| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77460047
Identifier: 77460047
GI number: 77460047
Start: 4325356
End: 4325784
Strand: Direct
Name: 77460047
Synonym: Pfl01_3825
Alternate gene names: NA
Gene position: 4325356-4325784 (Clockwise)
Preceding gene: 77460046
Following gene: 77460049
Centisome position: 67.18
GC content: 52.45
Gene sequence:
>429_bases ATGAGCGTTGCCCGGTGTTTTGCTGTACTGACAGGATGTCTTTTGGTTATGCCCGCGTTCATCTGTGTTTTATTCAAGCG TTTCACCCTCCTCGCTTTACTCTCGACTCTCTCTGCAAGCGCCTATGCATCCTGTGATTTTTTGAAGGGCTGCGGTGAGG GGGGAGATGGCCCTTTTCAATCTACCCAGATGTCTGGTTTTCTGGTTTTCACGACGACGATGGTCACAGTCGACGGGATG TCGGACATTTCCGGACTGAAAAAACGTGTGTATTCGGTAGAGGAAATAGAAGCGGCACGTTATTTCCTCGCCAGTGACGG CATGCTGCAAGCCGCGTATTTCACCTCGGCGTTGCAGCGGTTTCGTCAGGACTCGCCCGACTCTGAATTGAATGACCTCG CCGTCGCTGCGCTGATCAGCAGTCAGTGA
Upstream 100 bases:
>100_bases GGTGGATATCCACAAGGCCAAGGATCCGCTGGCGTTGCTGGATCAGGCGGCGGAGTTGCTGGCCGGGCGTTGATCGACGC TTGGAGCGTGTGGGCAACGA
Downstream 100 bases:
>100_bases TCAAGCGGCTGCGGCCGCCGTCCAGTTGACCCAACCAAATTGCCACGTGGCAAGGATCAGCAAGCCGAAGGCGATGCGGT ACCAGGCGAAGGTGGCGTAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 142; Mature: 141
Protein sequence:
>142_residues MSVARCFAVLTGCLLVMPAFICVLFKRFTLLALLSTLSASAYASCDFLKGCGEGGDGPFQSTQMSGFLVFTTTMVTVDGM SDISGLKKRVYSVEEIEAARYFLASDGMLQAAYFTSALQRFRQDSPDSELNDLAVAALISSQ
Sequences:
>Translated_142_residues MSVARCFAVLTGCLLVMPAFICVLFKRFTLLALLSTLSASAYASCDFLKGCGEGGDGPFQSTQMSGFLVFTTTMVTVDGM SDISGLKKRVYSVEEIEAARYFLASDGMLQAAYFTSALQRFRQDSPDSELNDLAVAALISSQ >Mature_141_residues SVARCFAVLTGCLLVMPAFICVLFKRFTLLALLSTLSASAYASCDFLKGCGEGGDGPFQSTQMSGFLVFTTTMVTVDGMS DISGLKKRVYSVEEIEAARYFLASDGMLQAAYFTSALQRFRQDSPDSELNDLAVAALISSQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15275; Mature: 15144
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 7.7 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVARCFAVLTGCLLVMPAFICVLFKRFTLLALLSTLSASAYASCDFLKGCGEGGDGPFQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC STQMSGFLVFTTTMVTVDGMSDISGLKKRVYSVEEIEAARYFLASDGMLQAAYFTSALQR CCCCCCCEEHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH FRQDSPDSELNDLAVAALISSQ HHCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure SVARCFAVLTGCLLVMPAFICVLFKRFTLLALLSTLSASAYASCDFLKGCGEGGDGPFQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC STQMSGFLVFTTTMVTVDGMSDISGLKKRVYSVEEIEAARYFLASDGMLQAAYFTSALQR CCCCCCCEEHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH FRQDSPDSELNDLAVAALISSQ HHCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA