Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

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The map label for this gene is yagY [C]

Identifier: 77460789

GI number: 77460789

Start: 5161580

End: 5162320

Strand: Reverse

Name: yagY [C]

Synonym: Pfl01_4568

Alternate gene names: 77460789

Gene position: 5162320-5161580 (Counterclockwise)

Preceding gene: 77460790

Following gene: 77460788

Centisome position: 80.18

GC content: 55.74

Gene sequence:

>741_bases
ATGAAACAACTCGTTGCTCTGCTGGTGGCAGGTTTGCTTTTTCAAAGTGCGTACGCCGGTCCGAACATCAATATCGGCGT
CGTCTACGACTATCTGGCCGGTGATAAAAGCACGTATCTGAAACGTGTCTACAACAGCGGTGACAGCACGGCATTCGTCA
AGATCAATGTGCTGGAAATCATTTACAACGTCGATGGCACATCCTCCGAAGTGCCCGTGAAAGTCCAGGCCGATGCCAGT
GCGCGGGACGGTCTGATGGCCAGCCCGGCCCGCTTGATCATTCCGGCCCAGGGCATGCAGGGCACCCGGTTACTGTTTAT
GGGCGAGCGGGACAAGGAGCGTTATTTCCGGGTGCGGTTCGTGCCGGTGGTGCCGGAAAAGGAAGACGAATTCGCGGTTT
CTCAGGAAGAGCGCGAGGACTACAAAAAGACGCTGACGGCGGGCGTGAACGTCATGGCCGGCTTCGGCACCATTTTCTTC
GTGCGTCCGGCCAATACGCGTTTCGACAGCGTGATCGAAGACAGTGCCGGTGCTTACAAGGTGCGTAACAACGGCAATAC
GGTGGTGGTGATCGACGAGTTCAAGAGCTGTTCGAAAACCGATGAAACCGACTGCGAGCCAACTACCAAGCACCATGTCA
TGGCCGGCAAATCATTCGAATTCGAAAAGAAGCCGGGACGTGAGTACCGCTTCAACCTGGTCGAAGGTGAGGCGAAGAAA
AACCTGCGTGTCACCGGCTGA

Upstream 100 bases:

>100_bases
ACTCAAGGCTGATCGTGGAAACAGGTATTCCAGTACGGTCGTGGTGATTTGGGATTCGGAAATCTGATCGAGTCACTGTA
CTCAAATCGAGGTTCTGCTG

Downstream 100 bases:

>100_bases
CAGCGCCCGAAGGCACAGGCAATTGCTCTTCATTCATGCAAGTAACGGGTATCGGAAAAATGATCAGACAATGGATCGCT
CTGACCTCAGCCAGCGGGTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MKQLVALLVAGLLFQSAYAGPNINIGVVYDYLAGDKSTYLKRVYNSGDSTAFVKINVLEIIYNVDGTSSEVPVKVQADAS
ARDGLMASPARLIIPAQGMQGTRLLFMGERDKERYFRVRFVPVVPEKEDEFAVSQEEREDYKKTLTAGVNVMAGFGTIFF
VRPANTRFDSVIEDSAGAYKVRNNGNTVVVIDEFKSCSKTDETDCEPTTKHHVMAGKSFEFEKKPGREYRFNLVEGEAKK
NLRVTG

Sequences:

>Translated_246_residues
MKQLVALLVAGLLFQSAYAGPNINIGVVYDYLAGDKSTYLKRVYNSGDSTAFVKINVLEIIYNVDGTSSEVPVKVQADAS
ARDGLMASPARLIIPAQGMQGTRLLFMGERDKERYFRVRFVPVVPEKEDEFAVSQEEREDYKKTLTAGVNVMAGFGTIFF
VRPANTRFDSVIEDSAGAYKVRNNGNTVVVIDEFKSCSKTDETDCEPTTKHHVMAGKSFEFEKKPGREYRFNLVEGEAKK
NLRVTG
>Mature_246_residues
MKQLVALLVAGLLFQSAYAGPNINIGVVYDYLAGDKSTYLKRVYNSGDSTAFVKINVLEIIYNVDGTSSEVPVKVQADAS
ARDGLMASPARLIIPAQGMQGTRLLFMGERDKERYFRVRFVPVVPEKEDEFAVSQEEREDYKKTLTAGVNVMAGFGTIFF
VRPANTRFDSVIEDSAGAYKVRNNGNTVVVIDEFKSCSKTDETDCEPTTKHHVMAGKSFEFEKKPGREYRFNLVEGEAKK
NLRVTG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27350; Mature: 27350

Theoretical pI: Translated: 7.41; Mature: 7.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQLVALLVAGLLFQSAYAGPNINIGVVYDYLAGDKSTYLKRVYNSGDSTAFVKINVLEI
CHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCHHHHHHHHHCCCCCEEEEEEEEEEE
IYNVDGTSSEVPVKVQADASARDGLMASPARLIIPAQGMQGTRLLFMGERDKERYFRVRF
EEECCCCCCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCCCCCEEEEEE
VPVVPEKEDEFAVSQEEREDYKKTLTAGVNVMAGFGTIFFVRPANTRFDSVIEDSAGAYK
EECCCCCCCCCCCCHHHHHHHHHHHHHCCEEEECCCEEEEEECCCCCHHHHHHCCCCEEE
VRNNGNTVVVIDEFKSCSKTDETDCEPTTKHHVMAGKSFEFEKKPGREYRFNLVEGEAKK
EECCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEECCCCC
NLRVTG
CEEECC
>Mature Secondary Structure
MKQLVALLVAGLLFQSAYAGPNINIGVVYDYLAGDKSTYLKRVYNSGDSTAFVKINVLEI
CHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCHHHHHHHHHCCCCCEEEEEEEEEEE
IYNVDGTSSEVPVKVQADASARDGLMASPARLIIPAQGMQGTRLLFMGERDKERYFRVRF
EEECCCCCCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCCCCCEEEEEE
VPVVPEKEDEFAVSQEEREDYKKTLTAGVNVMAGFGTIFFVRPANTRFDSVIEDSAGAYK
EECCCCCCCCCCCCHHHHHHHHHHHHHCCEEEECCCEEEEEECCCCCHHHHHHCCCCEEE
VRNNGNTVVVIDEFKSCSKTDETDCEPTTKHHVMAGKSFEFEKKPGREYRFNLVEGEAKK
EECCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEECCCCC
NLRVTG
CEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA