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The map label for this gene is motY [H]

Identifier: 77460739

GI number: 77460739

Start: 5092869

End: 5093777

Strand: Reverse

Name: motY [H]

Synonym: Pfl01_4518

Alternate gene names: 77460739

Gene position: 5093777-5092869 (Counterclockwise)

Preceding gene: 77460742

Following gene: 77460738

Centisome position: 79.12

GC content: 62.82

Gene sequence:

>909_bases
GTGCGCCAGCGATATTTAGCCTTGCTCAGTGTGTTTGCCAGCCTCCCCGCGATGGCACTGACCTACCAGACCCGTCTGGA
GAACATTGAGTGGACGGTCGAGGGCGACAAGTTCGAGTGCCGTCTGACGCAGCCGATCACTGATTTTGGCTCAGGGCAAT
TCGTGCGCAAGGCCGGCGAGCAGGCGACCTTCCGCCTGAACGCCTACAACGCCATGCTCGGCGGTGGTTCGGCGACCTTG
CTGGCAGCGGCTGCGCCGTGGCAGCCGGGTCGTGGCGACATCAATCTGGGCACGGTTCGACTGGGCAGCGGCAACGTGCT
GTTCAACAGTTCTCAATCCCAGGCCGGGCAGTTGATCAGCGGGCTGATGGACGGTCGCAGCCCGGTGGTGCGCCGGGCAT
CGGGCGATGGTCGGGTGTCGGAAGTGCGCCTGTTGCCGGTCAAGTTCAGCAAGGCGTTCAATGACTATCAGACCTGCGTG
GCGAAACTGCTCCCGCAGAATTTCGATCAGGTCAAGCAATCGCAGATCGGCTTCCCCGGCGAAGGCATCGAACTGGACGC
CGCCGCCAAGGCCAAGCTGCAAGTGATGCTCGAGTACATGAAGGCCGATCCGACGGTCAATCACATCGAACTCGACGGCC
ACTCGGACAACAGCGGCAATCGCCTGACCAATCGCGAACTGTCGCGCCGCCGCGCGCTGGCCGTGGTCGACTTCTTCAAG
GCCAACGGCATCCAGGAGTCGCAGATCACCGTGCGTTTCCATGGTGAGCGTTATCCTCTGGTGCCGAACACCAATGCCGC
CAACCGGGCCAAGAACCGTCGGGTCAATGTGCACCTTGCGCGGGTGGCACCGACGACTGCTCCAGCGCCTCAGGCCAGCA
CACCTGCCAACACTGCGGCGACTTCCTGA

Upstream 100 bases:

>100_bases
CTCGCTATCAAGTTTTGCGACGAGCGTCCGATATCCCATAGGTATGCCGTAAAGATGTATGTCTCGGTCTTTTTTGTTGT
AGAAGCCAATGGAGCCTCCC

Downstream 100 bases:

>100_bases
CCTGCCGGTCATCGTCGCTCTCTCGACAGATTCTGTCGCTTTGTCGTCTTAAGCTGTCGCGCCTCTGTAAATTATCGCGT
TTGAGCGGTAGACTCCTCGG

Product: OmpA/MotB

Products: NA

Alternate protein names: Polar flagellum motor protein [H]

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MRQRYLALLSVFASLPAMALTYQTRLENIEWTVEGDKFECRLTQPITDFGSGQFVRKAGEQATFRLNAYNAMLGGGSATL
LAAAAPWQPGRGDINLGTVRLGSGNVLFNSSQSQAGQLISGLMDGRSPVVRRASGDGRVSEVRLLPVKFSKAFNDYQTCV
AKLLPQNFDQVKQSQIGFPGEGIELDAAAKAKLQVMLEYMKADPTVNHIELDGHSDNSGNRLTNRELSRRRALAVVDFFK
ANGIQESQITVRFHGERYPLVPNTNAANRAKNRRVNVHLARVAPTTAPAPQASTPANTAATS

Sequences:

>Translated_302_residues
MRQRYLALLSVFASLPAMALTYQTRLENIEWTVEGDKFECRLTQPITDFGSGQFVRKAGEQATFRLNAYNAMLGGGSATL
LAAAAPWQPGRGDINLGTVRLGSGNVLFNSSQSQAGQLISGLMDGRSPVVRRASGDGRVSEVRLLPVKFSKAFNDYQTCV
AKLLPQNFDQVKQSQIGFPGEGIELDAAAKAKLQVMLEYMKADPTVNHIELDGHSDNSGNRLTNRELSRRRALAVVDFFK
ANGIQESQITVRFHGERYPLVPNTNAANRAKNRRVNVHLARVAPTTAPAPQASTPANTAATS
>Mature_302_residues
MRQRYLALLSVFASLPAMALTYQTRLENIEWTVEGDKFECRLTQPITDFGSGQFVRKAGEQATFRLNAYNAMLGGGSATL
LAAAAPWQPGRGDINLGTVRLGSGNVLFNSSQSQAGQLISGLMDGRSPVVRRASGDGRVSEVRLLPVKFSKAFNDYQTCV
AKLLPQNFDQVKQSQIGFPGEGIELDAAAKAKLQVMLEYMKADPTVNHIELDGHSDNSGNRLTNRELSRRRALAVVDFFK
ANGIQESQITVRFHGERYPLVPNTNAANRAKNRRVNVHLARVAPTTAPAPQASTPANTAATS

Specific function: Plays the role of a stator in the sodium flagellar motor, stabilizing the force-generating unit through direct interaction with the cell wall. Involved in adherence and invasion of fish cell line [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001035
- InterPro:   IPR006690
- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 32846; Mature: 32846

Theoretical pI: Translated: 10.37; Mature: 10.37

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQRYLALLSVFASLPAMALTYQTRLENIEWTVEGDKFECRLTQPITDFGSGQFVRKAGE
CCHHHHHHHHHHHHCHHHHHHHHHHHCCEEEEEECCEEEEEECCCCCCCCCCHHHHHCCC
QATFRLNAYNAMLGGGSATLLAAAAPWQPGRGDINLGTVRLGSGNVLFNSSQSQAGQLIS
CEEEEEEEEEEEECCCCEEEEEEECCCCCCCCCEEEEEEEECCCCEEEECCHHHHHHHHH
GLMDGRSPVVRRASGDGRVSEVRLLPVKFSKAFNDYQTCVAKLLPQNFDQVKQSQIGFPG
HHHCCCCCEEEECCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCC
EGIELDAAAKAKLQVMLEYMKADPTVNHIELDGHSDNSGNRLTNRELSRRRALAVVDFFK
CCEEECHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHEEHHH
ANGIQESQITVRFHGERYPLVPNTNAANRAKNRRVNVHLARVAPTTAPAPQASTPANTAA
HCCCCCCEEEEEECCCCCCCCCCCCCHHHHCCCEEEEEEEEECCCCCCCCCCCCCCCCCC
TS
CC
>Mature Secondary Structure
MRQRYLALLSVFASLPAMALTYQTRLENIEWTVEGDKFECRLTQPITDFGSGQFVRKAGE
CCHHHHHHHHHHHHCHHHHHHHHHHHCCEEEEEECCEEEEEECCCCCCCCCCHHHHHCCC
QATFRLNAYNAMLGGGSATLLAAAAPWQPGRGDINLGTVRLGSGNVLFNSSQSQAGQLIS
CEEEEEEEEEEEECCCCEEEEEEECCCCCCCCCEEEEEEEECCCCEEEECCHHHHHHHHH
GLMDGRSPVVRRASGDGRVSEVRLLPVKFSKAFNDYQTCVAKLLPQNFDQVKQSQIGFPG
HHHCCCCCEEEECCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCC
EGIELDAAAKAKLQVMLEYMKADPTVNHIELDGHSDNSGNRLTNRELSRRRALAVVDFFK
CCEEECHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHEEHHH
ANGIQESQITVRFHGERYPLVPNTNAANRAKNRRVNVHLARVAPTTAPAPQASTPANTAA
HCCCCCCEEEEEECCCCCCCCCCCCCHHHHCCCEEEEEEEEECCCCCCCCCCCCCCCCCC
TS
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA