| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77460677
Identifier: 77460677
GI number: 77460677
Start: 5025303
End: 5027978
Strand: Direct
Name: 77460677
Synonym: Pfl01_4456
Alternate gene names: NA
Gene position: 5025303-5027978 (Clockwise)
Preceding gene: 77460676
Following gene: 77460678
Centisome position: 78.05
GC content: 59.57
Gene sequence:
>2676_bases ATGAACCCATCCATTGACTCGTACACACCATCAGTGTCGGCCACTCACCCTCAAGGTCAGGCCATCAGACAAATTGCCTA CCTGCGCAAGGTGGCGGGCGAGGACGCGCAGGCACTCATTACCCGTCAACACCATGATGTTGGCGGACGAACCGTGACTG AACGCGATCCGCGTCTGTCCATTGCCAGTCAGGTGACCGTTTTTGCGCTGAGTGGCCAGCCACTAAGGGTCCAGAGTGTC GATGCCGGCACAAGCCTGGTTCTGCCCGGTCGGTCGGGAGAAGAAACTCGGCGCTGGGATGCACGGGGCAATCACTGGCT TACGACCTACGACAACCAATTGCGCCCGTTGACCGTTGAAGAGAACGGCACGCCGGATATCGAGACCTTCACCTACGCTG ATCGCTCGGCCGATCCCGGACACAACCTGCGCGGGCAACTGATCCGGCGGGAAGATCCGTCGGGTTCCGTGGATGTTCGC AGCTTTGGACTGTCCGGTCAGGCACTGCGCGAGACCCGCACCTTTCACGATGGCAACGCGTTCGTCAGCGGTCGCCGTTA TAGCCCGCTGGGCGCGGTGTTGACGCAGACCGATGCCGGGGGACACCAGCAACAGTCGACATACGACGTGGCCGGTCAAC TCAATCGCGTGCAATTGCAGATCAACGGACAGACCACCTGGCAAACCGTGTTGCAGGATGCGCAGTACAACGCCTCCGGA CAGCTCATCGAACAACAGGCCGGCAACGGTGTGACCAGCCACTGGCACTACCGCGCCGCCGATGGGCGCCTGCACTGTCA CCGCGCGCAGAAGGGCTCGGGACCGGTGCTTCAGGACTTCAAGTATGAATACGACCGGGTGGGCAATATCGTCCGCATTC TCGATCACGCCTACACGCCGACCTACTTCAGCAACCAGCGGGTCGATGGCCATCAGGAGTTCGATTACGACACGCTGTAC CGACTGATTAGCGCCACCGGCTACAGCGACGCCCCGCCCTCGGACAGGCTCGGTTTGCCCCAGTCGACCAATCCCGATGA CCGACGCAATTACGTCGAGCACTACGATTACGACCACGGCGACAATCTTGTCAAAACCATCCACGTGCGCGACGGCACCA GCCACACCTTCGAGATGTGCATCGACCCCGCCAGCAATCGCGGCGTGCGCTGGAAACCCGGCGATCCGCCGCCGGATTTC AGCCAACGGTTCGATCCTGCCGGCAACCTGCGGGCCCTGCAACCCGGCGTGCCGATGCACTGGAACGCCCATGGCGAACT GGACAAGGTGACGCTCGTCGATCGCAACGGCAGCAGCGCCAACGATGAAGAGTATTACCGCTACAGCCGGGGCCAGCGGG TCTACAAACGCCACGACACCCACACAACGAAAGTCAGTCACTTTCATGAAGTGCGCTATTTGCCGGGGCTGGAGATCCGC ACCAAGGACAACGGCGAGGAGTTGCACGTCATCACGCTCGATATCGGATCTGGCGCAGCGCGCTGCCTGCACTGGAAGAA GGATCCGGCAAAAATCGGTGCCGACCAGCTGCGATTCACGCTGCCGGATCACCTGGGTTCGGCTGTCAGGGAACTCGATG CACAGGCGCGATTGATCACCGACGAGCGCTATCTGCCATTCGGCGGCACAGCCGTTTATACCAGGCACTCCGCCGTGGAG GTCGATTACAAGACCGTCCGTTACTCGGGCAAGGAAATGGATGTCACCCGGCTGTATTACTACGGCGCCCGCTACTACGC CGATTGGCTGGGGCGCTGGGTCAGTGCCGATCGGGCGGGCACTGTCGACGGACTGAATCTCTATGCGTTCGTGGGGAACA ATCCGATTATCCATGTCGACAAAACGGGCAATGTGAAGGTGCTTTTTGATGTGGCGAAAGGCTTTATCGGCGTGCTCGAC AAAGCGGCAACCGCAGCAGGTCAGTTGGACTACCTTGCGAGAGAATTCGACGGCCTTGTTCCCGAAGACGCCGACATCAA CGAACTGCGCGAAAGCATCACTTTTGGCACATTCATGAAGTCCCGGCACGGGATCAAATCTGCCCTCTACGGCGCGGCAA AAGGTGCGGGTGTCGGCGCGGTTTTAGGCACCGCTTTACCGGGTATTGGCAACCTGATCGGCACAGCCGTGGGCACGCTC GTCGGGGCCATCGCTTTTCCGCTGTTGCGTTACCACTTTTTCAAAAAAAGCCTGAAGGCCGTGGAAACCCTTCGCACCCG GGAAATCGCCGCGGGAGTGACAGCTGTCGCCGATACCGCAGCCAATGTTGTGGAAGGGACGAAGAACCTGATCAACGGTG CCGGTGAACTCCAGCAGAGGATCAAGGCTGCAGCTGACAATCTCGGTTCTTATCCGCAACGGCTTCAGGAAATGTTCTAT CGTCAGCTGGATGACCTGATGGGCGATCAACAACGCGAAGTCATGAAACTGCTCAAAACCGGGCTCGATCCGTTTGACGC CATTGATCAGGTATTGAGTACCGCGCGCCAGCTTGTCGACTCCCCGAGCGAAGCAGACGGGGTAACGGCACGCTTGGCCG AACTGCTCCAATCGGCACAGCAAGACAGTCATCGGCCACTGAAAAAGCCGATCCCCAAACCCAGGACAAAAATGCAGCCG CAATTGCAACGCAGGATGAGCGAAACGTACGTCTGA
Upstream 100 bases:
>100_bases CCTGGATCGGCAGACAAGGCACACCACTGACATGCTCCATGGTCTGGCTGACACGGTTCGACACCACCGGGCCAGCCAAA AAGCTGCAGCGTGAACTCAA
Downstream 100 bases:
>100_bases GTCGCTTCGACAATACGCCGTACCGAGCGGGCACATGCTATCGTGCCCGCCCGTCCTGCCACCCCTTTGACCCAGCATGC TGCCGACTTCCCGTACCTTG
Product: insecticidal toxin protein
Products: NA
Alternate protein names: Insecticidal xin Protein; Insecticidal xin Complex; Insecticidal xin Complex Protein; C Component Of Insecticidal xin Complex; Rhs Family Protein-Like Protein; Insecticidal xin; YD Repeat Protein; Zinc Finger C2H2-Type Domain-Containing Protein; FG-GAP Repeat Protein; Insecticidal xin SepC/Tcc Class; Insecticial xin; Integrins Alpha Chain; Insecticidal xin Complex-Like Protein; Insecticial xin Complex; Yd Repeat-Containing Protein; Insecticidal xin SepC/TccC; Rhs Family Protein; Insecticidal xin Complex Protein TcaC; Insecticidal xin Complex TccC; Insecticidal xin Complex Protein Tccc
Number of amino acids: Translated: 891; Mature: 891
Protein sequence:
>891_residues MNPSIDSYTPSVSATHPQGQAIRQIAYLRKVAGEDAQALITRQHHDVGGRTVTERDPRLSIASQVTVFALSGQPLRVQSV DAGTSLVLPGRSGEETRRWDARGNHWLTTYDNQLRPLTVEENGTPDIETFTYADRSADPGHNLRGQLIRREDPSGSVDVR SFGLSGQALRETRTFHDGNAFVSGRRYSPLGAVLTQTDAGGHQQQSTYDVAGQLNRVQLQINGQTTWQTVLQDAQYNASG QLIEQQAGNGVTSHWHYRAADGRLHCHRAQKGSGPVLQDFKYEYDRVGNIVRILDHAYTPTYFSNQRVDGHQEFDYDTLY RLISATGYSDAPPSDRLGLPQSTNPDDRRNYVEHYDYDHGDNLVKTIHVRDGTSHTFEMCIDPASNRGVRWKPGDPPPDF SQRFDPAGNLRALQPGVPMHWNAHGELDKVTLVDRNGSSANDEEYYRYSRGQRVYKRHDTHTTKVSHFHEVRYLPGLEIR TKDNGEELHVITLDIGSGAARCLHWKKDPAKIGADQLRFTLPDHLGSAVRELDAQARLITDERYLPFGGTAVYTRHSAVE VDYKTVRYSGKEMDVTRLYYYGARYYADWLGRWVSADRAGTVDGLNLYAFVGNNPIIHVDKTGNVKVLFDVAKGFIGVLD KAATAAGQLDYLAREFDGLVPEDADINELRESITFGTFMKSRHGIKSALYGAAKGAGVGAVLGTALPGIGNLIGTAVGTL VGAIAFPLLRYHFFKKSLKAVETLRTREIAAGVTAVADTAANVVEGTKNLINGAGELQQRIKAAADNLGSYPQRLQEMFY RQLDDLMGDQQREVMKLLKTGLDPFDAIDQVLSTARQLVDSPSEADGVTARLAELLQSAQQDSHRPLKKPIPKPRTKMQP QLQRRMSETYV
Sequences:
>Translated_891_residues MNPSIDSYTPSVSATHPQGQAIRQIAYLRKVAGEDAQALITRQHHDVGGRTVTERDPRLSIASQVTVFALSGQPLRVQSV DAGTSLVLPGRSGEETRRWDARGNHWLTTYDNQLRPLTVEENGTPDIETFTYADRSADPGHNLRGQLIRREDPSGSVDVR SFGLSGQALRETRTFHDGNAFVSGRRYSPLGAVLTQTDAGGHQQQSTYDVAGQLNRVQLQINGQTTWQTVLQDAQYNASG QLIEQQAGNGVTSHWHYRAADGRLHCHRAQKGSGPVLQDFKYEYDRVGNIVRILDHAYTPTYFSNQRVDGHQEFDYDTLY RLISATGYSDAPPSDRLGLPQSTNPDDRRNYVEHYDYDHGDNLVKTIHVRDGTSHTFEMCIDPASNRGVRWKPGDPPPDF SQRFDPAGNLRALQPGVPMHWNAHGELDKVTLVDRNGSSANDEEYYRYSRGQRVYKRHDTHTTKVSHFHEVRYLPGLEIR TKDNGEELHVITLDIGSGAARCLHWKKDPAKIGADQLRFTLPDHLGSAVRELDAQARLITDERYLPFGGTAVYTRHSAVE VDYKTVRYSGKEMDVTRLYYYGARYYADWLGRWVSADRAGTVDGLNLYAFVGNNPIIHVDKTGNVKVLFDVAKGFIGVLD KAATAAGQLDYLAREFDGLVPEDADINELRESITFGTFMKSRHGIKSALYGAAKGAGVGAVLGTALPGIGNLIGTAVGTL VGAIAFPLLRYHFFKKSLKAVETLRTREIAAGVTAVADTAANVVEGTKNLINGAGELQQRIKAAADNLGSYPQRLQEMFY RQLDDLMGDQQREVMKLLKTGLDPFDAIDQVLSTARQLVDSPSEADGVTARLAELLQSAQQDSHRPLKKPIPKPRTKMQP QLQRRMSETYV >Mature_891_residues MNPSIDSYTPSVSATHPQGQAIRQIAYLRKVAGEDAQALITRQHHDVGGRTVTERDPRLSIASQVTVFALSGQPLRVQSV DAGTSLVLPGRSGEETRRWDARGNHWLTTYDNQLRPLTVEENGTPDIETFTYADRSADPGHNLRGQLIRREDPSGSVDVR SFGLSGQALRETRTFHDGNAFVSGRRYSPLGAVLTQTDAGGHQQQSTYDVAGQLNRVQLQINGQTTWQTVLQDAQYNASG QLIEQQAGNGVTSHWHYRAADGRLHCHRAQKGSGPVLQDFKYEYDRVGNIVRILDHAYTPTYFSNQRVDGHQEFDYDTLY RLISATGYSDAPPSDRLGLPQSTNPDDRRNYVEHYDYDHGDNLVKTIHVRDGTSHTFEMCIDPASNRGVRWKPGDPPPDF SQRFDPAGNLRALQPGVPMHWNAHGELDKVTLVDRNGSSANDEEYYRYSRGQRVYKRHDTHTTKVSHFHEVRYLPGLEIR TKDNGEELHVITLDIGSGAARCLHWKKDPAKIGADQLRFTLPDHLGSAVRELDAQARLITDERYLPFGGTAVYTRHSAVE VDYKTVRYSGKEMDVTRLYYYGARYYADWLGRWVSADRAGTVDGLNLYAFVGNNPIIHVDKTGNVKVLFDVAKGFIGVLD KAATAAGQLDYLAREFDGLVPEDADINELRESITFGTFMKSRHGIKSALYGAAKGAGVGAVLGTALPGIGNLIGTAVGTL VGAIAFPLLRYHFFKKSLKAVETLRTREIAAGVTAVADTAANVVEGTKNLINGAGELQQRIKAAADNLGSYPQRLQEMFY RQLDDLMGDQQREVMKLLKTGLDPFDAIDQVLSTARQLVDSPSEADGVTARLAELLQSAQQDSHRPLKKPIPKPRTKMQP QLQRRMSETYV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 98953; Mature: 98953
Theoretical pI: Translated: 7.30; Mature: 7.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPSIDSYTPSVSATHPQGQAIRQIAYLRKVAGEDAQALITRQHHDVGGRTVTERDPRLS CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEECCCCCCCE IASQVTVFALSGQPLRVQSVDAGTSLVLPGRSGEETRRWDARGNHWLTTYDNQLRPLTVE EECEEEEEEECCCCEEEEEECCCCEEEECCCCCCHHHHHCCCCCEEEEECCCCCCEEEEC ENGTPDIETFTYADRSADPGHNLRGQLIRREDPSGSVDVRSFGLSGQALRETRTFHDGNA CCCCCCCEEEEECCCCCCCCCCCCCCEEECCCCCCCEEEEEECCCCHHHHHHHCCCCCCE FVSGRRYSPLGAVLTQTDAGGHQQQSTYDVAGQLNRVQLQINGQTTWQTVLQDAQYNASG EECCCCCCCHHHHEEECCCCCCCCCCHHHHHCCCEEEEEEECCCHHHHHHHHHCCCCCCC QLIEQQAGNGVTSHWHYRAADGRLHCHRAQKGSGPVLQDFKYEYDRVGNIVRILDHAYTP HHHHHHCCCCCCCCCEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC TYFSNQRVDGHQEFDYDTLYRLISATGYSDAPPSDRLGLPQSTNPDDRRNYVEHYDYDHG CCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCC DNLVKTIHVRDGTSHTFEMCIDPASNRGVRWKPGDPPPDFSQRFDPAGNLRALQPGVPMH CCEEEEEEEECCCCCEEEEEECCCCCCCEECCCCCCCCCHHHCCCCCCCCEEECCCCCEE WNAHGELDKVTLVDRNGSSANDEEYYRYSRGQRVYKRHDTHTTKVSHFHEVRYLPGLEIR ECCCCCCEEEEEEECCCCCCCCHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHCCCCCEEE TKDNGEELHVITLDIGSGAARCLHWKKDPAKIGADQLRFTLPDHLGSAVRELDAQARLIT ECCCCCEEEEEEEECCCCCHHHEECCCCHHHCCHHHEEEECCHHHHHHHHHHHHHHEEEE DERYLPFGGTAVYTRHSAVEVDYKTVRYSGKEMDVTRLYYYGARYYADWLGRWVSADRAG CCCCCCCCCCEEEEECCEEEEEHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC TVDGLNLYAFVGNNPIIHVDKTGNVKVLFDVAKGFIGVLDKAATAAGQLDYLAREFDGLV CCCCCEEEEEECCCCEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PEDADINELRESITFGTFMKSRHGIKSALYGAAKGAGVGAVLGTALPGIGNLIGTAVGTL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHH VGAIAFPLLRYHFFKKSLKAVETLRTREIAAGVTAVADTAANVVEGTKNLINGAGELQQR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH IKAAADNLGSYPQRLQEMFYRQLDDLMGDQQREVMKLLKTGLDPFDAIDQVLSTARQLVD HHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHC SPSEADGVTARLAELLQSAQQDSHRPLKKPIPKPRTKMQPQLQRRMSETYV CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCC >Mature Secondary Structure MNPSIDSYTPSVSATHPQGQAIRQIAYLRKVAGEDAQALITRQHHDVGGRTVTERDPRLS CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEECCCCCCCE IASQVTVFALSGQPLRVQSVDAGTSLVLPGRSGEETRRWDARGNHWLTTYDNQLRPLTVE EECEEEEEEECCCCEEEEEECCCCEEEECCCCCCHHHHHCCCCCEEEEECCCCCCEEEEC ENGTPDIETFTYADRSADPGHNLRGQLIRREDPSGSVDVRSFGLSGQALRETRTFHDGNA CCCCCCCEEEEECCCCCCCCCCCCCCEEECCCCCCCEEEEEECCCCHHHHHHHCCCCCCE FVSGRRYSPLGAVLTQTDAGGHQQQSTYDVAGQLNRVQLQINGQTTWQTVLQDAQYNASG EECCCCCCCHHHHEEECCCCCCCCCCHHHHHCCCEEEEEEECCCHHHHHHHHHCCCCCCC QLIEQQAGNGVTSHWHYRAADGRLHCHRAQKGSGPVLQDFKYEYDRVGNIVRILDHAYTP HHHHHHCCCCCCCCCEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC TYFSNQRVDGHQEFDYDTLYRLISATGYSDAPPSDRLGLPQSTNPDDRRNYVEHYDYDHG CCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCC DNLVKTIHVRDGTSHTFEMCIDPASNRGVRWKPGDPPPDFSQRFDPAGNLRALQPGVPMH CCEEEEEEEECCCCCEEEEEECCCCCCCEECCCCCCCCCHHHCCCCCCCCEEECCCCCEE WNAHGELDKVTLVDRNGSSANDEEYYRYSRGQRVYKRHDTHTTKVSHFHEVRYLPGLEIR ECCCCCCEEEEEEECCCCCCCCHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHCCCCCEEE TKDNGEELHVITLDIGSGAARCLHWKKDPAKIGADQLRFTLPDHLGSAVRELDAQARLIT ECCCCCEEEEEEEECCCCCHHHEECCCCHHHCCHHHEEEECCHHHHHHHHHHHHHHEEEE DERYLPFGGTAVYTRHSAVEVDYKTVRYSGKEMDVTRLYYYGARYYADWLGRWVSADRAG CCCCCCCCCCEEEEECCEEEEEHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC TVDGLNLYAFVGNNPIIHVDKTGNVKVLFDVAKGFIGVLDKAATAAGQLDYLAREFDGLV CCCCCEEEEEECCCCEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PEDADINELRESITFGTFMKSRHGIKSALYGAAKGAGVGAVLGTALPGIGNLIGTAVGTL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHH VGAIAFPLLRYHFFKKSLKAVETLRTREIAAGVTAVADTAANVVEGTKNLINGAGELQQR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH IKAAADNLGSYPQRLQEMFYRQLDDLMGDQQREVMKLLKTGLDPFDAIDQVLSTARQLVD HHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHC SPSEADGVTARLAELLQSAQQDSHRPLKKPIPKPRTKMQPQLQRRMSETYV CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA