| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77460404
Identifier: 77460404
GI number: 77460404
Start: 4719782
End: 4720516
Strand: Reverse
Name: 77460404
Synonym: Pfl01_4183
Alternate gene names: NA
Gene position: 4720516-4719782 (Counterclockwise)
Preceding gene: 77460407
Following gene: 77460403
Centisome position: 73.32
GC content: 58.37
Gene sequence:
>735_bases ATGTTTGGCCGAAACGTCGTTATCTCTGTGCTGAACCTCTCGCTAGACTCGGGGCTCAATCAGGAGAATGTCGTCATGCA CGAGTATCTGAGCCCCGGCCGCTTCATCGATAGTGACCACCCCTCGGTGGTGGAGTTCGCCGAGCAGCACCGTGGTGCCA GTCGCGATCCGCTCGCGCAGGCGATCAGTCTTTATTACGCGGTGCGCGAGGCGGTGCGTTACAACATGTACACCTTCAGC CGCGACCCGCAGACCTTGCGCGGCAGCTACGCGCTGGCGGCGGGTGAGAGTTATTGCGTGCCCAAGGCCACGTTGCTCGC CGGTTGCGCGCGCCATTGCGGGATCCCCGCGCGCATCGGCCTGGCGGATGTGAAAAATCATCTGTCGACGCCGCGTCTGC TTGAACTGCTGAGAAGCGAAGTGTTCGCCATGCATGGTTATACCGAGCTTTTTCTCAATGATCGCTGGGTCAAAGCCACA CCCGCGTTCAACCAGAAGCTCTGCGAAATGTTCAACGTTGCACCGCTGGAATTCGACGGCATGAACGACAGCGTTTTCCA CCCGTACAACAGCGATGGCGCGCTGCTGATGGAGTACCTCGTCGATCACGGCCAGTTCGCTGATGTACCGGAATCTTTTT TCTTCGAGCATCTGCAGAAATGTTATCCGCACCTGTTCAACGATCAGCAGACGCCCCTGTCCAGTGACATGCGTGGTGAT GTCGGCCGCTTCTGA
Upstream 100 bases:
>100_bases AGCAAGGTGATTGAAATCGTGGGAAACCCCGGATGTCTTTTGTAGGTTCGGTGGGCAACACGCGTGGGAAATCGTTCGCA GCTTCCGCGTCTTTACGTGC
Downstream 100 bases:
>100_bases TCCGGCGTATGCTGCCTGCCCATTTACTGGAAAAGAGGCGGACATGCTGAAGATCTGGGGTCGCAAGAATTCGTCGAATG TCAGAAAACCGTTGTGGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: Transglutaminase Domain-Containing Protein; Transglutaminase-Like; Transglutaminase-Like S Cysteine Protease-Like Protein; Transglutaminase-Like Cysteine Protease
Number of amino acids: Translated: 244; Mature: 244
Protein sequence:
>244_residues MFGRNVVISVLNLSLDSGLNQENVVMHEYLSPGRFIDSDHPSVVEFAEQHRGASRDPLAQAISLYYAVREAVRYNMYTFS RDPQTLRGSYALAAGESYCVPKATLLAGCARHCGIPARIGLADVKNHLSTPRLLELLRSEVFAMHGYTELFLNDRWVKAT PAFNQKLCEMFNVAPLEFDGMNDSVFHPYNSDGALLMEYLVDHGQFADVPESFFFEHLQKCYPHLFNDQQTPLSSDMRGD VGRF
Sequences:
>Translated_244_residues MFGRNVVISVLNLSLDSGLNQENVVMHEYLSPGRFIDSDHPSVVEFAEQHRGASRDPLAQAISLYYAVREAVRYNMYTFS RDPQTLRGSYALAAGESYCVPKATLLAGCARHCGIPARIGLADVKNHLSTPRLLELLRSEVFAMHGYTELFLNDRWVKAT PAFNQKLCEMFNVAPLEFDGMNDSVFHPYNSDGALLMEYLVDHGQFADVPESFFFEHLQKCYPHLFNDQQTPLSSDMRGD VGRF >Mature_244_residues MFGRNVVISVLNLSLDSGLNQENVVMHEYLSPGRFIDSDHPSVVEFAEQHRGASRDPLAQAISLYYAVREAVRYNMYTFS RDPQTLRGSYALAAGESYCVPKATLLAGCARHCGIPARIGLADVKNHLSTPRLLELLRSEVFAMHGYTELFLNDRWVKAT PAFNQKLCEMFNVAPLEFDGMNDSVFHPYNSDGALLMEYLVDHGQFADVPESFFFEHLQKCYPHLFNDQQTPLSSDMRGD VGRF
Specific function: Unknown
COG id: COG1305
COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27551; Mature: 27551
Theoretical pI: Translated: 5.75; Mature: 5.75
Prosite motif: PS00549 BACTERIOFERRITIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFGRNVVISVLNLSLDSGLNQENVVMHEYLSPGRFIDSDHPSVVEFAEQHRGASRDPLAQ CCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHH AISLYYAVREAVRYNMYTFSRDPQTLRGSYALAAGESYCVPKATLLAGCARHCGIPARIG HHHHHHHHHHHHHHHHHEECCCCHHHCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCCC LADVKNHLSTPRLLELLRSEVFAMHGYTELFLNDRWVKATPAFNQKLCEMFNVAPLEFDG HHHHHHHCCCHHHHHHHHHHHHHHCCHHHHEECCCEEECCCHHHHHHHHHHCCCCCEECC MNDSVFHPYNSDGALLMEYLVDHGQFADVPESFFFEHLQKCYPHLFNDQQTPLSSDMRGD CCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC VGRF CCCC >Mature Secondary Structure MFGRNVVISVLNLSLDSGLNQENVVMHEYLSPGRFIDSDHPSVVEFAEQHRGASRDPLAQ CCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHH AISLYYAVREAVRYNMYTFSRDPQTLRGSYALAAGESYCVPKATLLAGCARHCGIPARIG HHHHHHHHHHHHHHHHHEECCCCHHHCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCCC LADVKNHLSTPRLLELLRSEVFAMHGYTELFLNDRWVKATPAFNQKLCEMFNVAPLEFDG HHHHHHHCCCHHHHHHHHHHHHHHCCHHHHEECCCEEECCCHHHHHHHHHHCCCCCEECC MNDSVFHPYNSDGALLMEYLVDHGQFADVPESFFFEHLQKCYPHLFNDQQTPLSSDMRGD CCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC VGRF CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA