Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

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The map label for this gene is 77460781

Identifier: 77460781

GI number: 77460781

Start: 5144427

End: 5145932

Strand: Reverse

Name: 77460781

Synonym: Pfl01_4560

Alternate gene names: NA

Gene position: 5145932-5144427 (Counterclockwise)

Preceding gene: 77460782

Following gene: 77460778

Centisome position: 79.93

GC content: 59.1

Gene sequence:

>1506_bases
ATGAGGATCAGCGATTTTCTCGTACGAGAACTCGGCCGCCGTCAGGTCGTGCTGTTCTTCCTGCTTGCCACAATGCTGTA
CATCCTGCCGCTGATCCTCGCTGACTTCCCCTACATCGATGACAACTGGCGCACGCTGGCAGCCGGCAACGCCTGGGCCG
GGCAGGGGCGGTTGTTCATGGACTGGCTGTATCAGGCGCTGACCTTTACCGGCGCTGCACCGAACATTTTTCCATTACCG
CTGTTGCTCGCCACCGTAGCGATGTCGTTCGCTCTGACCCGGCTGACCTTCCACTATTTTCCCGAACCGACGGTGGCCTG
TTGCCTGGTGCCCTTGCCGCTCTGGTACAACCCGTTCCTGTTGCAGAACCTGTCCTATCAATACGACGGGGCCGGCATGG
CACTGAGTCTGGTCGCGGTGATTTACGCGATCACTTTTTGCGGCGCTTCACGCATTCAGCGATGGCTGGTGCCGTCGGCG
TTGCTGGCGCTGGCGATCGGGCTGTATCAGATCAGTCTCAATGTGTTTCTCGGTCTGTGCTGCCTGGAATTGCTGCGCAA
TGTCCATCGGCGAGTACCGTGGTCGGAGCTCTGGCACCAGTCAGGCTGGCGGCTGGCGCAACTGCTGCTGGCAGTGTTGA
TTTACAGCGTCACGGCCTATCCGTTCACTGACCACGGACGCACGCAATTGCTGAAGGCAAGCGCTGATCCGTTGCTGCAG
ATCGGCATCAATATCGCTCGGGTGATGGAGAAGGTAGCGCTGCTGTTTCACGGCGGTTACACGGCGGTTTTTATTGCGCT
GGTGCTGTGTGCTGTGATCGGCGCCGTGCAGTTGGGGCGGCAGATTCGCGAGCGCCACCTGTCGCGCGCCAAGGGCTTGC
TGCTGAGCTTCAGCTGCCTGCTGGCAATGCCGCTGATTGTGCTGCTGGTGCCGGGCATGACGCTGCTGTTTCGCGACTTC
AATGAAGGCGCGCGCACCCTGATGGGGTTCGGCGTGCTGCTGATGTTGCTGTTCTATCTGGCCTATGTCGGATTGACGTC
GCTGCACTCGCGATTGCCCCTGTTGTTGGCAATTCCGCTTCTGGCAACCTTGTCGCTGTCCTTCGCTTACGGGCGGGTGC
TGATGATGGAAAAAACCTTTGCCAATAGCGCCCTGTTCAGCCTCAGTCAGGACATTTCCTCTCATCGCGAACTGCGCGAA
GCCAAACGTATTTACCTGTCGGTCACTTACTCCGACCGTTGGCTGGCGGGTGCGGAGGGCACCTTCAAACAGCTACCGGT
GCTGCGCTATCTGTTGAACATCGACTACTTCATGCTCGCCGAAAACCTGCCGTCGGCCGGCATCACCAACGTGGTTGCAG
AGCGCGAACGGCGCAATGCCACCCGCGTCGGCTATCAGGGGTTTCCAGCCTTGGTGGATCGCCTCTATTACCGCATCTAT
CTGACCGGCGATTACGGTTTCATCGTCATGAAAGAGCCGCCCCATGGTCGGCTCTTGAGTTGGTGA

Upstream 100 bases:

>100_bases
CGCTGGTCTGAAATCAGCGCAAAAAACGACTTCTGATTCAGAGTCATGTTCGAAGGTTTATCTACTTCGTTTCCAGCGCA
GCCGTGAACAGAGGCGCAGT

Downstream 100 bases:

>100_bases
GTATCCGAGGTGCTATGCCCTGAGCGTTACTGCTAGGCGGCCGCGATCTCCTGCGGCTCAAAACTGTCCGCCCTAGCCAT
CTGCCACATCCGCGAATAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 501; Mature: 501

Protein sequence:

>501_residues
MRISDFLVRELGRRQVVLFFLLATMLYILPLILADFPYIDDNWRTLAAGNAWAGQGRLFMDWLYQALTFTGAAPNIFPLP
LLLATVAMSFALTRLTFHYFPEPTVACCLVPLPLWYNPFLLQNLSYQYDGAGMALSLVAVIYAITFCGASRIQRWLVPSA
LLALAIGLYQISLNVFLGLCCLELLRNVHRRVPWSELWHQSGWRLAQLLLAVLIYSVTAYPFTDHGRTQLLKASADPLLQ
IGINIARVMEKVALLFHGGYTAVFIALVLCAVIGAVQLGRQIRERHLSRAKGLLLSFSCLLAMPLIVLLVPGMTLLFRDF
NEGARTLMGFGVLLMLLFYLAYVGLTSLHSRLPLLLAIPLLATLSLSFAYGRVLMMEKTFANSALFSLSQDISSHRELRE
AKRIYLSVTYSDRWLAGAEGTFKQLPVLRYLLNIDYFMLAENLPSAGITNVVAERERRNATRVGYQGFPALVDRLYYRIY
LTGDYGFIVMKEPPHGRLLSW

Sequences:

>Translated_501_residues
MRISDFLVRELGRRQVVLFFLLATMLYILPLILADFPYIDDNWRTLAAGNAWAGQGRLFMDWLYQALTFTGAAPNIFPLP
LLLATVAMSFALTRLTFHYFPEPTVACCLVPLPLWYNPFLLQNLSYQYDGAGMALSLVAVIYAITFCGASRIQRWLVPSA
LLALAIGLYQISLNVFLGLCCLELLRNVHRRVPWSELWHQSGWRLAQLLLAVLIYSVTAYPFTDHGRTQLLKASADPLLQ
IGINIARVMEKVALLFHGGYTAVFIALVLCAVIGAVQLGRQIRERHLSRAKGLLLSFSCLLAMPLIVLLVPGMTLLFRDF
NEGARTLMGFGVLLMLLFYLAYVGLTSLHSRLPLLLAIPLLATLSLSFAYGRVLMMEKTFANSALFSLSQDISSHRELRE
AKRIYLSVTYSDRWLAGAEGTFKQLPVLRYLLNIDYFMLAENLPSAGITNVVAERERRNATRVGYQGFPALVDRLYYRIY
LTGDYGFIVMKEPPHGRLLSW
>Mature_501_residues
MRISDFLVRELGRRQVVLFFLLATMLYILPLILADFPYIDDNWRTLAAGNAWAGQGRLFMDWLYQALTFTGAAPNIFPLP
LLLATVAMSFALTRLTFHYFPEPTVACCLVPLPLWYNPFLLQNLSYQYDGAGMALSLVAVIYAITFCGASRIQRWLVPSA
LLALAIGLYQISLNVFLGLCCLELLRNVHRRVPWSELWHQSGWRLAQLLLAVLIYSVTAYPFTDHGRTQLLKASADPLLQ
IGINIARVMEKVALLFHGGYTAVFIALVLCAVIGAVQLGRQIRERHLSRAKGLLLSFSCLLAMPLIVLLVPGMTLLFRDF
NEGARTLMGFGVLLMLLFYLAYVGLTSLHSRLPLLLAIPLLATLSLSFAYGRVLMMEKTFANSALFSLSQDISSHRELRE
AKRIYLSVTYSDRWLAGAEGTFKQLPVLRYLLNIDYFMLAENLPSAGITNVVAERERRNATRVGYQGFPALVDRLYYRIY
LTGDYGFIVMKEPPHGRLLSW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56467; Mature: 56467

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRISDFLVRELGRRQVVLFFLLATMLYILPLILADFPYIDDNWRTLAAGNAWAGQGRLFM
CCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCHHH
DWLYQALTFTGAAPNIFPLPLLLATVAMSFALTRLTFHYFPEPTVACCLVPLPLWYNPFL
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCHHH
LQNLSYQYDGAGMALSLVAVIYAITFCGASRIQRWLVPSALLALAIGLYQISLNVFLGLC
HHCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CLELLRNVHRRVPWSELWHQSGWRLAQLLLAVLIYSVTAYPFTDHGRTQLLKASADPLLQ
HHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCHHHH
IGINIARVMEKVALLFHGGYTAVFIALVLCAVIGAVQLGRQIRERHLSRAKGLLLSFSCL
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAMPLIVLLVPGMTLLFRDFNEGARTLMGFGVLLMLLFYLAYVGLTSLHSRLPLLLAIPL
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LATLSLSFAYGRVLMMEKTFANSALFSLSQDISSHRELREAKRIYLSVTYSDRWLAGAEG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCEECCCCC
TFKQLPVLRYLLNIDYFMLAENLPSAGITNVVAERERRNATRVGYQGFPALVDRLYYRIY
CHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHCCHHHCCCCCCHHHHHHHHEEEE
LTGDYGFIVMKEPPHGRLLSW
EECCCEEEEEECCCCCCCCCC
>Mature Secondary Structure
MRISDFLVRELGRRQVVLFFLLATMLYILPLILADFPYIDDNWRTLAAGNAWAGQGRLFM
CCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCHHH
DWLYQALTFTGAAPNIFPLPLLLATVAMSFALTRLTFHYFPEPTVACCLVPLPLWYNPFL
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCHHH
LQNLSYQYDGAGMALSLVAVIYAITFCGASRIQRWLVPSALLALAIGLYQISLNVFLGLC
HHCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CLELLRNVHRRVPWSELWHQSGWRLAQLLLAVLIYSVTAYPFTDHGRTQLLKASADPLLQ
HHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCHHHH
IGINIARVMEKVALLFHGGYTAVFIALVLCAVIGAVQLGRQIRERHLSRAKGLLLSFSCL
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAMPLIVLLVPGMTLLFRDFNEGARTLMGFGVLLMLLFYLAYVGLTSLHSRLPLLLAIPL
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LATLSLSFAYGRVLMMEKTFANSALFSLSQDISSHRELREAKRIYLSVTYSDRWLAGAEG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCEECCCCC
TFKQLPVLRYLLNIDYFMLAENLPSAGITNVVAERERRNATRVGYQGFPALVDRLYYRIY
CHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHCCHHHCCCCCCHHHHHHHHEEEE
LTGDYGFIVMKEPPHGRLLSW
EECCCEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA