| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77460709
Identifier: 77460709
GI number: 77460709
Start: 5060507
End: 5061853
Strand: Direct
Name: 77460709
Synonym: Pfl01_4488
Alternate gene names: NA
Gene position: 5060507-5061853 (Clockwise)
Preceding gene: 77460708
Following gene: 77460710
Centisome position: 78.6
GC content: 62.81
Gene sequence:
>1347_bases ATGATTCGTATGCCTCTGGCTACCGCCAGTCTGCTGGCCATCGCTATTTCCCTCGCCGGTTGCGGCGAAGGTAAAGACAA AGAAAAGGCCGCCGCTCCTGCGCCGACTCCGGCTGCCAGCACCGCTGCACCGGCTGCGCCAGCAGCAGCCGGTAAAGTCG ACGAGGCCGCCGGCAAAGCCGTTGTCGCGCACTACGCCGACATGGTCTTCGCCGTTTACAGCGACGCCGAATCCACCGCG AAAACCCTGCAAACCGCCATCGACGCGTTCCTCGCCAAGCCGGACGCCGACACCCTGAAAGCCGCCAAGGCTGCCTGGGT CGCCGCCCGTGTTCCTTACCTGCAGAGCGAAGTGTTCCGCTTCGGCAACACCATCATCGACGACTGGGAAGGTCAGGTGA ACGCCTGGCCTCTGGACGAAGGCCTGATCGACTACGTCGACAAGTCCTACGAACACGCACTGGGCAATCCAGGCGCCACC GCCAACATCATCGCCAACACCGAAGTACAGGTCGGCGAAGACAAGGTCGACGTCAAGGACATCACCCCGGAAAAACTCGC CAGCCTGAACGAGCTGGGCGGTTCCGAAGCCAACGTTGCCACCGGCTACCATGCCATCGAATTCCTGCTCTGGGGCCAGG ATCTGAACAGCACCGGCCCGGGCGCCGGCAACCGTCCGGCGTCGGACTATCTGGAAGGCAAAGGCGCCACTGGCGGTCAC AACGATCGTCGTCGTGCCTACCTGAAAGCCGTGACCCAGCTGCTGGTCAGCGATCTGGAAGAAATGGTCGCCAACTGGAA GCCGAACGTGGCCGACAACTACCGCGCCACCCTGGAAGCCGAACCGGCTGAAAGCGGCCTGCGCAAAATGCTGTTCGGCA TGGGCAGCCTGTCCCTGGGCGAACTGGCCGGCGAGCGCATGAAGGTGTCCCTGGAAGCGAATTCCCCGGAAGACGAACAG GATTGCTTCAGCGACAACACCCACAACTCGCACTTCTACGATGCCAAGGGCATTCGTAACGTGTACCTGGGCGAGTACAC CCGCGTCGACGGCACCAAACTGACCGGCGCCAGCCTGTCGTCGCTGGTGGCCAAGGTCGACCCGGCTGCCGACACCGCGC TGAAAGCCGATCTGGCCGCCACCGAAGCCAAGATCCAGGTCATGGTCGATCACGCCAACAAGGGTGAGCACTACGACCAG TTGATCGCAGCCGGCAACACGGCTGGTAACCAGATCGTGCGCGATGCCATCGCTTCGCTGGTCAAGCAGACCGGTTCGAT CGAGGCCGCAGCCGGCAAGCTCGGCATCAGCGACCTGAACCCGGACAACGCCGATCACGAGTTCTGA
Upstream 100 bases:
>100_bases AGCTACAACCCTTTACACATAATGCGAAAGATTTGCATTATGTCGCAGCTTTGCGCACCCCCGCGCCTGTCCACTCAATT ACCGAAGCAGGATGTTCGCC
Downstream 100 bases:
>100_bases TCACAGCGTCCGTGTTAAGAAAGGCGACCTTCGGGTCGCCTTTTTCATCACTGCTTTTTGTGATGCTGCTGATGGCCCCA TCGCTGGCAAGCCAGCGATA
Product: hypothetical protein
Products: NA
Alternate protein names: Iron-Regulated Protein A; Insulin-Cleaving Metalloproteinase Outer Membrane Protein; Peptidase; Imelysin; Lipoprotein; Peptidase Imelysin Family; Insulin-Cleaving Metalloproteinase Outer Membrane; Iron-Regulated Lipoprotein; Imelysin Family; Exported Protein
Number of amino acids: Translated: 448; Mature: 448
Protein sequence:
>448_residues MIRMPLATASLLAIAISLAGCGEGKDKEKAAAPAPTPAASTAAPAAPAAAGKVDEAAGKAVVAHYADMVFAVYSDAESTA KTLQTAIDAFLAKPDADTLKAAKAAWVAARVPYLQSEVFRFGNTIIDDWEGQVNAWPLDEGLIDYVDKSYEHALGNPGAT ANIIANTEVQVGEDKVDVKDITPEKLASLNELGGSEANVATGYHAIEFLLWGQDLNSTGPGAGNRPASDYLEGKGATGGH NDRRRAYLKAVTQLLVSDLEEMVANWKPNVADNYRATLEAEPAESGLRKMLFGMGSLSLGELAGERMKVSLEANSPEDEQ DCFSDNTHNSHFYDAKGIRNVYLGEYTRVDGTKLTGASLSSLVAKVDPAADTALKADLAATEAKIQVMVDHANKGEHYDQ LIAAGNTAGNQIVRDAIASLVKQTGSIEAAAGKLGISDLNPDNADHEF
Sequences:
>Translated_448_residues MIRMPLATASLLAIAISLAGCGEGKDKEKAAAPAPTPAASTAAPAAPAAAGKVDEAAGKAVVAHYADMVFAVYSDAESTA KTLQTAIDAFLAKPDADTLKAAKAAWVAARVPYLQSEVFRFGNTIIDDWEGQVNAWPLDEGLIDYVDKSYEHALGNPGAT ANIIANTEVQVGEDKVDVKDITPEKLASLNELGGSEANVATGYHAIEFLLWGQDLNSTGPGAGNRPASDYLEGKGATGGH NDRRRAYLKAVTQLLVSDLEEMVANWKPNVADNYRATLEAEPAESGLRKMLFGMGSLSLGELAGERMKVSLEANSPEDEQ DCFSDNTHNSHFYDAKGIRNVYLGEYTRVDGTKLTGASLSSLVAKVDPAADTALKADLAATEAKIQVMVDHANKGEHYDQ LIAAGNTAGNQIVRDAIASLVKQTGSIEAAAGKLGISDLNPDNADHEF >Mature_448_residues MIRMPLATASLLAIAISLAGCGEGKDKEKAAAPAPTPAASTAAPAAPAAAGKVDEAAGKAVVAHYADMVFAVYSDAESTA KTLQTAIDAFLAKPDADTLKAAKAAWVAARVPYLQSEVFRFGNTIIDDWEGQVNAWPLDEGLIDYVDKSYEHALGNPGAT ANIIANTEVQVGEDKVDVKDITPEKLASLNELGGSEANVATGYHAIEFLLWGQDLNSTGPGAGNRPASDYLEGKGATGGH NDRRRAYLKAVTQLLVSDLEEMVANWKPNVADNYRATLEAEPAESGLRKMLFGMGSLSLGELAGERMKVSLEANSPEDEQ DCFSDNTHNSHFYDAKGIRNVYLGEYTRVDGTKLTGASLSSLVAKVDPAADTALKADLAATEAKIQVMVDHANKGEHYDQ LIAAGNTAGNQIVRDAIASLVKQTGSIEAAAGKLGISDLNPDNADHEF
Specific function: Unknown
COG id: COG3487
COG function: function code P; Uncharacterized iron-regulated protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47116; Mature: 47116
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRMPLATASLLAIAISLAGCGEGKDKEKAAAPAPTPAASTAAPAAPAAAGKVDEAAGKA CCCCCHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH VVAHYADMVFAVYSDAESTAKTLQTAIDAFLAKPDADTLKAAKAAWVAARVPYLQSEVFR HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHH FGNTIIDDWEGQVNAWPLDEGLIDYVDKSYEHALGNPGATANIIANTEVQVGEDKVDVKD HCCHHHCCCCCCEECCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCEEEECCCCCCCCC ITPEKLASLNELGGSEANVATGYHAIEFLLWGQDLNSTGPGAGNRPASDYLEGKGATGGH CCHHHHHHHHHCCCCCCCHHHHHHHEEHEEECCCCCCCCCCCCCCCHHHHHCCCCCCCCC NDRRRAYLKAVTQLLVSDLEEMVANWKPNVADNYRATLEAEPAESGLRKMLFGMGSLSLG CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCHH ELAGERMKVSLEANSPEDEQDCFSDNTHNSHFYDAKGIRNVYLGEYTRVDGTKLTGASLS HHCCCEEEEEEECCCCCCHHHHHCCCCCCCEEECCCCCCEECCCCEEECCCCEECHHHHH SLVAKVDPAADTALKADLAATEAKIQVMVDHANKGEHYDQLIAAGNTAGNQIVRDAIASL HHHHHCCCHHHHHHHHHHHHCCEEEEEEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHH VKQTGSIEAAAGKLGISDLNPDNADHEF HHHCCCCCHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MIRMPLATASLLAIAISLAGCGEGKDKEKAAAPAPTPAASTAAPAAPAAAGKVDEAAGKA CCCCCHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH VVAHYADMVFAVYSDAESTAKTLQTAIDAFLAKPDADTLKAAKAAWVAARVPYLQSEVFR HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHH FGNTIIDDWEGQVNAWPLDEGLIDYVDKSYEHALGNPGATANIIANTEVQVGEDKVDVKD HCCHHHCCCCCCEECCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCEEEECCCCCCCCC ITPEKLASLNELGGSEANVATGYHAIEFLLWGQDLNSTGPGAGNRPASDYLEGKGATGGH CCHHHHHHHHHCCCCCCCHHHHHHHEEHEEECCCCCCCCCCCCCCCHHHHHCCCCCCCCC NDRRRAYLKAVTQLLVSDLEEMVANWKPNVADNYRATLEAEPAESGLRKMLFGMGSLSLG CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCHH ELAGERMKVSLEANSPEDEQDCFSDNTHNSHFYDAKGIRNVYLGEYTRVDGTKLTGASLS HHCCCEEEEEEECCCCCCHHHHHCCCCCCCEEECCCCCCEECCCCEEECCCCEECHHHHH SLVAKVDPAADTALKADLAATEAKIQVMVDHANKGEHYDQLIAAGNTAGNQIVRDAIASL HHHHHCCCHHHHHHHHHHHHCCEEEEEEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHH VKQTGSIEAAAGKLGISDLNPDNADHEF HHHCCCCCHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA