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The map label for this gene is yraM [C]

Identifier: 77460905

GI number: 77460905

Start: 5288030

End: 5289841

Strand: Direct

Name: yraM [C]

Synonym: Pfl01_4684

Alternate gene names: 77460905

Gene position: 5288030-5289841 (Clockwise)

Preceding gene: 77460887

Following gene: 77460906

Centisome position: 82.13

GC content: 65.01

Gene sequence:

>1812_bases
ATGATCGCTTGCCTGCGGCTGTTCACTGCCCTCTGCCTCGCTGCCTTGCTGGCGGCTTGCGCCAGCTCCCCTTCCTCCAG
CCTTGGCGAACTTCCTCGGACCCCGGATGCCACCATCGAGCAATTGCTCGAACAGGCTGCCCAGGCCAAATCGCCGGACA
AGGCTGCGCTGTTGCGCCTGAGTGCGGCAGACATGGCGTACCGCCAGGGCAATGCCGGACAGTCCGCGCAAATCCTGCAG
CAAGTGCCGATGGAACAACTCCAGCCGGGCCAGCAGGCATTCGCCAGCACCCTGTCTGCTGAACTGGCCATGACCCGCAA
CCAGCCGAAAGCCGCGCTGACTGCCTTGAGCCATCCAAGCCTGCAACGCCTGAGCGAACTGTCCGTACCGCTGCAAGTTC
GCGCCGGCACGGTTCACGCCCGCGCCCTTGAAGCCGACGGCCAGACCCTGGCCGCTGCCCGCGAGCGCATCTTCATCGCG
CCGATGCTGGAAGGCGAAGCAGCCAGCAAGAACCACGAAGCGATCTGGACCCTGATTGCGTCGCTGCCGGCCGATCAACT
GCAAGCGAACACCACCGATGACCTCGGCGGCTGGATGAGCCTGGCCCTGGCCGTGAAAACCGCCGGCACCCTGGAACAGC
AGCAAGCCGCCATCGACAACTGGCGCAACCAGCATCCAAAGCACCCAGCCGCGATCAACCTGCCGCTGCCCCTGACCAAA
CTCAAGGAACTGGCCAGCCAGCCCCTGAGCAAGATCGCCCTGCTGTTGCCACAGGACGGCCAGTTGGCCTCGGTCGGCAA
GGCCCTGCGTGACGGCTTCATGGCCGCACACTATCAGGCTCAGCAAGCCGGCCAGAAACCACCGGCCATCGAGTTCTACG
ACAGCTCGAAACTGACCAATCTCGACGAGTTCTACCGCAAGGCCCAGGCCGATGGCGTGCAACTGGTCGTCGGCCCGCTG
GAGAAGCCGCTGGTCAAACAGTTGAGCACTCGCCCGCAACTGCCGATCACCACCCTCGCCCTGAACTACAGCGAAGGCGA
TCAAGGCCCGGCGCAGTTGTTCCAGTTCGGTCTGGCCGCTGAAGACGAAGCCCGCGAAGTCTCCCGCCGCGCCCGTGCAG
ACGGCCTGCACCGCGCCGCGATCATGGTGCCGAAAGGCGAATGGGGCGACCGCGTCCTGCGCGCGTTCAGCCAGGACTGG
CAAGCCAACGGCGGCAGCATTGTCGCCACCGAGCGCGTCGATCAGCCGGTGCAACTGGCCCAGCAGATCGCCGACATGTT
CCAACTGCGTCAGAGCGAAGCTCGCGCCAAGAGCCTGCAGAATGCTGCCGGCACCAACGTTGCCGCCCAGCCTTCGCGTC
GCCAGGACATCGAATTCATCTTCCTCGCCGCCACACCACAACAGGCGCAGCAAATCAAGCCGACCCTGAATTTCCAGTAC
GCCGGTGACGTGCCGGTCTACGCGACCTCCCACGTGTTCAGCGCCAGCGGCGACGTGAACCAGTACAACGACATGAACGG
CGTGCGCTTCTGCGAAACCCCGTGGCTGCTGGAAACCAGCGATCCGCTGCGTCAGCAGGTCACCGCGCAATGGCCACAAG
CCGCCGGCAGCCTCGGCCGCCTGTACGCGATGGGCGTCGATGCCTACCGCCTCGCGCCGCGCCTGGATCAGCTCAAGGCA
CTGCCGGACAGCCGCATTGAAGGTCAGTCGGGCAGCTTGGGCATGACTCAGTCCCAGCGAGTCGTACGTCAGTTGCCATG
GGCACAGTTCGTCAGCGGTCAGATCCAGCGCCTGCCGGACACTCCACGCTGA

Upstream 100 bases:

>100_bases
GTATCAGCTAAATTGACGGTTTCACGCCAGTAACATCGCGCCCCGGCCAGTGCTTGGGTACAATTCGACGCTAATTTGAT
CGAGTATCAGGAACACTTAC

Downstream 100 bases:

>100_bases
TGCCCGACAGGTCACACCTGCAAAGCGGCAAGGATGCCGAGCGCCAGGCGCTCGAGCATCTGCAACACCAGGGTCTGCGC
CTGCTGGCGCAGAACTGGTT

Product: LppC putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 603; Mature: 603

Protein sequence:

>603_residues
MIACLRLFTALCLAALLAACASSPSSSLGELPRTPDATIEQLLEQAAQAKSPDKAALLRLSAADMAYRQGNAGQSAQILQ
QVPMEQLQPGQQAFASTLSAELAMTRNQPKAALTALSHPSLQRLSELSVPLQVRAGTVHARALEADGQTLAAARERIFIA
PMLEGEAASKNHEAIWTLIASLPADQLQANTTDDLGGWMSLALAVKTAGTLEQQQAAIDNWRNQHPKHPAAINLPLPLTK
LKELASQPLSKIALLLPQDGQLASVGKALRDGFMAAHYQAQQAGQKPPAIEFYDSSKLTNLDEFYRKAQADGVQLVVGPL
EKPLVKQLSTRPQLPITTLALNYSEGDQGPAQLFQFGLAAEDEAREVSRRARADGLHRAAIMVPKGEWGDRVLRAFSQDW
QANGGSIVATERVDQPVQLAQQIADMFQLRQSEARAKSLQNAAGTNVAAQPSRRQDIEFIFLAATPQQAQQIKPTLNFQY
AGDVPVYATSHVFSASGDVNQYNDMNGVRFCETPWLLETSDPLRQQVTAQWPQAAGSLGRLYAMGVDAYRLAPRLDQLKA
LPDSRIEGQSGSLGMTQSQRVVRQLPWAQFVSGQIQRLPDTPR

Sequences:

>Translated_603_residues
MIACLRLFTALCLAALLAACASSPSSSLGELPRTPDATIEQLLEQAAQAKSPDKAALLRLSAADMAYRQGNAGQSAQILQ
QVPMEQLQPGQQAFASTLSAELAMTRNQPKAALTALSHPSLQRLSELSVPLQVRAGTVHARALEADGQTLAAARERIFIA
PMLEGEAASKNHEAIWTLIASLPADQLQANTTDDLGGWMSLALAVKTAGTLEQQQAAIDNWRNQHPKHPAAINLPLPLTK
LKELASQPLSKIALLLPQDGQLASVGKALRDGFMAAHYQAQQAGQKPPAIEFYDSSKLTNLDEFYRKAQADGVQLVVGPL
EKPLVKQLSTRPQLPITTLALNYSEGDQGPAQLFQFGLAAEDEAREVSRRARADGLHRAAIMVPKGEWGDRVLRAFSQDW
QANGGSIVATERVDQPVQLAQQIADMFQLRQSEARAKSLQNAAGTNVAAQPSRRQDIEFIFLAATPQQAQQIKPTLNFQY
AGDVPVYATSHVFSASGDVNQYNDMNGVRFCETPWLLETSDPLRQQVTAQWPQAAGSLGRLYAMGVDAYRLAPRLDQLKA
LPDSRIEGQSGSLGMTQSQRVVRQLPWAQFVSGQIQRLPDTPR
>Mature_603_residues
MIACLRLFTALCLAALLAACASSPSSSLGELPRTPDATIEQLLEQAAQAKSPDKAALLRLSAADMAYRQGNAGQSAQILQ
QVPMEQLQPGQQAFASTLSAELAMTRNQPKAALTALSHPSLQRLSELSVPLQVRAGTVHARALEADGQTLAAARERIFIA
PMLEGEAASKNHEAIWTLIASLPADQLQANTTDDLGGWMSLALAVKTAGTLEQQQAAIDNWRNQHPKHPAAINLPLPLTK
LKELASQPLSKIALLLPQDGQLASVGKALRDGFMAAHYQAQQAGQKPPAIEFYDSSKLTNLDEFYRKAQADGVQLVVGPL
EKPLVKQLSTRPQLPITTLALNYSEGDQGPAQLFQFGLAAEDEAREVSRRARADGLHRAAIMVPKGEWGDRVLRAFSQDW
QANGGSIVATERVDQPVQLAQQIADMFQLRQSEARAKSLQNAAGTNVAAQPSRRQDIEFIFLAATPQQAQQIKPTLNFQY
AGDVPVYATSHVFSASGDVNQYNDMNGVRFCETPWLLETSDPLRQQVTAQWPQAAGSLGRLYAMGVDAYRLAPRLDQLKA
LPDSRIEGQSGSLGMTQSQRVVRQLPWAQFVSGQIQRLPDTPR

Specific function: Unknown

COG id: COG3107

COG function: function code R; Putative lipoprotein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yraM [H]

Homologues:

Organism=Escherichia coli, GI1789537, Length=320, Percent_Identity=28.75, Blast_Score=129, Evalue=7e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007443 [H]

Pfam domain/function: PF04348 LppC [H]

EC number: NA

Molecular weight: Translated: 65398; Mature: 65398

Theoretical pI: Translated: 7.24; Mature: 7.24

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00041 HTH_ARAC_FAMILY_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIACLRLFTALCLAALLAACASSPSSSLGELPRTPDATIEQLLEQAAQAKSPDKAALLRL
CHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHEEH
SAADMAYRQGNAGQSAQILQQVPMEQLQPGQQAFASTLSAELAMTRNQPKAALTALSHPS
HHHHHHHHCCCCCHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHH
LQRLSELSVPLQVRAGTVHARALEADGQTLAAARERIFIAPMLEGEAASKNHEAIWTLIA
HHHHHHCCCCEEEECCEEEEEEECCCCHHHHHHHHCEEEEEEECCCCCCCCHHHHHHHHH
SLPADQLQANTTDDLGGWMSLALAVKTAGTLEQQQAAIDNWRNQHPKHPAAINLPLPLTK
HCCHHHHCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCEEECCCCHHH
LKELASQPLSKIALLLPQDGQLASVGKALRDGFMAAHYQAQQAGQKPPAIEFYDSSKLTN
HHHHHHCCHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCC
LDEFYRKAQADGVQLVVGPLEKPLVKQLSTRPQLPITTLALNYSEGDQGPAQLFQFGLAA
HHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHCCCC
EDEAREVSRRARADGLHRAAIMVPKGEWGDRVLRAFSQDWQANGGSIVATERVDQPVQLA
CHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEHHHCCCHHHHH
QQIADMFQLRQSEARAKSLQNAAGTNVAAQPSRRQDIEFIFLAATPQQAQQIKPTLNFQY
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCHHHHHHCCCCCCEEE
AGDVPVYATSHVFSASGDVNQYNDMNGVRFCETPWLLETSDPLRQQVTAQWPQAAGSLGR
CCCCCEEEECCEEECCCCCCCCCCCCCCEEECCCCEECCCCHHHHHHHHHHHHHHHHHHH
LYAMGVDAYRLAPRLDQLKALPDSRIEGQSGSLGMTQSQRVVRQLPWAQFVSGQIQRLPD
HHHHCCHHHHHCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCC
TPR
CCC
>Mature Secondary Structure
MIACLRLFTALCLAALLAACASSPSSSLGELPRTPDATIEQLLEQAAQAKSPDKAALLRL
CHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHEEH
SAADMAYRQGNAGQSAQILQQVPMEQLQPGQQAFASTLSAELAMTRNQPKAALTALSHPS
HHHHHHHHCCCCCHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHH
LQRLSELSVPLQVRAGTVHARALEADGQTLAAARERIFIAPMLEGEAASKNHEAIWTLIA
HHHHHHCCCCEEEECCEEEEEEECCCCHHHHHHHHCEEEEEEECCCCCCCCHHHHHHHHH
SLPADQLQANTTDDLGGWMSLALAVKTAGTLEQQQAAIDNWRNQHPKHPAAINLPLPLTK
HCCHHHHCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCEEECCCCHHH
LKELASQPLSKIALLLPQDGQLASVGKALRDGFMAAHYQAQQAGQKPPAIEFYDSSKLTN
HHHHHHCCHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCC
LDEFYRKAQADGVQLVVGPLEKPLVKQLSTRPQLPITTLALNYSEGDQGPAQLFQFGLAA
HHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHCCCC
EDEAREVSRRARADGLHRAAIMVPKGEWGDRVLRAFSQDWQANGGSIVATERVDQPVQLA
CHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEHHHCCCHHHHH
QQIADMFQLRQSEARAKSLQNAAGTNVAAQPSRRQDIEFIFLAATPQQAQQIKPTLNFQY
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCHHHHHHCCCCCCEEE
AGDVPVYATSHVFSASGDVNQYNDMNGVRFCETPWLLETSDPLRQQVTAQWPQAAGSLGR
CCCCCEEEECCEEECCCCCCCCCCCCCCEEECCCCEECCCCHHHHHHHHHHHHHHHHHHH
LYAMGVDAYRLAPRLDQLKALPDSRIEGQSGSLGMTQSQRVVRQLPWAQFVSGQIQRLPD
HHHHCCHHHHHCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCC
TPR
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]