| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is str [H]
Identifier: 77460112
GI number: 77460112
Start: 4402607
End: 4403422
Strand: Reverse
Name: str [H]
Synonym: Pfl01_3891
Alternate gene names: 77460112
Gene position: 4403422-4402607 (Counterclockwise)
Preceding gene: 77460113
Following gene: 255961266
Centisome position: 68.39
GC content: 64.95
Gene sequence:
>816_bases GTGGCTGATCTCGACCTGTTCGCGCCGTGGCTGGGACGCTGGGCGCTGGCGCCGGACGGCGAGCCGATCATCACCCCGGG CAGCCGCCTGTTGCCGGTGCGTCAGGACGATACTCCGGCGATGCTGAAAGTCGCGGTGGACGACGAAGAAAAGTACGGCA ACCTGCTGATGACCTGGTGGGACGGCGACGGCGCCGCCCGGGTGCTTGCCCATCACGACGAAGGCCTGTTGCTGGAGCGG GCGATGGGCCAGCGTTCGTTGATGCACATGGCGCTCAACGGCGAGGACGACGAGGCCTCGCGGATCATGTGCCGATCCTT GGCCCGGCTGCACGCACCGCGTCTGACGCCGCCACCGCCGTTGGTGGAACTCGCGCCGTGGTTCGCATCATTACGAGTGG CGGCGACCCGATACGGCGGCCAATACGCCGAATGCCTGCAAACCGCCCAGACCTTGCTTGCCGAGCCGCATGACGTAGTG GTGCTGCACGGCGACATGCACCACGACAACGTCCTCGATTTCGGCCCACGGGGCTGGCTGGCCATCGACCCCAAGCGGGT GCAGGGCGAGCGCGGTTATGACTACGCCAACCTGATCTGCAACCCGGAATTGCAGACGGCCACCGATCCGGAGCGCTTTC GGCACCAAGTCAATGTGATCTGCGAAGCAGCGGCAATTGAACGCAAGCGCCTGCTGCAATGGGTACTGGCCTTCGCCGGA CTGTCTGCCGCGTGGTTCATGGAAGATGACGAGCGAAAAGCCGCCAACGGACAGCTGAAAGTCGCGCAACTGGCGGCTTC TGCACTTGATGCCTGA
Upstream 100 bases:
>100_bases CAGAAAGAGGCCTACTACATGGACAGTCGGGGCTGGGAGGAACAGTTGAGTCGACTTGAGCACTTCCTCACGGAGAGCGA CCGGGCCCGTGAGCGTGAAG
Downstream 100 bases:
>100_bases CACGCCTAAGGGTTTTCGGAAGGCCTGCTATGGCGAATGTCTTACACGCGCTGGTAGCTTTTTCGACTATTGCCGATTGG ATCCAGAGCGTAATCTAGCC
Product: aminoglycoside/hydroxyurea antibiotic resistance kinase
Products: NA
Alternate protein names: Streptomycin 3''-phosphotransferase; SPH [H]
Number of amino acids: Translated: 271; Mature: 270
Protein sequence:
>271_residues MADLDLFAPWLGRWALAPDGEPIITPGSRLLPVRQDDTPAMLKVAVDDEEKYGNLLMTWWDGDGAARVLAHHDEGLLLER AMGQRSLMHMALNGEDDEASRIMCRSLARLHAPRLTPPPPLVELAPWFASLRVAATRYGGQYAECLQTAQTLLAEPHDVV VLHGDMHHDNVLDFGPRGWLAIDPKRVQGERGYDYANLICNPELQTATDPERFRHQVNVICEAAAIERKRLLQWVLAFAG LSAAWFMEDDERKAANGQLKVAQLAASALDA
Sequences:
>Translated_271_residues MADLDLFAPWLGRWALAPDGEPIITPGSRLLPVRQDDTPAMLKVAVDDEEKYGNLLMTWWDGDGAARVLAHHDEGLLLER AMGQRSLMHMALNGEDDEASRIMCRSLARLHAPRLTPPPPLVELAPWFASLRVAATRYGGQYAECLQTAQTLLAEPHDVV VLHGDMHHDNVLDFGPRGWLAIDPKRVQGERGYDYANLICNPELQTATDPERFRHQVNVICEAAAIERKRLLQWVLAFAG LSAAWFMEDDERKAANGQLKVAQLAASALDA >Mature_270_residues ADLDLFAPWLGRWALAPDGEPIITPGSRLLPVRQDDTPAMLKVAVDDEEKYGNLLMTWWDGDGAARVLAHHDEGLLLERA MGQRSLMHMALNGEDDEASRIMCRSLARLHAPRLTPPPPLVELAPWFASLRVAATRYGGQYAECLQTAQTLLAEPHDVVV LHGDMHHDNVLDFGPRGWLAIDPKRVQGERGYDYANLICNPELQTATDPERFRHQVNVICEAAAIERKRLLQWVLAFAGL SAAWFMEDDERKAANGQLKVAQLAASALDA
Specific function: The aminoglycoside phosphotransferases achieve inactivation of their antibiotic substrates by phosphorylation [H]
COG id: COG3570
COG function: function code V; Streptomycin 6-kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aminoglycoside phosphotransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006748 [H]
Pfam domain/function: PF04655 APH_6_hur [H]
EC number: =2.7.1.87 [H]
Molecular weight: Translated: 30114; Mature: 29982
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADLDLFAPWLGRWALAPDGEPIITPGSRLLPVRQDDTPAMLKVAVDDEEKYGNLLMTWW CCCHHHHHHHHCCEEECCCCCEEECCCCCEEEECCCCCCEEEEEEECCCCCCCCEEEEEE DGDGAARVLAHHDEGLLLERAMGQRSLMHMALNGEDDEASRIMCRSLARLHAPRLTPPPP CCCCEEEEEEECCCCHHHHHHHCHHHHEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCC LVELAPWFASLRVAATRYGGQYAECLQTAQTLLAEPHDVVVLHGDMHHDNVLDFGPRGWL HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCE AIDPKRVQGERGYDYANLICNPELQTATDPERFRHQVNVICEAAAIERKRLLQWVLAFAG EECHHHHCCCCCCCHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC LSAAWFMEDDERKAANGQLKVAQLAASALDA CCEEEEECCCCHHHCCCCCHHHHHHHHHHCC >Mature Secondary Structure ADLDLFAPWLGRWALAPDGEPIITPGSRLLPVRQDDTPAMLKVAVDDEEKYGNLLMTWW CCHHHHHHHHCCEEECCCCCEEECCCCCEEEECCCCCCEEEEEEECCCCCCCCEEEEEE DGDGAARVLAHHDEGLLLERAMGQRSLMHMALNGEDDEASRIMCRSLARLHAPRLTPPPP CCCCEEEEEEECCCCHHHHHHHCHHHHEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCC LVELAPWFASLRVAATRYGGQYAECLQTAQTLLAEPHDVVVLHGDMHHDNVLDFGPRGWL HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCE AIDPKRVQGERGYDYANLICNPELQTATDPERFRHQVNVICEAAAIERKRLLQWVLAFAG EECHHHHCCCCCCCHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC LSAAWFMEDDERKAANGQLKVAQLAASALDA CCEEEEECCCCHHHCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3889831 [H]