| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is fecA [H]
Identifier: 77460006
GI number: 77460006
Start: 4281261
End: 4283684
Strand: Reverse
Name: fecA [H]
Synonym: Pfl01_3784
Alternate gene names: 77460006
Gene position: 4283684-4281261 (Counterclockwise)
Preceding gene: 77460007
Following gene: 77460003
Centisome position: 66.53
GC content: 62.83
Gene sequence:
>2424_bases GTGAAAAACTCCACCGCCAAAAACAATAAATCCCCTTGGTTACCGCTGGCGCTCGCGCTGGCGGTCAACGCCGCCATGCC GATGGCTTTCGCCGCCGAAGCCATTCACATCCGCGCCCAGCCGCTGGGTCAGGCCCTGAGCGAACTGGGTCAGCAAACGT CATTGCAGGTGTTTTTCAGCCCGGACCTGGTCGCCGGCAAACAGGCGCCGGCGGTGGACGGTAACCTTTCTCCGGAGCAG GCCCTGCGCCAATTGCTGCAAGGCAGCGGTCTGGATTATCAGATCAATGAAGGTTCGGTGACCTTGTCCCCAGCCCCGAC TTCCGCCGCCAACGGCCCGCTGGAGTTGGGCGTGACCGACATCAAGGTGGTCGGCGACTGGCTCGGCGACGCCGACGCCG CCGTGGTGCAGAACCACCCCGGCGCGCGCACCGTGATCCGCCGCGAAGCGATGGTCGAGCAGGGCGCTATGAACGTCGGC GACGTGCTGCGCCGCGTGCCGGGCGTGCAGGTGCAGGAAGCCAACGGCACCGGCGGCAGCGACATATCGCTGAACGTCGG CGTACGAGGTTTGACGTCGCGCCTGTCGCCACGCTCCACGGTGTTGATCGACGGCGTGCCGGCTGCATTCGCCCCGTATG GCCAGCCACAACTGTCGATGGCGCCGATTTCTTCCGGCAACCTCGACAGCATCGACGTGGTCCGTGGTGCCGGCTCCGTG CGTTACGGGCCGCAGAACGTCGGCGGTGTGATCAACTTCGTGACCCGCGCGATCCCGGAAAAAACCACCGGTGAAATCGG CACCACCCTCGAAACCTCGCAGCATGGTGGCTGGAAACACATCGACACCGCGTTCCTCGGCGGCACCGCCGACAATGGCA TCGGCATGGCGCTGTTGTATTCGGGCGTCAACGGCAACGGTTACCGCGAGCGCAACAACGGCAACGACATCGACGACGTG ATCCTCAAGACCCACTGGGCGCCGACCGAGCAGGACGATTTCAGCCTCAACTTCCACTACTACGACGCCAGCGCCGACAT GCCCGGTGGCCTGACGCAGAAGCAGTACGACGACAAACCGTTCCAGTCCGACCGCGACTACGACGGCTTCAGCGGCCGCC GCAAGGACGTGTCGTTCAAGTGGATCCGGCAGATCGACGAGCGTACCCAGGCGGAAGTGCTGACCTACTATTCCGACAGC TTTCGCGGCAGCACCATCGCCGCCCGCGATCAGAAAACCCTCAGCTCGTTCCCGCGTTCCTACTACACGCTGGGCATCGA GCCGCGTGTCTCGCGTGTGTTCGACGTCGGCCCGACCACCCAGGAAGTCAGCGTCGGTTACCGTTATCTGAAAGAGGCGA TGCACGAGCAATCGAGCCGTCTGGCGCTGGTCAACAATGTGCCAGTGGTCACCAAGACCTCCGATGGTCATGTGTTCCAG GACCGCACCGGTGGCACCGAGGCCAACTCGGTGTACATCGACAACAAGATCGACGTCGGCAACTGGACCGTGACTCCGGG CATTCGCTTCGAACACATCAGCACCGACTGGCATGATCGCGCCGTGCTCGATACCGCAGGCAAACGCGTGCCGGAAAAAA ACCGCAGCATCGAAAGCAATGAGCCGCTGCCGGCCCTGAGCGTCATGTATCACCTGTCCGATGCGTGGAAGCTGTTCGCC AACTACGAGACATCGTTCGGCAGCCTGCAGTACTTCCAGCTCGGCCAGGGCGGCTCGGGTGACCAGACCGCCAATGGCCT GGAGCCGGAGAAAGCCAAGACCTACGAAATCGGCACGCGCTACAACGATGACGTGTGGGGCGGGGAAGTGACGCTGTTCT ACATCGACTTCGATGACGAGCTGCAATACATCAGCAATGACGTGGGCTGGACCAACCTCGGCGCGACCAAGCACCAGGGT ATCGAAGCGTCGGTGCACTACGACATGGCGGCGCTTGACCCGCGCCTTGATGGCCTGACCGCCAACGCCGGTTTCACTTA CACCCGCGCGACCTACGAAGGCGAGATCCCGGGCTTCAAGGGCCGCGACCTGCCGTTCTACTCGCGTCAGGTGGCGACCG TCGGCCTGCGTTACGACATCAACCGCTGGACCTACAACATCGACGGCTTCGCCCAGTCCAAACAGCGCTCGCCTGGCACC GGCGTGAATGCTGATGGCAGCTTCAATGGCAATTACATCACCGAAGGCACGGCGGACGGGCAGTACGGCGACATTCCGGG CTACGTGACCTGGAACGTGCGCGGCGGCTATGACTTCGGTTCGCAGCTGTCGAACCTGAAGCTCGGCGCCGGGGTGAAAA ACATCTTCGACAAGCAGTACTTCACTCGCTCCAGCGACAACAACTCGGGGATCTACGTGGGCACGCCACGGACGTTCTTC GTGCAGGCCAGCGTCGGTTTCTGA
Upstream 100 bases:
>100_bases AAAATTCAGGTTTTTTTCGAGTTCGTCGTCTTCCTGTTCAACTGCAACTGGTTTGCATTAACAGCCGCACACTCTTGCGA TCCACAGGACTCCGTTCGAC
Downstream 100 bases:
>100_bases TTGGCAGGGCAGGCGGCTGGTGACAGCCGCCTGTTTTTCATTAGGTTTGAACGAGCCAGTTGCCGGTCATCACTGACTGG GCAACGCAAAATCACTAATT
Product: TonB-dependent siderophore receptor
Products: NA
Alternate protein names: Iron(III) dicitrate transport protein fecA [H]
Number of amino acids: Translated: 807; Mature: 807
Protein sequence:
>807_residues MKNSTAKNNKSPWLPLALALAVNAAMPMAFAAEAIHIRAQPLGQALSELGQQTSLQVFFSPDLVAGKQAPAVDGNLSPEQ ALRQLLQGSGLDYQINEGSVTLSPAPTSAANGPLELGVTDIKVVGDWLGDADAAVVQNHPGARTVIRREAMVEQGAMNVG DVLRRVPGVQVQEANGTGGSDISLNVGVRGLTSRLSPRSTVLIDGVPAAFAPYGQPQLSMAPISSGNLDSIDVVRGAGSV RYGPQNVGGVINFVTRAIPEKTTGEIGTTLETSQHGGWKHIDTAFLGGTADNGIGMALLYSGVNGNGYRERNNGNDIDDV ILKTHWAPTEQDDFSLNFHYYDASADMPGGLTQKQYDDKPFQSDRDYDGFSGRRKDVSFKWIRQIDERTQAEVLTYYSDS FRGSTIAARDQKTLSSFPRSYYTLGIEPRVSRVFDVGPTTQEVSVGYRYLKEAMHEQSSRLALVNNVPVVTKTSDGHVFQ DRTGGTEANSVYIDNKIDVGNWTVTPGIRFEHISTDWHDRAVLDTAGKRVPEKNRSIESNEPLPALSVMYHLSDAWKLFA NYETSFGSLQYFQLGQGGSGDQTANGLEPEKAKTYEIGTRYNDDVWGGEVTLFYIDFDDELQYISNDVGWTNLGATKHQG IEASVHYDMAALDPRLDGLTANAGFTYTRATYEGEIPGFKGRDLPFYSRQVATVGLRYDINRWTYNIDGFAQSKQRSPGT GVNADGSFNGNYITEGTADGQYGDIPGYVTWNVRGGYDFGSQLSNLKLGAGVKNIFDKQYFTRSSDNNSGIYVGTPRTFF VQASVGF
Sequences:
>Translated_807_residues MKNSTAKNNKSPWLPLALALAVNAAMPMAFAAEAIHIRAQPLGQALSELGQQTSLQVFFSPDLVAGKQAPAVDGNLSPEQ ALRQLLQGSGLDYQINEGSVTLSPAPTSAANGPLELGVTDIKVVGDWLGDADAAVVQNHPGARTVIRREAMVEQGAMNVG DVLRRVPGVQVQEANGTGGSDISLNVGVRGLTSRLSPRSTVLIDGVPAAFAPYGQPQLSMAPISSGNLDSIDVVRGAGSV RYGPQNVGGVINFVTRAIPEKTTGEIGTTLETSQHGGWKHIDTAFLGGTADNGIGMALLYSGVNGNGYRERNNGNDIDDV ILKTHWAPTEQDDFSLNFHYYDASADMPGGLTQKQYDDKPFQSDRDYDGFSGRRKDVSFKWIRQIDERTQAEVLTYYSDS FRGSTIAARDQKTLSSFPRSYYTLGIEPRVSRVFDVGPTTQEVSVGYRYLKEAMHEQSSRLALVNNVPVVTKTSDGHVFQ DRTGGTEANSVYIDNKIDVGNWTVTPGIRFEHISTDWHDRAVLDTAGKRVPEKNRSIESNEPLPALSVMYHLSDAWKLFA NYETSFGSLQYFQLGQGGSGDQTANGLEPEKAKTYEIGTRYNDDVWGGEVTLFYIDFDDELQYISNDVGWTNLGATKHQG IEASVHYDMAALDPRLDGLTANAGFTYTRATYEGEIPGFKGRDLPFYSRQVATVGLRYDINRWTYNIDGFAQSKQRSPGT GVNADGSFNGNYITEGTADGQYGDIPGYVTWNVRGGYDFGSQLSNLKLGAGVKNIFDKQYFTRSSDNNSGIYVGTPRTFF VQASVGF >Mature_807_residues MKNSTAKNNKSPWLPLALALAVNAAMPMAFAAEAIHIRAQPLGQALSELGQQTSLQVFFSPDLVAGKQAPAVDGNLSPEQ ALRQLLQGSGLDYQINEGSVTLSPAPTSAANGPLELGVTDIKVVGDWLGDADAAVVQNHPGARTVIRREAMVEQGAMNVG DVLRRVPGVQVQEANGTGGSDISLNVGVRGLTSRLSPRSTVLIDGVPAAFAPYGQPQLSMAPISSGNLDSIDVVRGAGSV RYGPQNVGGVINFVTRAIPEKTTGEIGTTLETSQHGGWKHIDTAFLGGTADNGIGMALLYSGVNGNGYRERNNGNDIDDV ILKTHWAPTEQDDFSLNFHYYDASADMPGGLTQKQYDDKPFQSDRDYDGFSGRRKDVSFKWIRQIDERTQAEVLTYYSDS FRGSTIAARDQKTLSSFPRSYYTLGIEPRVSRVFDVGPTTQEVSVGYRYLKEAMHEQSSRLALVNNVPVVTKTSDGHVFQ DRTGGTEANSVYIDNKIDVGNWTVTPGIRFEHISTDWHDRAVLDTAGKRVPEKNRSIESNEPLPALSVMYHLSDAWKLFA NYETSFGSLQYFQLGQGGSGDQTANGLEPEKAKTYEIGTRYNDDVWGGEVTLFYIDFDDELQYISNDVGWTNLGATKHQG IEASVHYDMAALDPRLDGLTANAGFTYTRATYEGEIPGFKGRDLPFYSRQVATVGLRYDINRWTYNIDGFAQSKQRSPGT GVNADGSFNGNYITEGTADGQYGDIPGYVTWNVRGGYDFGSQLSNLKLGAGVKNIFDKQYFTRSSDNNSGIYVGTPRTFF VQASVGF
Specific function: FecA is the outer membrane receptor protein in the Fe(3+) dicitrate transport system [H]
COG id: COG4772
COG function: function code P; Outer membrane receptor for Fe3+-dicitrate
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1790743, Length=800, Percent_Identity=43.5, Blast_Score=601, Evalue=1e-173, Organism=Escherichia coli, GI1788478, Length=142, Percent_Identity=30.2816901408451, Blast_Score=66, Evalue=9e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR011662 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010917 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF07660 STN; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 87806; Mature: 87806
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: PS01156 TONB_DEPENDENT_REC_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNSTAKNNKSPWLPLALALAVNAAMPMAFAAEAIHIRAQPLGQALSELGQQTSLQVFFS CCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHEEEEEECCHHHHHHHHHCCCCEEEEEEC PDLVAGKQAPAVDGNLSPEQALRQLLQGSGLDYQINEGSVTLSPAPTSAANGPLELGVTD CCEECCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCEEEECCCCCCCCCCCEEECCEE IKVVGDWLGDADAAVVQNHPGARTVIRREAMVEQGAMNVGDVLRRVPGVQVQEANGTGGS EEEEEHHCCCCCCCEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEECCCCCCC DISLNVGVRGLTSRLSPRSTVLIDGVPAAFAPYGQPQLSMAPISSGNLDSIDVVRGAGSV EEEEECCCCHHHHCCCCCCEEEEECCCHHCCCCCCCCEEEECCCCCCCCCEEEEECCCCC RYGPQNVGGVINFVTRAIPEKTTGEIGTTLETSQHGGWKHIDTAFLGGTADNGIGMALLY CCCCHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCEEECCCCCCCCEEEEEE SGVNGNGYRERNNGNDIDDVILKTHWAPTEQDDFSLNFHYYDASADMPGGLTQKQYDDKP ECCCCCCCEECCCCCCHHHHHEEECCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCC FQSDRDYDGFSGRRKDVSFKWIRQIDERTQAEVLTYYSDSFRGSTIAARDQKTLSSFPRS CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEEEEECCCCCCCEEECCCHHHHHHCCCC YYTLGIEPRVSRVFDVGPTTQEVSVGYRYLKEAMHEQSSRLALVNNVPVVTKTSDGHVFQ EEEECCCHHHHHEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEECCCCCEEE DRTGGTEANSVYIDNKIDVGNWTVTPGIRFEHISTDWHDRAVLDTAGKRVPEKNRSIESN CCCCCCCCCEEEECCEEECCCEEECCCEEEEEECCCCCCCHHHHHHCCCCCCCCCCCCCC EPLPALSVMYHLSDAWKLFANYETSFGSLQYFQLGQGGSGDQTANGLEPEKAKTYEIGTR CCCCHHHHHHHHHHHHHEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEECCCC YNDDVWGGEVTLFYIDFDDELQYISNDVGWTNLGATKHQGIEASVHYDMAALDPRLDGLT CCCCCCCCEEEEEEEECCCHHHHHHCCCCCCCCCCCCCCCEEEEEEECHHHCCCCCCCEE ANAGFTYTRATYEGEIPGFKGRDLPFYSRQVATVGLRYDINRWTYNIDGFAQSKQRSPGT ECCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEEEEEECEEEEECCCHHHHCCCCCCC GVNADGSFNGNYITEGTADGQYGDIPGYVTWNVRGGYDFGSQLSNLKLGAGVKNIFDKQY CCCCCCCCCCCEEECCCCCCCCCCCCCEEEEEECCCCCHHHHHCCEEECCCHHHHHHHHH FTRSSDNNSGIYVGTPRTFFVQASVGF HCCCCCCCCCEEEECCCEEEEEEECCC >Mature Secondary Structure MKNSTAKNNKSPWLPLALALAVNAAMPMAFAAEAIHIRAQPLGQALSELGQQTSLQVFFS CCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHEEEEEECCHHHHHHHHHCCCCEEEEEEC PDLVAGKQAPAVDGNLSPEQALRQLLQGSGLDYQINEGSVTLSPAPTSAANGPLELGVTD CCEECCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCEEEECCCCCCCCCCCEEECCEE IKVVGDWLGDADAAVVQNHPGARTVIRREAMVEQGAMNVGDVLRRVPGVQVQEANGTGGS EEEEEHHCCCCCCCEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEECCCCCCC DISLNVGVRGLTSRLSPRSTVLIDGVPAAFAPYGQPQLSMAPISSGNLDSIDVVRGAGSV EEEEECCCCHHHHCCCCCCEEEEECCCHHCCCCCCCCEEEECCCCCCCCCEEEEECCCCC RYGPQNVGGVINFVTRAIPEKTTGEIGTTLETSQHGGWKHIDTAFLGGTADNGIGMALLY CCCCHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCEEECCCCCCCCEEEEEE SGVNGNGYRERNNGNDIDDVILKTHWAPTEQDDFSLNFHYYDASADMPGGLTQKQYDDKP ECCCCCCCEECCCCCCHHHHHEEECCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCC FQSDRDYDGFSGRRKDVSFKWIRQIDERTQAEVLTYYSDSFRGSTIAARDQKTLSSFPRS CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEEEEECCCCCCCEEECCCHHHHHHCCCC YYTLGIEPRVSRVFDVGPTTQEVSVGYRYLKEAMHEQSSRLALVNNVPVVTKTSDGHVFQ EEEECCCHHHHHEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEECCCCCEEE DRTGGTEANSVYIDNKIDVGNWTVTPGIRFEHISTDWHDRAVLDTAGKRVPEKNRSIESN CCCCCCCCCEEEECCEEECCCEEECCCEEEEEECCCCCCCHHHHHHCCCCCCCCCCCCCC EPLPALSVMYHLSDAWKLFANYETSFGSLQYFQLGQGGSGDQTANGLEPEKAKTYEIGTR CCCCHHHHHHHHHHHHHEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEECCCC YNDDVWGGEVTLFYIDFDDELQYISNDVGWTNLGATKHQGIEASVHYDMAALDPRLDGLT CCCCCCCCEEEEEEEECCCHHHHHHCCCCCCCCCCCCCCCEEEEEEECHHHCCCCCCCEE ANAGFTYTRATYEGEIPGFKGRDLPFYSRQVATVGLRYDINRWTYNIDGFAQSKQRSPGT ECCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEEEEEECEEEEECCCHHHHCCCCCCC GVNADGSFNGNYITEGTADGQYGDIPGYVTWNVRGGYDFGSQLSNLKLGAGVKNIFDKQY CCCCCCCCCCCEEECCCCCCCCCCCCCEEEEEECCCCCHHHHHCCEEECCCHHHHHHHHH FTRSSDNNSGIYVGTPRTFFVQASVGF HCCCCCCCCCEEEECCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2836368; 7610040; 9278503; 2254251; 2651410 [H]