| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77460710
Identifier: 77460710
GI number: 77460710
Start: 5062077
End: 5063504
Strand: Direct
Name: 77460710
Synonym: Pfl01_4489
Alternate gene names: NA
Gene position: 5062077-5063504 (Clockwise)
Preceding gene: 77460709
Following gene: 77460711
Centisome position: 78.62
GC content: 64.99
Gene sequence:
>1428_bases ATGCCCTCGCTGCCTCTTCGCTTGTCCGCACTGTTTCTGGCCCTGGGCCTGAGTGCCTGCGATGACGCCCCGCGTTTCAC CAAGGCCGAGCCGGGTGAGGCCCGTTCCGGCGGCGCGGCGACCGTGCGCAAGAGCGATCAGAACGCGTTCTCCCTGCCGT CGGCCAACCTGCCGCCCTCGCGGCGGGTGGACTTCAGCGTCGGCAACAGCTTCTTCCGCAGCCCGTGGGTGATCGCGCCG TCGACCACCACCGCCCGCGACGGCCTCGGCCCGCTGTTCAACACCAACGCCTGCCAGAACTGCCACATCAAGGACGGCCG CGGCCATCCGCCGACGCCGGATGCGGCCAACGCGGTGTCGATGCTGGTGCGCCTGTCGATTCCCGATGCGCCGGCTTATG CCAAGGTCATCGAACAGGTGGGCGTAGTGCCGGAGCCCGTCTACGGCGGCCAGTTCCAGGACATGGCCGTCCCCGGCGTC GCGCCGGAAGGCAAGGTGCGGGTCGATTACACACCGGTGCCGGTCCGCTTCAAGGACGGCACCGAGGTCGAGCTGCGTAA ACCGGTCTTGCAGATCACCCAGCTCGGCTACGGCCCGATGCACCCGGACACACGTTTTTCTGCGCGAGTGGCTCCGCCAA TGATCGGCCTGGGCCTGCTCGAAGCGATCCCGGAAGAAGCGATACTCGCCAACGCCGCCGCGCAGGCCAAAGAGAACAAC GGCATCAACGGTCGGCCAAACCGGGTCTGGGACGATGAGCAGCAAAAAACCGTTATGGGGCGATTTGGCTGGAAAGCCGG CCAGCCGAACCTCAATCAACAAAATGTTCACGCGTTTTCGGGTGATATGGGCCTCACGACCAGCCTGAGACCGTTTGATG ACTGCACCGACGCGCAAACCGCCTGCAAACAGGCGCCCAACGGCAATGGCCCGGCCGGAGAACCTGAAGTCAGCGACAAC ATCCTGCGTCTGGTGCTGTTCTACAGCCGCAACCTCGCCGTTCCCGCCCGCCGTGGCGTCAACGATGCGCAAGTGCTGGC CGGCAAGAATCTGTTCTACCAGGCGGGATGCCAGTCCTGTCACACACCGAAATACACCACCGCCGCCAACGCCGCCGAAC CTGAACTGGCCAATCAAGTGATTCGCCCGTACAGCGATCTGCTGCTGCATGACATGGGCGAAGGCCTGGCGGACAACCGC ACTGAATTTCAGGCTTCCGGCCGCGACTGGCGCACCCCGCCGCTGTGGGGCATCGGCCTGACGCAGGCGGTCAGCGGCCA CACCCAGTTTCTGCATGACGGCCGCGCCCGCAACCTGCTCGAAGCCGTGCTCTGGCACGGCGGCGAAGCGAAAGCGGCAC AGCAACAGGTTTTGTCTTTCAACGCCGAGCAGCGTGCCGCGCTGCTGGCGTTCTTGAACTCACTTTAA
Upstream 100 bases:
>100_bases ACCCTGCCGCAAATCAAGCAAACGATAATTCCTCTTATTCAAACCCCCTCGCCCTGTTAGACTTTGCGCCTTTAAATTCG CCCCTCTTGCAGGAAGTCTG
Downstream 100 bases:
>100_bases ACACTTGAACGAATCGGGAGCCCGACATGTTCCGTCCCAAGCTGTTGTTCACCAGCCTTGCCGCACTGGCCCTCGGCGCG TGCTCGCCGCAGGATCCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: Lipoprotein; Thiol Oxidoreductase-Like; Thiol Oxidoreductase-Like Protein; Exported Protein; Signal Peptide
Number of amino acids: Translated: 475; Mature: 474
Protein sequence:
>475_residues MPSLPLRLSALFLALGLSACDDAPRFTKAEPGEARSGGAATVRKSDQNAFSLPSANLPPSRRVDFSVGNSFFRSPWVIAP STTTARDGLGPLFNTNACQNCHIKDGRGHPPTPDAANAVSMLVRLSIPDAPAYAKVIEQVGVVPEPVYGGQFQDMAVPGV APEGKVRVDYTPVPVRFKDGTEVELRKPVLQITQLGYGPMHPDTRFSARVAPPMIGLGLLEAIPEEAILANAAAQAKENN GINGRPNRVWDDEQQKTVMGRFGWKAGQPNLNQQNVHAFSGDMGLTTSLRPFDDCTDAQTACKQAPNGNGPAGEPEVSDN ILRLVLFYSRNLAVPARRGVNDAQVLAGKNLFYQAGCQSCHTPKYTTAANAAEPELANQVIRPYSDLLLHDMGEGLADNR TEFQASGRDWRTPPLWGIGLTQAVSGHTQFLHDGRARNLLEAVLWHGGEAKAAQQQVLSFNAEQRAALLAFLNSL
Sequences:
>Translated_475_residues MPSLPLRLSALFLALGLSACDDAPRFTKAEPGEARSGGAATVRKSDQNAFSLPSANLPPSRRVDFSVGNSFFRSPWVIAP STTTARDGLGPLFNTNACQNCHIKDGRGHPPTPDAANAVSMLVRLSIPDAPAYAKVIEQVGVVPEPVYGGQFQDMAVPGV APEGKVRVDYTPVPVRFKDGTEVELRKPVLQITQLGYGPMHPDTRFSARVAPPMIGLGLLEAIPEEAILANAAAQAKENN GINGRPNRVWDDEQQKTVMGRFGWKAGQPNLNQQNVHAFSGDMGLTTSLRPFDDCTDAQTACKQAPNGNGPAGEPEVSDN ILRLVLFYSRNLAVPARRGVNDAQVLAGKNLFYQAGCQSCHTPKYTTAANAAEPELANQVIRPYSDLLLHDMGEGLADNR TEFQASGRDWRTPPLWGIGLTQAVSGHTQFLHDGRARNLLEAVLWHGGEAKAAQQQVLSFNAEQRAALLAFLNSL >Mature_474_residues PSLPLRLSALFLALGLSACDDAPRFTKAEPGEARSGGAATVRKSDQNAFSLPSANLPPSRRVDFSVGNSFFRSPWVIAPS TTTARDGLGPLFNTNACQNCHIKDGRGHPPTPDAANAVSMLVRLSIPDAPAYAKVIEQVGVVPEPVYGGQFQDMAVPGVA PEGKVRVDYTPVPVRFKDGTEVELRKPVLQITQLGYGPMHPDTRFSARVAPPMIGLGLLEAIPEEAILANAAAQAKENNG INGRPNRVWDDEQQKTVMGRFGWKAGQPNLNQQNVHAFSGDMGLTTSLRPFDDCTDAQTACKQAPNGNGPAGEPEVSDNI LRLVLFYSRNLAVPARRGVNDAQVLAGKNLFYQAGCQSCHTPKYTTAANAAEPELANQVIRPYSDLLLHDMGEGLADNRT EFQASGRDWRTPPLWGIGLTQAVSGHTQFLHDGRARNLLEAVLWHGGEAKAAQQQVLSFNAEQRAALLAFLNSL
Specific function: Unknown
COG id: COG3488
COG function: function code C; Predicted thiol oxidoreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51098; Mature: 50967
Theoretical pI: Translated: 6.99; Mature: 6.99
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51007 CYTC L=RR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSLPLRLSALFLALGLSACDDAPRFTKAEPGEARSGGAATVRKSDQNAFSLPSANLPPS CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEECCCCCCCCC RRVDFSVGNSFFRSPWVIAPSTTTARDGLGPLFNTNACQNCHIKDGRGHPPTPDAANAVS CCEEHHHCCHHHCCCEEECCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH MLVRLSIPDAPAYAKVIEQVGVVPEPVYGGQFQDMAVPGVAPEGKVRVDYTPVPVRFKDG HHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEECCC TEVELRKPVLQITQLGYGPMHPDTRFSARVAPPMIGLGLLEAIPEEAILANAAAQAKENN CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCC GINGRPNRVWDDEQQKTVMGRFGWKAGQPNLNQQNVHAFSGDMGLTTSLRPFDDCTDAQT CCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHH ACKQAPNGNGPAGEPEVSDNILRLVLFYSRNLAVPARRGVNDAQVLAGKNLFYQAGCQSC HHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHCCCHHHHHCCCCC HTPKYTTAANAAEPELANQVIRPYSDLLLHDMGEGLADNRTEFQASGRDWRTPPLWGIGL CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCH TQAVSGHTQFLHDGRARNLLEAVLWHGGEAKAAQQQVLSFNAEQRAALLAFLNSL HHHHCCHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHCC >Mature Secondary Structure PSLPLRLSALFLALGLSACDDAPRFTKAEPGEARSGGAATVRKSDQNAFSLPSANLPPS CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEECCCCCCCCC RRVDFSVGNSFFRSPWVIAPSTTTARDGLGPLFNTNACQNCHIKDGRGHPPTPDAANAVS CCEEHHHCCHHHCCCEEECCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH MLVRLSIPDAPAYAKVIEQVGVVPEPVYGGQFQDMAVPGVAPEGKVRVDYTPVPVRFKDG HHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEECCC TEVELRKPVLQITQLGYGPMHPDTRFSARVAPPMIGLGLLEAIPEEAILANAAAQAKENN CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCC GINGRPNRVWDDEQQKTVMGRFGWKAGQPNLNQQNVHAFSGDMGLTTSLRPFDDCTDAQT CCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHH ACKQAPNGNGPAGEPEVSDNILRLVLFYSRNLAVPARRGVNDAQVLAGKNLFYQAGCQSC HHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHCCCHHHHHCCCCC HTPKYTTAANAAEPELANQVIRPYSDLLLHDMGEGLADNRTEFQASGRDWRTPPLWGIGL CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCH TQAVSGHTQFLHDGRARNLLEAVLWHGGEAKAAQQQVLSFNAEQRAALLAFLNSL HHHHCCHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA