| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is 77460113
Identifier: 77460113
GI number: 77460113
Start: 4403415
End: 4403903
Strand: Reverse
Name: 77460113
Synonym: Pfl01_3892
Alternate gene names: NA
Gene position: 4403903-4403415 (Counterclockwise)
Preceding gene: 77460116
Following gene: 77460112
Centisome position: 68.4
GC content: 61.15
Gene sequence:
>489_bases ATGAAACCAGTACCCAACAGCTTTGAACGCAAGATCATGCTCAGGTCGCCGCGCTCCCATGTCTGGCGCGCCCTGGTCGA TGCCGAGGCGTTCGGCCAGTGGTTCGGCGTTGCGCTGGAGGGCCGGCGGTTTATCGCCGGCGAATGGACGCAGGGGCAGG TCACTTACCCCGGTTATGAACATGTGCTCTGGAACGTGCTGGTGGAGCGGGTCGAGCCGCAGCAGCTGTTCTCATTTCGC TGGCACCCGTACGCGGTGAACCCGAAAATCGACTACTCCCAGGAACCGACCACGCTGGTCAAATTCGAACTGCAGGACTA CGAGAACGGCACGCTGCTGAAGGTCTCCGAATCAGGCTTTGCGCACATCCCCGACGTGCGCCAGAAAGAGGCCTACTACA TGGACAGTCGGGGCTGGGAGGAACAGTTGAGTCGACTTGAGCACTTCCTCACGGAGAGCGACCGGGCCCGTGAGCGTGAA GGTGGCTGA
Upstream 100 bases:
>100_bases CCGGATATTTCAATCAGAGCCGACCTTTGCACTGGATTGATACAACTTCGGATTGGACATGTGGTCATACAAGCCTACTG TTCAAAACAGGAGGTGACGT
Downstream 100 bases:
>100_bases TCTCGACCTGTTCGCGCCGTGGCTGGGACGCTGGGCGCTGGCGCCGGACGGCGAGCCGATCATCACCCCGGGCAGCCGCC TGTTGCCGGTGCGTCAGGAC
Product: hypothetical protein
Products: NA
Alternate protein names: Aha1 Domain-Containing Protein; Periplasmic Protein ThiolDisulfide Oxidoreductase DsbE
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MKPVPNSFERKIMLRSPRSHVWRALVDAEAFGQWFGVALEGRRFIAGEWTQGQVTYPGYEHVLWNVLVERVEPQQLFSFR WHPYAVNPKIDYSQEPTTLVKFELQDYENGTLLKVSESGFAHIPDVRQKEAYYMDSRGWEEQLSRLEHFLTESDRARERE GG
Sequences:
>Translated_162_residues MKPVPNSFERKIMLRSPRSHVWRALVDAEAFGQWFGVALEGRRFIAGEWTQGQVTYPGYEHVLWNVLVERVEPQQLFSFR WHPYAVNPKIDYSQEPTTLVKFELQDYENGTLLKVSESGFAHIPDVRQKEAYYMDSRGWEEQLSRLEHFLTESDRARERE GG >Mature_162_residues MKPVPNSFERKIMLRSPRSHVWRALVDAEAFGQWFGVALEGRRFIAGEWTQGQVTYPGYEHVLWNVLVERVEPQQLFSFR WHPYAVNPKIDYSQEPTTLVKFELQDYENGTLLKVSESGFAHIPDVRQKEAYYMDSRGWEEQLSRLEHFLTESDRARERE GG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19093; Mature: 19093
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPVPNSFERKIMLRSPRSHVWRALVDAEAFGQWFGVALEGRRFIAGEWTQGQVTYPGYE CCCCCCCHHHEEEEECCHHHHHHHHHHHHHHHHHHCEEECCCEEEECCCCCCCEECCCHH HVLWNVLVERVEPQQLFSFRWHPYAVNPKIDYSQEPTTLVKFELQDYENGTLLKVSESGF HHHHHHHHHHCCHHHHHHCCCCCEEECCCCCCCCCCCEEEEEEECCCCCCCEEEECCCCC AHIPDVRQKEAYYMDSRGWEEQLSRLEHFLTESDRAREREGG EECCCCCCCCCEECCCCCHHHHHHHHHHHHCCCHHHHCCCCC >Mature Secondary Structure MKPVPNSFERKIMLRSPRSHVWRALVDAEAFGQWFGVALEGRRFIAGEWTQGQVTYPGYE CCCCCCCHHHEEEEECCHHHHHHHHHHHHHHHHHHCEEECCCEEEECCCCCCCEECCCHH HVLWNVLVERVEPQQLFSFRWHPYAVNPKIDYSQEPTTLVKFELQDYENGTLLKVSESGF HHHHHHHHHHCCHHHHHHCCCCCEEECCCCCCCCCCCEEEEEEECCCCCCCEEEECCCCC AHIPDVRQKEAYYMDSRGWEEQLSRLEHFLTESDRAREREGG EECCCCCCCCCEECCCCCHHHHHHHHHHHHCCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA