| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77460790
Identifier: 77460790
GI number: 77460790
Start: 5162354
End: 5163577
Strand: Reverse
Name: 77460790
Synonym: Pfl01_4569
Alternate gene names: NA
Gene position: 5163577-5162354 (Counterclockwise)
Preceding gene: 77460791
Following gene: 77460789
Centisome position: 80.2
GC content: 56.7
Gene sequence:
>1224_bases ATGAAGAAAACAGCGTGTTGGCTGGGTTTGCTGACAGTGCTGGGCATGTCAGGGGCGCAGGCAGCGAACCAGGAGATCCG GGCGCTGTTCCAGCCCGATCCGTCGCAACCCAATAAAAACGTGTTCATCAACAAGACGCCGAACAGTGGTTATTGCGCCA GTCATCCGGCCCAATGCGCGGACAACAACATGTTCAGTATTCAGGTGCCGATTCGCTTCAGCACCTTCACGCCCATGTTT TCGGGTAACGGCGTGTGGGTAAAAGTGCCGTCCGAATGGCGACAGTTGAACGTGATCAATCATGAAACTCAGCAAACAAG CATCGTTGAAGTCCGTATCAGCGGTATCGGGTCGAAGTTTCAACTGAGTAAACCGGTCACCGAACTGACGGGACAGACCG ATGTGCTTGAGGGGCATCGAAAGTTGTGGACCGGCAATTCCTGGGTATACGCACCGCCGCCATGCGAGTACAGCGGCGTT GGCTATTACAGCCCGACCACTTACCAGTTTTTCTGGAAAACGCCGCAGCCGGGAACCTGCATCAAGACGGCGGCGTTCGA CGTGGGGCACATGTCCTTCGACTACCTCGATATCGCCTATGAGTTGCGCACGCCTGATCCCTTGAGCATGTCGTCCGGGT TGTACACCGGATCGTTGACCTACAGCGTCGGTCGAGGCAGCGCCGATTTCACGATGGGGCCGTTCATGGGGGCGGATGAC GGCAACCTCACGCTGGATTTCGTGCTGGACGTACAGCACACACTGAAGGTGGATCTGCCACCGGGTGGCAACCGGATTAC CTTGCAGCCCGAGGGCGGGTGGCAGCGCTGGTTGAATTCAGGGCGGGCCCCGGAACGCCTGTTCAGTGACCAGACCTTCC ACATCTCGGCCAGCTCCAGATTCAAGATGTACCTGGAGTGCGGCTCCGGAACGGTAACGGCCTGTGGATTATGGAATGAG GGGACCAACTACGGCACACCGATCATCGTCAGTGTGACCCTGCCCAACGGTTTGACCGACACCAGTGGACGGCCAGTCAA GCGACAGGAACTGTTCCCGCAGGAGTCGAGGGCCATCTTTTTTCAACCGGGAATCTATGTCGATCGCAAGCCCGGAACCC TGCATTTCGAAATCGACAAGGCCAACACCGAACGAATACTCAAGGCTGATCGTGGAAACAGGTATTCCAGTACGGTCGTG GTGATTTGGGATTCGGAAATCTGA
Upstream 100 bases:
>100_bases GGGGCGAGTGGAGAACAACGTGCTGATGATTGGTGACCTGCGTTGCAGCCCCGACACCCTGGCCGATGCCACATTCACCG AACAGAAGGCGGGCTGAGCG
Downstream 100 bases:
>100_bases TCGAGTCACTGTACTCAAATCGAGGTTCTGCTGATGAAACAACTCGTTGCTCTGCTGGTGGCAGGTTTGCTTTTTCAAAG TGCGTACGCCGGTCCGAACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 407; Mature: 407
Protein sequence:
>407_residues MKKTACWLGLLTVLGMSGAQAANQEIRALFQPDPSQPNKNVFINKTPNSGYCASHPAQCADNNMFSIQVPIRFSTFTPMF SGNGVWVKVPSEWRQLNVINHETQQTSIVEVRISGIGSKFQLSKPVTELTGQTDVLEGHRKLWTGNSWVYAPPPCEYSGV GYYSPTTYQFFWKTPQPGTCIKTAAFDVGHMSFDYLDIAYELRTPDPLSMSSGLYTGSLTYSVGRGSADFTMGPFMGADD GNLTLDFVLDVQHTLKVDLPPGGNRITLQPEGGWQRWLNSGRAPERLFSDQTFHISASSRFKMYLECGSGTVTACGLWNE GTNYGTPIIVSVTLPNGLTDTSGRPVKRQELFPQESRAIFFQPGIYVDRKPGTLHFEIDKANTERILKADRGNRYSSTVV VIWDSEI
Sequences:
>Translated_407_residues MKKTACWLGLLTVLGMSGAQAANQEIRALFQPDPSQPNKNVFINKTPNSGYCASHPAQCADNNMFSIQVPIRFSTFTPMF SGNGVWVKVPSEWRQLNVINHETQQTSIVEVRISGIGSKFQLSKPVTELTGQTDVLEGHRKLWTGNSWVYAPPPCEYSGV GYYSPTTYQFFWKTPQPGTCIKTAAFDVGHMSFDYLDIAYELRTPDPLSMSSGLYTGSLTYSVGRGSADFTMGPFMGADD GNLTLDFVLDVQHTLKVDLPPGGNRITLQPEGGWQRWLNSGRAPERLFSDQTFHISASSRFKMYLECGSGTVTACGLWNE GTNYGTPIIVSVTLPNGLTDTSGRPVKRQELFPQESRAIFFQPGIYVDRKPGTLHFEIDKANTERILKADRGNRYSSTVV VIWDSEI >Mature_407_residues MKKTACWLGLLTVLGMSGAQAANQEIRALFQPDPSQPNKNVFINKTPNSGYCASHPAQCADNNMFSIQVPIRFSTFTPMF SGNGVWVKVPSEWRQLNVINHETQQTSIVEVRISGIGSKFQLSKPVTELTGQTDVLEGHRKLWTGNSWVYAPPPCEYSGV GYYSPTTYQFFWKTPQPGTCIKTAAFDVGHMSFDYLDIAYELRTPDPLSMSSGLYTGSLTYSVGRGSADFTMGPFMGADD GNLTLDFVLDVQHTLKVDLPPGGNRITLQPEGGWQRWLNSGRAPERLFSDQTFHISASSRFKMYLECGSGTVTACGLWNE GTNYGTPIIVSVTLPNGLTDTSGRPVKRQELFPQESRAIFFQPGIYVDRKPGTLHFEIDKANTERILKADRGNRYSSTVV VIWDSEI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45134; Mature: 45134
Theoretical pI: Translated: 7.14; Mature: 7.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTACWLGLLTVLGMSGAQAANQEIRALFQPDPSQPNKNVFINKTPNSGYCASHPAQCA CCCHHHHHHHHHHHCCCCCHHHCHHHHEEECCCCCCCCCCEEEEECCCCCCCCCCCCHHC DNNMFSIQVPIRFSTFTPMFSGNGVWVKVPSEWRQLNVINHETQQTSIVEVRISGIGSKF CCCEEEEEEEEEEEEECCEECCCEEEEECCCCCEEEEEECCCCCCEEEEEEEEECCCCEE QLSKPVTELTGQTDVLEGHRKLWTGNSWVYAPPPCEYSGVGYYSPTTYQFFWKTPQPGTC EECCCHHHHCCCHHHHCCCCEEECCCCEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCE IKTAAFDVGHMSFDYLDIAYELRTPDPLSMSSGLYTGSLTYSVGRGSADFTMGPFMGADD EEEEEEECCCCEEEEEEEEEEECCCCCCCCCCCEEEEEEEEEECCCCCCCEECCCCCCCC GNLTLDFVLDVQHTLKVDLPPGGNRITLQPEGGWQRWLNSGRAPERLFSDQTFHISASSR CCEEEEEEEEEEEEEEEECCCCCCEEEEECCCCHHHHHHCCCCHHHHHCCCEEEEECCCC FKMYLECGSGTVTACGLWNEGTNYGTPIIVSVTLPNGLTDTSGRPVKRQELFPQESRAIF EEEEEEECCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHCCCCCCCEEE FQPGIYVDRKPGTLHFEIDKANTERILKADRGNRYSSTVVVIWDSEI ECCCEEEECCCCEEEEEEECCCCCCCEECCCCCCCCCEEEEEECCCC >Mature Secondary Structure MKKTACWLGLLTVLGMSGAQAANQEIRALFQPDPSQPNKNVFINKTPNSGYCASHPAQCA CCCHHHHHHHHHHHCCCCCHHHCHHHHEEECCCCCCCCCCEEEEECCCCCCCCCCCCHHC DNNMFSIQVPIRFSTFTPMFSGNGVWVKVPSEWRQLNVINHETQQTSIVEVRISGIGSKF CCCEEEEEEEEEEEEECCEECCCEEEEECCCCCEEEEEECCCCCCEEEEEEEEECCCCEE QLSKPVTELTGQTDVLEGHRKLWTGNSWVYAPPPCEYSGVGYYSPTTYQFFWKTPQPGTC EECCCHHHHCCCHHHHCCCCEEECCCCEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCE IKTAAFDVGHMSFDYLDIAYELRTPDPLSMSSGLYTGSLTYSVGRGSADFTMGPFMGADD EEEEEEECCCCEEEEEEEEEEECCCCCCCCCCCEEEEEEEEEECCCCCCCEECCCCCCCC GNLTLDFVLDVQHTLKVDLPPGGNRITLQPEGGWQRWLNSGRAPERLFSDQTFHISASSR CCEEEEEEEEEEEEEEEECCCCCCEEEEECCCCHHHHHHCCCCHHHHHCCCEEEEECCCC FKMYLECGSGTVTACGLWNEGTNYGTPIIVSVTLPNGLTDTSGRPVKRQELFPQESRAIF EEEEEEECCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHCCCCCCCEEE FQPGIYVDRKPGTLHFEIDKANTERILKADRGNRYSSTVVVIWDSEI ECCCEEEECCCCEEEEEEECCCCCCCEECCCCCCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA