Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

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The map label for this gene is yagX [H]

Identifier: 77460791

GI number: 77460791

Start: 5163581

End: 5166151

Strand: Reverse

Name: yagX [H]

Synonym: Pfl01_4570

Alternate gene names: 77460791

Gene position: 5166151-5163581 (Counterclockwise)

Preceding gene: 77460792

Following gene: 77460790

Centisome position: 80.24

GC content: 61.45

Gene sequence:

>2571_bases
ATGTCTGTCAGCCGGACTTTTTTCCGTTCGCAATCAGAGTCCGTGTTCATGTTCCCGATGACCCCCGTCGCGGCTGCGCT
TGCGCTGTTGTTGTGTGCTGGCGCAGTAGTGGCTTCCGAACCTGCCGGTACGACGCCGCGTAGTTTGCTCGCGCAAGCCA
AAGGCTTGCCGAAAGACTTCGAGGAGCACTTTTTTGATGTCCCTCTGGCTGTTCGGGTCGAACTCGACCATCAGCCGTTG
GGCGAAGCGATGATTGTGCTGTCTCGTGATGACCGCCTCACCCTGCTCGAATTCACCGACACCAGCGAGAACCGTTTCGG
CGCTGTCGAACGGGAAAAGTGGGCGAGCTATCTCAAGCCCGGCGTGGCGCTGGGATCATGCGCCGGTCAATGCCCCGAGC
AAATGCTGGCGGTGCATTACAACCTGGAAAACTCCCTCGTCTCCATCCTGACCGAGAATGCCGAACGCGACGTCGAAGCC
AAGCGTTTCTACGACCAGCCGGAAAATGGCAGCACCGGTCTGATCGTGCGTAACCAGCTCAACCTCAACGGCGGCCAGGA
GCAGGATCTGGGTGGGCGTTTCGGCCTGGAGGCCAACGGCAGCCTGGGCAACTGGAGCCAGACGTTCAACATGCAGCTGG
CCCGTCTCGGTGGTCCGGACGACAAGCTCTATCACGCCGTCTACGAGCTGCATACCCAGCGCGAGCTGCAAGGCAGTTTT
CTGCGACTGGGCTATTTCACCCCCACGTCGGAAGGCTTGACCCGTCAGCTGCGCTCATTCGGCACCAGCCCCGATACCAC
CGTGGGCTTGATGTACGGCAGTTCCGACAGCCTGGCGATCGACCTGCAAAACCCGAGCGTCTACCCGATCTATGTCACCG
CCAACCGTCAGGCCTCGGTGGAAATCTACCGCGACGGTCTGCTCATCAACACCCAGTCGGTGCCCGCCGGTTTGCAGACC
CTCGATACCCGGCCCTTGCCCGGCGGGATTTATGAAGTGGAAGTGCGCCTGATCGAGGACGGTCAGACGACATCGAGCAC
CCAGGAGCTGGTCTACAAGCCGAGCAACTGGCGTAACCCCGACGAGCGCTGGCGCTACAACCTGTTTGCCGGTCAGGAAA
CCAAACTGCTCAGCAACTGGGACAAGCAGGCCAGTGGCGACGCCACCGCAGGGGCTTCGCTCAACTATTTGCTGCACCCG
CGGGTCGTCCTCGGGCTGTCGGCGCGTCAGGTTCGGGAAAAGCTGCAATACGGCACCTCCATCGACTGGACCCTGGCCAA
CAGCACCAGTCTGTACGCCAACTTCTACCAGACCGAAGACCATGGCACCGGCATCGATCTGCAGGGCCTCTACAACTATG
GCGCCGGCAGTCTGGTGATCAGTCACAACCGCAGCTGGCTGGACACCACCAATATTTACGACACGCTGCCGGACGGCACG
CGCATCCGTCAGCGCAACGTGTTCACCGGGCAGACCAGCAATTCCTCTCTGGCCCTGAACCATCGCGTCAGCCGCAACAG
TTCGCTAAATGCCCGGGTTGCCCACAGTGAAGGTAACGTCGAAGGCATTGGCGTCGACCTGGGCTGGACCCAGCGCACGA
CGGTGTTTGGCAGTGATTCGAACTGGCGGCTGTCGGTGTTCGACCGGCCGGGCAGTTACAGCAGTGGCGATGCGCGCAAC
CGGGGTATTGATCTGAGCCTGAACGTGGCGCTCGGCGGACCGGGGCAGCAGATTTCCGGCAGCATCGGCACGCGCACCGC
ACGGGACGGCAGCCGGGACAACAACGCTTCGCTGGGTTACCGCAAAACCCTTGAGGATCACGTGCTGCAAAGCGTGGCGG
CGACCATGATCACCGACACCTACGGAATCGGCTTGAACGGTCAGGCTTATTTCAGCACCGACACGGTCAACGGCGATGGT
TTCGTCCAGCGCTCGTCCTATAACGGCAATTACACCGGTGGCCTGAACCTCGACAGCACTGTGGCCATCGGTAGGCAGCA
GATCGTGATGACCAGCCAGCACCAGGGGCGCGGAGCGGGAATGATCGTGGATGTCGAGTCCGATATCGACGGCATCGCTT
TGCGCGCCGACGACTTGAGTGGTGGCAGCGCATCCCTGCGGCCGGGACGCAACTTCATTCCCCTTACGGCCTACAAGAAC
AGCTCGGTCAGCTTCGACTTCGAAGGCAACGACGTGCCGGCAGCGTCCATCGAACCGCCGCGCGCCCGTTATCACTTGAA
CAAGGGCGGCGTGGAGTATCGCAAGGTGAAAGTGATGAAAACCCTGACCGTGCTCGGCCGTCTGCTCGACCCCCAGGGGC
GACCGCTCAAGGGGCACCACGTCATCAATCACGCCAGCCGCGGGGTGAGCGAAGTGGACGGGTTCTTCTCCATGGAAATG
AACGAGGGTTCTCCGACGCTGGAGGTTCGCTACGCGGACCAGTTGCTGTGCCAGTTCCGCCTCGATCCGCAACAGGGGCG
AGTGGAGAACAACGTGCTGATGATTGGTGACCTGCGTTGCAGCCCCGACACCCTGGCCGATGCCACATTCACCGAACAGA
AGGCGGGCTGA

Upstream 100 bases:

>100_bases
GCGATTACACCGGCGCAGTCACCATGATGTTCGACGCTGTTCCTCCCGTCGGCGCCGCGCTCTAACCCGTGAAGTAACAA
AAGCCGGCTGGCTGACGCGA

Downstream 100 bases:

>100_bases
GCGATGAAGAAAACAGCGTGTTGGCTGGGTTTGCTGACAGTGCTGGGCATGTCAGGGGCGCAGGCAGCGAACCAGGAGAT
CCGGGCGCTGTTCCAGCCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 856; Mature: 855

Protein sequence:

>856_residues
MSVSRTFFRSQSESVFMFPMTPVAAALALLLCAGAVVASEPAGTTPRSLLAQAKGLPKDFEEHFFDVPLAVRVELDHQPL
GEAMIVLSRDDRLTLLEFTDTSENRFGAVEREKWASYLKPGVALGSCAGQCPEQMLAVHYNLENSLVSILTENAERDVEA
KRFYDQPENGSTGLIVRNQLNLNGGQEQDLGGRFGLEANGSLGNWSQTFNMQLARLGGPDDKLYHAVYELHTQRELQGSF
LRLGYFTPTSEGLTRQLRSFGTSPDTTVGLMYGSSDSLAIDLQNPSVYPIYVTANRQASVEIYRDGLLINTQSVPAGLQT
LDTRPLPGGIYEVEVRLIEDGQTTSSTQELVYKPSNWRNPDERWRYNLFAGQETKLLSNWDKQASGDATAGASLNYLLHP
RVVLGLSARQVREKLQYGTSIDWTLANSTSLYANFYQTEDHGTGIDLQGLYNYGAGSLVISHNRSWLDTTNIYDTLPDGT
RIRQRNVFTGQTSNSSLALNHRVSRNSSLNARVAHSEGNVEGIGVDLGWTQRTTVFGSDSNWRLSVFDRPGSYSSGDARN
RGIDLSLNVALGGPGQQISGSIGTRTARDGSRDNNASLGYRKTLEDHVLQSVAATMITDTYGIGLNGQAYFSTDTVNGDG
FVQRSSYNGNYTGGLNLDSTVAIGRQQIVMTSQHQGRGAGMIVDVESDIDGIALRADDLSGGSASLRPGRNFIPLTAYKN
SSVSFDFEGNDVPAASIEPPRARYHLNKGGVEYRKVKVMKTLTVLGRLLDPQGRPLKGHHVINHASRGVSEVDGFFSMEM
NEGSPTLEVRYADQLLCQFRLDPQQGRVENNVLMIGDLRCSPDTLADATFTEQKAG

Sequences:

>Translated_856_residues
MSVSRTFFRSQSESVFMFPMTPVAAALALLLCAGAVVASEPAGTTPRSLLAQAKGLPKDFEEHFFDVPLAVRVELDHQPL
GEAMIVLSRDDRLTLLEFTDTSENRFGAVEREKWASYLKPGVALGSCAGQCPEQMLAVHYNLENSLVSILTENAERDVEA
KRFYDQPENGSTGLIVRNQLNLNGGQEQDLGGRFGLEANGSLGNWSQTFNMQLARLGGPDDKLYHAVYELHTQRELQGSF
LRLGYFTPTSEGLTRQLRSFGTSPDTTVGLMYGSSDSLAIDLQNPSVYPIYVTANRQASVEIYRDGLLINTQSVPAGLQT
LDTRPLPGGIYEVEVRLIEDGQTTSSTQELVYKPSNWRNPDERWRYNLFAGQETKLLSNWDKQASGDATAGASLNYLLHP
RVVLGLSARQVREKLQYGTSIDWTLANSTSLYANFYQTEDHGTGIDLQGLYNYGAGSLVISHNRSWLDTTNIYDTLPDGT
RIRQRNVFTGQTSNSSLALNHRVSRNSSLNARVAHSEGNVEGIGVDLGWTQRTTVFGSDSNWRLSVFDRPGSYSSGDARN
RGIDLSLNVALGGPGQQISGSIGTRTARDGSRDNNASLGYRKTLEDHVLQSVAATMITDTYGIGLNGQAYFSTDTVNGDG
FVQRSSYNGNYTGGLNLDSTVAIGRQQIVMTSQHQGRGAGMIVDVESDIDGIALRADDLSGGSASLRPGRNFIPLTAYKN
SSVSFDFEGNDVPAASIEPPRARYHLNKGGVEYRKVKVMKTLTVLGRLLDPQGRPLKGHHVINHASRGVSEVDGFFSMEM
NEGSPTLEVRYADQLLCQFRLDPQQGRVENNVLMIGDLRCSPDTLADATFTEQKAG
>Mature_855_residues
SVSRTFFRSQSESVFMFPMTPVAAALALLLCAGAVVASEPAGTTPRSLLAQAKGLPKDFEEHFFDVPLAVRVELDHQPLG
EAMIVLSRDDRLTLLEFTDTSENRFGAVEREKWASYLKPGVALGSCAGQCPEQMLAVHYNLENSLVSILTENAERDVEAK
RFYDQPENGSTGLIVRNQLNLNGGQEQDLGGRFGLEANGSLGNWSQTFNMQLARLGGPDDKLYHAVYELHTQRELQGSFL
RLGYFTPTSEGLTRQLRSFGTSPDTTVGLMYGSSDSLAIDLQNPSVYPIYVTANRQASVEIYRDGLLINTQSVPAGLQTL
DTRPLPGGIYEVEVRLIEDGQTTSSTQELVYKPSNWRNPDERWRYNLFAGQETKLLSNWDKQASGDATAGASLNYLLHPR
VVLGLSARQVREKLQYGTSIDWTLANSTSLYANFYQTEDHGTGIDLQGLYNYGAGSLVISHNRSWLDTTNIYDTLPDGTR
IRQRNVFTGQTSNSSLALNHRVSRNSSLNARVAHSEGNVEGIGVDLGWTQRTTVFGSDSNWRLSVFDRPGSYSSGDARNR
GIDLSLNVALGGPGQQISGSIGTRTARDGSRDNNASLGYRKTLEDHVLQSVAATMITDTYGIGLNGQAYFSTDTVNGDGF
VQRSSYNGNYTGGLNLDSTVAIGRQQIVMTSQHQGRGAGMIVDVESDIDGIALRADDLSGGSASLRPGRNFIPLTAYKNS
SVSFDFEGNDVPAASIEPPRARYHLNKGGVEYRKVKVMKTLTVLGRLLDPQGRPLKGHHVINHASRGVSEVDGFFSMEMN
EGSPTLEVRYADQLLCQFRLDPQQGRVENNVLMIGDLRCSPDTLADATFTEQKAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli plasmid NTP513 CFA fimbria subunit C (CfaC) [H]

Homologues:

Organism=Escherichia coli, GI1786484, Length=253, Percent_Identity=25.6916996047431, Blast_Score=68, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008969
- InterPro:   IPR014766 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 93649; Mature: 93518

Theoretical pI: Translated: 5.45; Mature: 5.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVSRTFFRSQSESVFMFPMTPVAAALALLLCAGAVVASEPAGTTPRSLLAQAKGLPKDF
CCCCCCHHHCCCCCEEEEECHHHHHHHHHHHHHCHHEECCCCCCCHHHHHHHHCCCCHHH
EEHFFDVPLAVRVELDHQPLGEAMIVLSRDDRLTLLEFTDTSENRFGAVEREKWASYLKP
HHHHHCCCEEEEEEECCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCCHHHHHHHHHCC
GVALGSCAGQCPEQMLAVHYNLENSLVSILTENAERDVEAKRFYDQPENGSTGLIVRNQL
CCEEHHHHCCCCHHEEEEEECCHHHHHHHHHHCCCCCCHHHHHCCCCCCCCEEEEEEEEE
NLNGGQEQDLGGRFGLEANGSLGNWSQTFNMQLARLGGPDDKLYHAVYELHTQRELQGSF
CCCCCCCCCCCCEECEECCCCCCCCCCEECEEEEECCCCCHHHHHHHHHHHHHHHHCCCE
LRLGYFTPTSEGLTRQLRSFGTSPDTTVGLMYGSSDSLAIDLQNPSVYPIYVTANRQASV
EEEEECCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEECCCCEEEEEEECCCCEEE
EIYRDGLLINTQSVPAGLQTLDTRPLPGGIYEVEVRLIEDGQTTSSTQELVYKPSNWRNP
EEEECCEEEECCCCCCCHHHCCCCCCCCCEEEEEEEEEECCCCCCCCHHEEECCCCCCCC
DERWRYNLFAGQETKLLSNWDKQASGDATAGASLNYLLHPRVVLGLSARQVREKLQYGTS
HHHEEEEEECCCCHHHHHCCCCCCCCCCCCCCEEEEEECCEEEECCCHHHHHHHHHCCCC
IDWTLANSTSLYANFYQTEDHGTGIDLQGLYNYGAGSLVISHNRSWLDTTNIYDTLPDGT
EEEEEECCCEEEEEEEEECCCCCCEEEHHHCCCCCCEEEEECCCCCCCCCCCHHCCCCCC
RIRQRNVFTGQTSNSSLALNHRVSRNSSLNARVAHSEGNVEGIGVDLGWTQRTTVFGSDS
EEEECCEEECCCCCCEEEEEEEECCCCCCCEEEEECCCCEEEEEEECCCCEEEEEEECCC
NWRLSVFDRPGSYSSGDARNRGIDLSLNVALGGPGQQISGSIGTRTARDGSRDNNASLGY
CEEEEEEECCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCH
RKTLEDHVLQSVAATMITDTYGIGLNGQAYFSTDTVNGDGFVQRSSYNGNYTGGLNLDST
HHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECEECCCCEEEECCCCCCEECCCCCCCE
VAIGRQQIVMTSQHQGRGAGMIVDVESDIDGIALRADDLSGGSASLRPGRNFIPLTAYKN
EECCCEEEEEECCCCCCCCEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEECC
SSVSFDFEGNDVPAASIEPPRARYHLNKGGVEYRKVKVMKTLTVLGRLLDPQGRPLKGHH
CCEEEEECCCCCCCCCCCCCHHEEEECCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCH
VINHASRGVSEVDGFFSMEMNEGSPTLEVRYADQLLCQFRLDPQQGRVENNVLMIGDLRC
HHHHHHCCHHHHCCEEEEEECCCCCEEEEEEHHHHHEEEECCCCCCCCCCCEEEEEECCC
SPDTLADATFTEQKAG
CCCHHCCCCCCCCCCC
>Mature Secondary Structure 
SVSRTFFRSQSESVFMFPMTPVAAALALLLCAGAVVASEPAGTTPRSLLAQAKGLPKDF
CCCCCHHHCCCCCEEEEECHHHHHHHHHHHHHCHHEECCCCCCCHHHHHHHHCCCCHHH
EEHFFDVPLAVRVELDHQPLGEAMIVLSRDDRLTLLEFTDTSENRFGAVEREKWASYLKP
HHHHHCCCEEEEEEECCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCCHHHHHHHHHCC
GVALGSCAGQCPEQMLAVHYNLENSLVSILTENAERDVEAKRFYDQPENGSTGLIVRNQL
CCEEHHHHCCCCHHEEEEEECCHHHHHHHHHHCCCCCCHHHHHCCCCCCCCEEEEEEEEE
NLNGGQEQDLGGRFGLEANGSLGNWSQTFNMQLARLGGPDDKLYHAVYELHTQRELQGSF
CCCCCCCCCCCCEECEECCCCCCCCCCEECEEEEECCCCCHHHHHHHHHHHHHHHHCCCE
LRLGYFTPTSEGLTRQLRSFGTSPDTTVGLMYGSSDSLAIDLQNPSVYPIYVTANRQASV
EEEEECCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEECCCCEEEEEEECCCCEEE
EIYRDGLLINTQSVPAGLQTLDTRPLPGGIYEVEVRLIEDGQTTSSTQELVYKPSNWRNP
EEEECCEEEECCCCCCCHHHCCCCCCCCCEEEEEEEEEECCCCCCCCHHEEECCCCCCCC
DERWRYNLFAGQETKLLSNWDKQASGDATAGASLNYLLHPRVVLGLSARQVREKLQYGTS
HHHEEEEEECCCCHHHHHCCCCCCCCCCCCCCEEEEEECCEEEECCCHHHHHHHHHCCCC
IDWTLANSTSLYANFYQTEDHGTGIDLQGLYNYGAGSLVISHNRSWLDTTNIYDTLPDGT
EEEEEECCCEEEEEEEEECCCCCCEEEHHHCCCCCCEEEEECCCCCCCCCCCHHCCCCCC
RIRQRNVFTGQTSNSSLALNHRVSRNSSLNARVAHSEGNVEGIGVDLGWTQRTTVFGSDS
EEEECCEEECCCCCCEEEEEEEECCCCCCCEEEEECCCCEEEEEEECCCCEEEEEEECCC
NWRLSVFDRPGSYSSGDARNRGIDLSLNVALGGPGQQISGSIGTRTARDGSRDNNASLGY
CEEEEEEECCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCH
RKTLEDHVLQSVAATMITDTYGIGLNGQAYFSTDTVNGDGFVQRSSYNGNYTGGLNLDST
HHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECEECCCCEEEECCCCCCEECCCCCCCE
VAIGRQQIVMTSQHQGRGAGMIVDVESDIDGIALRADDLSGGSASLRPGRNFIPLTAYKN
EECCCEEEEEECCCCCCCCEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEECC
SSVSFDFEGNDVPAASIEPPRARYHLNKGGVEYRKVKVMKTLTVLGRLLDPQGRPLKGHH
CCEEEEECCCCCCCCCCCCCHHEEEECCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCH
VINHASRGVSEVDGFFSMEMNEGSPTLEVRYADQLLCQFRLDPQQGRVENNVLMIGDLRC
HHHHHHCCHHHHCCEEEEEECCCCCEEEEEEHHHHHEEEECCCCCCCCCCCEEEEEECCC
SPDTLADATFTEQKAG
CCCHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]