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The map label for this gene is yraN [C]

Identifier: 77460906

GI number: 77460906

Start: 5289841

End: 5290203

Strand: Direct

Name: yraN [C]

Synonym: Pfl01_4685

Alternate gene names: 77460906

Gene position: 5289841-5290203 (Clockwise)

Preceding gene: 77460905

Following gene: 77460907

Centisome position: 82.16

GC content: 57.02

Gene sequence:

>363_bases
ATGCCCGACAGGTCACACCTGCAAAGCGGCAAGGATGCCGAGCGCCAGGCGCTCGAGCATCTGCAACACCAGGGTCTGCG
CCTGCTGGCGCAGAACTGGTTATGCAAACGCGGTGAGCTTGATCTGGTCATGCTTGATGGCGATACAGTAGTATTCGTCG
AAGTCCGTTACCGTAAGAACACTCAATGGGGTGGCGCACTCGACAGCATCGATGGGCGCAAGCGGCAGAAACTGATTTTC
GCCGCACAGTATTTTCTTCAGCGCGAATCGCGTTGGGCCAATTCCCCCTGCCGCTTCGACGTGGTGGCCATCGACAGTCA
CCAGGATCAGCTGAACTGGTTGCAGAATGCGTTCGACAGTTGA

Upstream 100 bases:

>100_bases
GCAGCTTGGGCATGACTCAGTCCCAGCGAGTCGTACGTCAGTTGCCATGGGCACAGTTCGTCAGCGGTCAGATCCAGCGC
CTGCCGGACACTCCACGCTG

Downstream 100 bases:

>100_bases
CCACCTGCCCCGACCCGGACACTTTCACTCAACACTTTTGCTCTTTGCTTTGCGGGCTGCACATTCACGTGCCGGACAGC
CGCGCTAATTAAGGTCACAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 119

Protein sequence:

>120_residues
MPDRSHLQSGKDAERQALEHLQHQGLRLLAQNWLCKRGELDLVMLDGDTVVFVEVRYRKNTQWGGALDSIDGRKRQKLIF
AAQYFLQRESRWANSPCRFDVVAIDSHQDQLNWLQNAFDS

Sequences:

>Translated_120_residues
MPDRSHLQSGKDAERQALEHLQHQGLRLLAQNWLCKRGELDLVMLDGDTVVFVEVRYRKNTQWGGALDSIDGRKRQKLIF
AAQYFLQRESRWANSPCRFDVVAIDSHQDQLNWLQNAFDS
>Mature_119_residues
PDRSHLQSGKDAERQALEHLQHQGLRLLAQNWLCKRGELDLVMLDGDTVVFVEVRYRKNTQWGGALDSIDGRKRQKLIFA
AQYFLQRESRWANSPCRFDVVAIDSHQDQLNWLQNAFDS

Specific function: Unknown

COG id: COG0792

COG function: function code L; Predicted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0102 family

Homologues:

Organism=Escherichia coli, GI1789538, Length=113, Percent_Identity=39.8230088495575, Blast_Score=81, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4685_PSEPF (Q3K732)

Other databases:

- EMBL:   CP000094
- RefSeq:   YP_350413.1
- ProteinModelPortal:   Q3K732
- STRING:   Q3K732
- GeneID:   3714586
- GenomeReviews:   CP000094_GR
- KEGG:   pfo:Pfl01_4685
- eggNOG:   COG0792
- HOGENOM:   HBG710155
- OMA:   QWLKNAF
- ProtClustDB:   PRK12497
- BioCyc:   PFLU205922:PFL_4685-MONOMER
- HAMAP:   MF_00048
- InterPro:   IPR011856
- InterPro:   IPR011335
- InterPro:   IPR003509
- Gene3D:   G3DSA:3.40.1350.10
- TIGRFAMs:   TIGR00252

Pfam domain/function: PF02021 UPF0102; SSF52980 Restrict_endonuc_II-like_core

EC number: NA

Molecular weight: Translated: 13997; Mature: 13866

Theoretical pI: Translated: 7.58; Mature: 7.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDRSHLQSGKDAERQALEHLQHQGLRLLAQNWLCKRGELDLVMLDGDTVVFVEVRYRKN
CCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEEEEECCC
TQWGGALDSIDGRKRQKLIFAAQYFLQRESRWANSPCRFDVVAIDSHQDQLNWLQNAFDS
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHCCC
>Mature Secondary Structure 
PDRSHLQSGKDAERQALEHLQHQGLRLLAQNWLCKRGELDLVMLDGDTVVFVEVRYRKN
CCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEEEEECCC
TQWGGALDSIDGRKRQKLIFAAQYFLQRESRWANSPCRFDVVAIDSHQDQLNWLQNAFDS
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA