATGGGTCTCGGGTATGCTCGGGACCACTTCCGTATCGCTATAAGCCGAGCCATGACC CGTCTACTGCGCTACATCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 253; Mature: 252
Protein sequence:
>253_residues MTFTERLRLRSETDHRLKWATVFDLRYRLMNAFDVLRDSLYFFKRNLGRIVQLCLPLVIVEAVLQQVVDHASDPDGYSAI SVIVGLLVYPLYTAALILFLDARTRGESPQTRDLLAMAARLWPRFALLTALNTLLILLGLSLYFLPGLWLMVTLAFGEYL LVLRGYGPLQAMKESLRLSRGHFLRILVCILCVMGPLWLLKGLTLQVYPDPQNPLIAVLIDSGHSFLQLFTSVVLFRLFM LISELPDKRDGIV
Sequences:
>Translated_253_residues MTFTERLRLRSETDHRLKWATVFDLRYRLMNAFDVLRDSLYFFKRNLGRIVQLCLPLVIVEAVLQQVVDHASDPDGYSAI SVIVGLLVYPLYTAALILFLDARTRGESPQTRDLLAMAARLWPRFALLTALNTLLILLGLSLYFLPGLWLMVTLAFGEYL LVLRGYGPLQAMKESLRLSRGHFLRILVCILCVMGPLWLLKGLTLQVYPDPQNPLIAVLIDSGHSFLQLFTSVVLFRLFM LISELPDKRDGIV >Mature_252_residues TFTERLRLRSETDHRLKWATVFDLRYRLMNAFDVLRDSLYFFKRNLGRIVQLCLPLVIVEAVLQQVVDHASDPDGYSAIS VIVGLLVYPLYTAALILFLDARTRGESPQTRDLLAMAARLWPRFALLTALNTLLILLGLSLYFLPGLWLMVTLAFGEYLL VLRGYGPLQAMKESLRLSRGHFLRILVCILCVMGPLWLLKGLTLQVYPDPQNPLIAVLIDSGHSFLQLFTSVVLFRLFML ISELPDKRDGIV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28839; Mature: 28708
Theoretical pI: Translated: 9.35; Mature: 9.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFTERLRLRSETDHRLKWATVFDLRYRLMNAFDVLRDSLYFFKRNLGRIVQLCLPLVIV CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EAVLQQVVDHASDPDGYSAISVIVGLLVYPLYTAALILFLDARTRGESPQTRDLLAMAAR HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH LWPRFALLTALNTLLILLGLSLYFLPGLWLMVTLAFGEYLLVLRGYGPLQAMKESLRLSR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC GHFLRILVCILCVMGPLWLLKGLTLQVYPDPQNPLIAVLIDSGHSFLQLFTSVVLFRLFM CHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHH LISELPDKRDGIV HHHHCCCCCCCCC >Mature Secondary Structure TFTERLRLRSETDHRLKWATVFDLRYRLMNAFDVLRDSLYFFKRNLGRIVQLCLPLVIV CHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EAVLQQVVDHASDPDGYSAISVIVGLLVYPLYTAALILFLDARTRGESPQTRDLLAMAAR HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH LWPRFALLTALNTLLILLGLSLYFLPGLWLMVTLAFGEYLLVLRGYGPLQAMKESLRLSR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC GHFLRILVCILCVMGPLWLLKGLTLQVYPDPQNPLIAVLIDSGHSFLQLFTSVVLFRLFM CHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHH LISELPDKRDGIV HHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA