Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

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The map label for this gene is yliJ [H]

Identifier: 77460403

GI number: 77460403

Start: 4719115

End: 4719798

Strand: Reverse

Name: yliJ [H]

Synonym: Pfl01_4182

Alternate gene names: 77460403

Gene position: 4719798-4719115 (Counterclockwise)

Preceding gene: 77460404

Following gene: 77460402

Centisome position: 73.31

GC content: 60.67

Gene sequence:

>684_bases
ATGTCGGCCGCTTCTGATCCGGCGTATGCTGCCTGCCCATTTACTGGAAAAGAGGCGGACATGCTGAAGATCTGGGGTCG
CAAGAATTCGTCGAATGTCAGAAAACCGTTGTGGGCGGCCGAAGAGCTCGGGCTGGCCTACGAGGCCATCGATGCCGGTG
GCGCGTTTGGTGTGGTCGACACGCCGGAGTATCGGGCGATGAACCCGAACGGGCGGGTGCCGGTGATTCAGGACGACGGT
TTCGTGTTGTGGGAATCGAATGCCATCGTGCGTTACCTGCTGGCAAAACATGCGGCCGATACCTCGTGGTACCCGGCGGA
TCCGCAGACCCGCGCCACCGCCGACAAGTGGATGGACTGGACGACTTCCAGTTTCGCAGGGCCGTTTCGCACGGTGTTCT
GGGGCGTTTTGCGTACCCCGGCAGACAAGCAGGACTGGCCGGCAATCCATGCGGCGATCAAGGAGTGCGACAGCTTGCTG
GCGATGGCCGATCAGGCGCTGAAGCACCAGCCTTATCTGTCCGGGAGTGAAATCGGCATGGGCGATATCCCGCTCGGCAG
TTTCATTTATGCCTGGTTCGAGATGCCGATCGAACGCGCGCCACAGCCCAATCTCGAAGCCTGGTACGCGCGGTTGAAGC
AGCGTCCGGCGTATCAGAAAGCCGTCATGACCGCGTTGACTTAA

Upstream 100 bases:

>100_bases
GCTGATGTACCGGAATCTTTTTTCTTCGAGCATCTGCAGAAATGTTATCCGCACCTGTTCAACGATCAGCAGACGCCCCT
GTCCAGTGACATGCGTGGTG

Downstream 100 bases:

>100_bases
TACCTACTATCGACACACTTGACTGTACTTGTGCGGCGACGGCAAGCACCATTGCGCTCGAGCGCTGCGGTTGTCTTCCT
CGCCGCCGGCTTTTTATCAG

Product: glutathione S-transferase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 226

Protein sequence:

>227_residues
MSAASDPAYAACPFTGKEADMLKIWGRKNSSNVRKPLWAAEELGLAYEAIDAGGAFGVVDTPEYRAMNPNGRVPVIQDDG
FVLWESNAIVRYLLAKHAADTSWYPADPQTRATADKWMDWTTSSFAGPFRTVFWGVLRTPADKQDWPAIHAAIKECDSLL
AMADQALKHQPYLSGSEIGMGDIPLGSFIYAWFEMPIERAPQPNLEAWYARLKQRPAYQKAVMTALT

Sequences:

>Translated_227_residues
MSAASDPAYAACPFTGKEADMLKIWGRKNSSNVRKPLWAAEELGLAYEAIDAGGAFGVVDTPEYRAMNPNGRVPVIQDDG
FVLWESNAIVRYLLAKHAADTSWYPADPQTRATADKWMDWTTSSFAGPFRTVFWGVLRTPADKQDWPAIHAAIKECDSLL
AMADQALKHQPYLSGSEIGMGDIPLGSFIYAWFEMPIERAPQPNLEAWYARLKQRPAYQKAVMTALT
>Mature_226_residues
SAASDPAYAACPFTGKEADMLKIWGRKNSSNVRKPLWAAEELGLAYEAIDAGGAFGVVDTPEYRAMNPNGRVPVIQDDGF
VLWESNAIVRYLLAKHAADTSWYPADPQTRATADKWMDWTTSSFAGPFRTVFWGVLRTPADKQDWPAIHAAIKECDSLLA
MADQALKHQPYLSGSEIGMGDIPLGSFIYAWFEMPIERAPQPNLEAWYARLKQRPAYQKAVMTALT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GST N-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI4504187, Length=170, Percent_Identity=27.0588235294118, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI124249394, Length=170, Percent_Identity=27.0588235294118, Blast_Score=66, Evalue=3e-11,
Organism=Escherichia coli, GI87081789, Length=209, Percent_Identity=44.9760765550239, Blast_Score=180, Evalue=5e-47,
Organism=Escherichia coli, GI1788640, Length=193, Percent_Identity=28.4974093264249, Blast_Score=61, Evalue=5e-11,
Organism=Drosophila melanogaster, GI19922532, Length=208, Percent_Identity=29.8076923076923, Blast_Score=93, Evalue=2e-19,
Organism=Drosophila melanogaster, GI17864598, Length=153, Percent_Identity=30.718954248366, Blast_Score=90, Evalue=1e-18,
Organism=Drosophila melanogaster, GI17864594, Length=187, Percent_Identity=27.807486631016, Blast_Score=89, Evalue=2e-18,
Organism=Drosophila melanogaster, GI19922526, Length=203, Percent_Identity=29.064039408867, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24654983, Length=207, Percent_Identity=28.9855072463768, Blast_Score=82, Evalue=2e-16,
Organism=Drosophila melanogaster, GI17864596, Length=188, Percent_Identity=22.8723404255319, Blast_Score=82, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24654975, Length=205, Percent_Identity=26.8292682926829, Blast_Score=80, Evalue=9e-16,
Organism=Drosophila melanogaster, GI24654965, Length=207, Percent_Identity=26.0869565217391, Blast_Score=79, Evalue=2e-15,
Organism=Drosophila melanogaster, GI20130115, Length=205, Percent_Identity=25.3658536585366, Blast_Score=78, Evalue=6e-15,
Organism=Drosophila melanogaster, GI17864592, Length=181, Percent_Identity=24.8618784530387, Blast_Score=78, Evalue=6e-15,
Organism=Drosophila melanogaster, GI45549270, Length=155, Percent_Identity=25.1612903225806, Blast_Score=77, Evalue=7e-15,
Organism=Drosophila melanogaster, GI24646251, Length=194, Percent_Identity=28.3505154639175, Blast_Score=77, Evalue=7e-15,
Organism=Drosophila melanogaster, GI24654992, Length=205, Percent_Identity=24.8780487804878, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI17933730, Length=175, Percent_Identity=27.4285714285714, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24646249, Length=200, Percent_Identity=24.5, Blast_Score=75, Evalue=5e-14,
Organism=Drosophila melanogaster, GI19922528, Length=214, Percent_Identity=26.6355140186916, Blast_Score=74, Evalue=9e-14,
Organism=Drosophila melanogaster, GI24654996, Length=205, Percent_Identity=28.2926829268293, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI85725204, Length=196, Percent_Identity=25, Blast_Score=73, Evalue=1e-13,
Organism=Drosophila melanogaster, GI17737923, Length=196, Percent_Identity=25, Blast_Score=73, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24654979, Length=207, Percent_Identity=24.1545893719807, Blast_Score=69, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010987
- InterPro:   IPR004045
- InterPro:   IPR017933
- InterPro:   IPR004046
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00043 GST_C; PF02798 GST_N [H]

EC number: NA

Molecular weight: Translated: 25206; Mature: 25075

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAASDPAYAACPFTGKEADMLKIWGRKNSSNVRKPLWAAEELGLAYEAIDAGGAFGVVD
CCCCCCCCEEECCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHCHHHHHHCCCCCCCCCC
TPEYRAMNPNGRVPVIQDDGFVLWESNAIVRYLLAKHAADTSWYPADPQTRATADKWMDW
CCCCEEECCCCCEEEEECCCEEEEECCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCC
TTSSFAGPFRTVFWGVLRTPADKQDWPAIHAAIKECDSLLAMADQALKHQPYLSGSEIGM
CHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
GDIPLGSFIYAWFEMPIERAPQPNLEAWYARLKQRPAYQKAVMTALT
CCCCHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHCCHHHHHHHHHCC
>Mature Secondary Structure 
SAASDPAYAACPFTGKEADMLKIWGRKNSSNVRKPLWAAEELGLAYEAIDAGGAFGVVD
CCCCCCCEEECCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHCHHHHHHCCCCCCCCCC
TPEYRAMNPNGRVPVIQDDGFVLWESNAIVRYLLAKHAADTSWYPADPQTRATADKWMDW
CCCCEEECCCCCEEEEECCCEEEEECCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCC
TTSSFAGPFRTVFWGVLRTPADKQDWPAIHAAIKECDSLLAMADQALKHQPYLSGSEIGM
CHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
GDIPLGSFIYAWFEMPIERAPQPNLEAWYARLKQRPAYQKAVMTALT
CCCCHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]