| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is yedW [C]
Identifier: 77460049
GI number: 77460049
Start: 4327212
End: 4327865
Strand: Direct
Name: yedW [C]
Synonym: Pfl01_3827
Alternate gene names: 77460049
Gene position: 4327212-4327865 (Clockwise)
Preceding gene: 77460047
Following gene: 77460050
Centisome position: 67.21
GC content: 52.29
Gene sequence:
>654_bases GTGGCTGAACACTTTAGCGCGCTAATCACGAAGCATGTGCAGACTGATCTGGCCATTGAAACTGGCTCTTACGCTAGTTC ATATCAGCCAAATGAATATCACGGCTTGTATCGAGCCATATTCATTGTCATCGACAGCCCTCAGGCTCTTGAAGACAATC TGGCACTGGTGGAAAACCTGCGCAGCGACAACTTGAAGCCGATCATTTGTGCCGTAATCACCGGCCGCGGCGCGTTCAAC AAGATCAAGTATTTTCTGGCGGGTGCCGACTTCTGTCTCAAACTCAATACCTTGTCCGATGAAAGCGCGGAACTGCTGGG TGAGTTCTTCGACAGCGAAGAATGGCAGCGGGATATCAGCCTGGTGCTGGACTCCACCCGCATCTGCCTCTCGGACACCA GCAAGAAACTCGATATCTCCTTTGCCGAAATGAAGATCCTGCAAGCCTTTGCGCAGACCGGCAATCACATTCTCAGCCAT GATGAAATCGCCGGCATCATGGGGCTCAACACCCATTTCTACGACCCTCGGGCGCTGGAAAAATCCATCAGCCGCTTGCG TGGGAAAATCAAGGACGTGTACGGTACGAACGCCATACAGAGCATTCGCGGGTATGGCTATCGTCTGATGAGGGGGTTGA TCTCAACTCCTTGA
Upstream 100 bases:
>100_bases TTCGAGTCAATGCATGATGCTCACAGGTAACTTAGCGACTAGAAGTCCGCGCCGCACAAGCGACGAACCAGGTGTTCTCA CTCTGGGTCGTACCCGTGGC
Downstream 100 bases:
>100_bases TTCAGGGAAAACACTCTTTTGCAGCATACGAGGGAACGTCTGATGCAACGCTTCAAACATCCGCTTTCTCATAGTTTTAA CCGCGTCACATATCTAATAA
Product: response regulator receiver domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 217; Mature: 216
Protein sequence:
>217_residues MAEHFSALITKHVQTDLAIETGSYASSYQPNEYHGLYRAIFIVIDSPQALEDNLALVENLRSDNLKPIICAVITGRGAFN KIKYFLAGADFCLKLNTLSDESAELLGEFFDSEEWQRDISLVLDSTRICLSDTSKKLDISFAEMKILQAFAQTGNHILSH DEIAGIMGLNTHFYDPRALEKSISRLRGKIKDVYGTNAIQSIRGYGYRLMRGLISTP
Sequences:
>Translated_217_residues MAEHFSALITKHVQTDLAIETGSYASSYQPNEYHGLYRAIFIVIDSPQALEDNLALVENLRSDNLKPIICAVITGRGAFN KIKYFLAGADFCLKLNTLSDESAELLGEFFDSEEWQRDISLVLDSTRICLSDTSKKLDISFAEMKILQAFAQTGNHILSH DEIAGIMGLNTHFYDPRALEKSISRLRGKIKDVYGTNAIQSIRGYGYRLMRGLISTP >Mature_216_residues AEHFSALITKHVQTDLAIETGSYASSYQPNEYHGLYRAIFIVIDSPQALEDNLALVENLRSDNLKPIICAVITGRGAFNK IKYFLAGADFCLKLNTLSDESAELLGEFFDSEEWQRDISLVLDSTRICLSDTSKKLDISFAEMKILQAFAQTGNHILSHD EIAGIMGLNTHFYDPRALEKSISRLRGKIKDVYGTNAIQSIRGYGYRLMRGLISTP
Specific function: Probable Member Of A Two-Component Regulatory System Yedw/Yedv. [C]
COG id: COG0745
COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24274; Mature: 24143
Theoretical pI: Translated: 5.94; Mature: 5.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEHFSALITKHVQTDLAIETGSYASSYQPNEYHGLYRAIFIVIDSPQALEDNLALVENL CCHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHEEEEEEEECCCHHHHHHHHHHHHH RSDNLKPIICAVITGRGAFNKIKYFLAGADFCLKLNTLSDESAELLGEFFDSEEWQRDIS CCCCCCEEEEEEEECCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCHHHHHHHH LVLDSTRICLSDTSKKLDISFAEMKILQAFAQTGNHILSHDEIAGIMGLNTHFYDPRALE HHHCCCCEEECCCCCCEEHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCHHHHH KSISRLRGKIKDVYGTNAIQSIRGYGYRLMRGLISTP HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AEHFSALITKHVQTDLAIETGSYASSYQPNEYHGLYRAIFIVIDSPQALEDNLALVENL CHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHEEEEEEEECCCHHHHHHHHHHHHH RSDNLKPIICAVITGRGAFNKIKYFLAGADFCLKLNTLSDESAELLGEFFDSEEWQRDIS CCCCCCEEEEEEEECCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCHHHHHHHH LVLDSTRICLSDTSKKLDISFAEMKILQAFAQTGNHILSHDEIAGIMGLNTHFYDPRALE HHHCCCCEEECCCCCCEEHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCHHHHH KSISRLRGKIKDVYGTNAIQSIRGYGYRLMRGLISTP HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA