| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is ybaN [C]
Identifier: 77460602
GI number: 77460602
Start: 4937592
End: 4937987
Strand: Direct
Name: ybaN [C]
Synonym: Pfl01_4381
Alternate gene names: 77460602
Gene position: 4937592-4937987 (Clockwise)
Preceding gene: 77460601
Following gene: 77460603
Centisome position: 76.69
GC content: 64.65
Gene sequence:
>396_bases ATGCCCCAACCCGCCGCCTCCCGACTCGCCCGCCTGCTGTTCGGCCTGCTCGCCTATGTCAGCCTCGGCATCGGCCTGAT CGCCATCGTCGTGCCCGGCCTGCCGACCACCGAGTTCATCCTGCTCGCTGCCTGGGCCGCGACCCGCAGTTCGCCGCGCC TGAGTGCCTGGCTGGAAAACCATCGTCTGTTCGGCCCGATCCTGAGCAACTGGCGCAACGGCAAGATCATCGCCCGCAAG GCCAAGGTCAGCGCCACGGTCAGCATGTTGCTGTGCGCCACGCTGATGCTGGTGATGCTCGATCACGGCTGGCCGATCTA TCTGGCGATTGTGGGGATGACGATGGGCAACCTGTGGATCTGGTCACGACCGGAAGCGTTGCCGAAAATTTCCTGA
Upstream 100 bases:
>100_bases CCGGCCTGATTGCTTAATTCCTGTGGAAGCCTGGCTTCCACAGGGAACTGCATAAGCCTGTAAGATTCCCATCCCGCTTC ATAAGTCTCTCGCTGAGCCC
Downstream 100 bases:
>100_bases TTTTCCCCTTGTTTTCAGGGTATTTACCCGCGCAAACGTTTAGCCGCGACCGCTCGTCGGCTTGTGATTCATGCCTGTCC GCCCCGCGCCGATGAGCATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 131; Mature: 130
Protein sequence:
>131_residues MPQPAASRLARLLFGLLAYVSLGIGLIAIVVPGLPTTEFILLAAWAATRSSPRLSAWLENHRLFGPILSNWRNGKIIARK AKVSATVSMLLCATLMLVMLDHGWPIYLAIVGMTMGNLWIWSRPEALPKIS
Sequences:
>Translated_131_residues MPQPAASRLARLLFGLLAYVSLGIGLIAIVVPGLPTTEFILLAAWAATRSSPRLSAWLENHRLFGPILSNWRNGKIIARK AKVSATVSMLLCATLMLVMLDHGWPIYLAIVGMTMGNLWIWSRPEALPKIS >Mature_130_residues PQPAASRLARLLFGLLAYVSLGIGLIAIVVPGLPTTEFILLAAWAATRSSPRLSAWLENHRLFGPILSNWRNGKIIARKA KVSATVSMLLCATLMLVMLDHGWPIYLAIVGMTMGNLWIWSRPEALPKIS
Specific function: Unknown
COG id: COG2832
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786674, Length=116, Percent_Identity=31.8965517241379, Blast_Score=63, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14348; Mature: 14216
Theoretical pI: Translated: 11.51; Mature: 11.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQPAASRLARLLFGLLAYVSLGIGLIAIVVPGLPTTEFILLAAWAATRSSPRLSAWLEN CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHC HRLFGPILSNWRNGKIIARKAKVSATVSMLLCATLMLVMLDHGWPIYLAIVGMTMGNLWI CCCHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCEEE WSRPEALPKIS ECCCCCCCCCC >Mature Secondary Structure PQPAASRLARLLFGLLAYVSLGIGLIAIVVPGLPTTEFILLAAWAATRSSPRLSAWLEN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHC HRLFGPILSNWRNGKIIARKAKVSATVSMLLCATLMLVMLDHGWPIYLAIVGMTMGNLWI CCCHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCEEE WSRPEALPKIS ECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA