| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is fecR [H]
Identifier: 77460007
GI number: 77460007
Start: 4283783
End: 4284766
Strand: Reverse
Name: fecR [H]
Synonym: Pfl01_3785
Alternate gene names: 77460007
Gene position: 4284766-4283783 (Counterclockwise)
Preceding gene: 77460008
Following gene: 77460006
Centisome position: 66.55
GC content: 64.84
Gene sequence:
>984_bases ATGATGGATACTCGTGATTGCGCGTGCGGGCAAACAACGGTGCGCGATGACGCGGCACGCTGGTTTGTGCGTTTGCAGGA GCCGGCCGTCAGTGCCGACGAACAGCAGCGCTTCGATGCGTGGCTGAACGAACATCCCCAGCACCGTGACGAATTCCAGT TGCTGCAAGGCTTGTGGTCAGCGGCGGATCTGCTGCCGGCGCCACGGCTTAAAGCTTTGTGCGAAACCCCGCCGGCGCGG CGCGAGCGCCGACCGTTGTTGCGTTATGCCGTGGCGGCCAGCGTGGTCGCGGTGGCGCTCGGGCTCGGCCTGTTCAGCGG CCTGAATCACCCGCAAGGTTACAGCGCCGAATTCGCCACCGCGTTGGGCGAGCGCAAGCATGTGGCGCTGCCGGACGGCT CGATGATCGACCTCAACAGCCGCAGCCGTTTGCAGGTGCGTTTCGAAAAGGATCGGCGGCTCATCGAGCTGACCGAAGGC GAAGCGATGTTCAGCGTCGAGCACGACACGTCCCGCCCGTTCGTGGTCGAGGCCGGCAGCGGCAAGGTCACGGTCACCGG CACCCGTTTCGATGTGCGGCGCGACGTGACCCAGACCCGGGTCGCGGTGGAGCAGGGCACGGTCAAGGTGCAGGGCCGGG ATGCGGCCGATGCCGATTTCATCAGCCTCACTGCCGGCCTCGGCACGCGGGTCGATGCCCAGGGCAAAGTGGCGCCAGCC TACGCGGTCACCCCGGCGGAACTGACGGCCTGGCGCAGCGGCAGACTGGTGTTCAACAACGCCAGCCTCAGCGAAGTTGT CGAGGAAGTGTCGCGTTATCGCGACAAGCCGCTGAAAGTCGCCAACCCGGCCGTGGCCAATTTGCGCCTGACCAGCGTGT TCAAATCCGACAACACCGATGCCTTGCTCAAGGCCTTGCCGAGCATCCTTCCGGTGGCCGTGCGCACCCTTGCCGACGGC AGCCAGGAAATAATTTCAAAATAA
Upstream 100 bases:
>100_bases AAGTATATGATCCGCACCCTGCGGCATCTGCGTGATCGCCTGGACGGGGCGCAATCATGAGCCGTGGCGTCTTTTCATCC CCAGCCAAACAGGACATTCC
Downstream 100 bases:
>100_bases AATTCAGGTTTTTTTCGAGTTCGTCGTCTTCCTGTTCAACTGCAACTGGTTTGCATTAACAGCCGCACACTCTTGCGATC CACAGGACTCCGTTCGACGT
Product: putative FecR
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 327; Mature: 327
Protein sequence:
>327_residues MMDTRDCACGQTTVRDDAARWFVRLQEPAVSADEQQRFDAWLNEHPQHRDEFQLLQGLWSAADLLPAPRLKALCETPPAR RERRPLLRYAVAASVVAVALGLGLFSGLNHPQGYSAEFATALGERKHVALPDGSMIDLNSRSRLQVRFEKDRRLIELTEG EAMFSVEHDTSRPFVVEAGSGKVTVTGTRFDVRRDVTQTRVAVEQGTVKVQGRDAADADFISLTAGLGTRVDAQGKVAPA YAVTPAELTAWRSGRLVFNNASLSEVVEEVSRYRDKPLKVANPAVANLRLTSVFKSDNTDALLKALPSILPVAVRTLADG SQEIISK
Sequences:
>Translated_327_residues MMDTRDCACGQTTVRDDAARWFVRLQEPAVSADEQQRFDAWLNEHPQHRDEFQLLQGLWSAADLLPAPRLKALCETPPAR RERRPLLRYAVAASVVAVALGLGLFSGLNHPQGYSAEFATALGERKHVALPDGSMIDLNSRSRLQVRFEKDRRLIELTEG EAMFSVEHDTSRPFVVEAGSGKVTVTGTRFDVRRDVTQTRVAVEQGTVKVQGRDAADADFISLTAGLGTRVDAQGKVAPA YAVTPAELTAWRSGRLVFNNASLSEVVEEVSRYRDKPLKVANPAVANLRLTSVFKSDNTDALLKALPSILPVAVRTLADG SQEIISK >Mature_327_residues MMDTRDCACGQTTVRDDAARWFVRLQEPAVSADEQQRFDAWLNEHPQHRDEFQLLQGLWSAADLLPAPRLKALCETPPAR RERRPLLRYAVAASVVAVALGLGLFSGLNHPQGYSAEFATALGERKHVALPDGSMIDLNSRSRLQVRFEKDRRLIELTEG EAMFSVEHDTSRPFVVEAGSGKVTVTGTRFDVRRDVTQTRVAVEQGTVKVQGRDAADADFISLTAGLGTRVDAQGKVAPA YAVTPAELTAWRSGRLVFNNASLSEVVEEVSRYRDKPLKVANPAVANLRLTSVFKSDNTDALLKALPSILPVAVRTLADG SQEIISK
Specific function: Regulation of iron dicitrate transport. In the absence of citrate fecR inactivates fecI. FecR is probably a sensor that recognizes iron dicitrate in the periplasm [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790745, Length=303, Percent_Identity=28.7128712871287, Blast_Score=103, Evalue=1e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006860 - InterPro: IPR012373 [H]
Pfam domain/function: PF04773 FecR [H]
EC number: NA
Molecular weight: Translated: 35876; Mature: 35876
Theoretical pI: Translated: 7.56; Mature: 7.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMDTRDCACGQTTVRDDAARWFVRLQEPAVSADEQQRFDAWLNEHPQHRDEFQLLQGLWS CCCCCCCCCCCCHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHH AADLLPAPRLKALCETPPARRERRPLLRYAVAASVVAVALGLGLFSGLNHPQGYSAEFAT HHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH ALGERKHVALPDGSMIDLNSRSRLQVRFEKDRRLIELTEGEAMFSVEHDTSRPFVVEAGS HHCCCCEEECCCCCEEECCCCCEEEEEEECCCEEEEEECCCEEEEEECCCCCCEEEECCC GKVTVTGTRFDVRRDVTQTRVAVEQGTVKVQGRDAADADFISLTAGLGTRVDAQGKVAPA CEEEEEECHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCE YAVTPAELTAWRSGRLVFNNASLSEVVEEVSRYRDKPLKVANPAVANLRLTSVFKSDNTD EEECCHHHHHCCCCCEEEECCCHHHHHHHHHHHCCCCCEECCCCHHCEEEEEEECCCCHH ALLKALPSILPVAVRTLADGSQEIISK HHHHHHHHHHHHHHHHHCCCHHHHHCC >Mature Secondary Structure MMDTRDCACGQTTVRDDAARWFVRLQEPAVSADEQQRFDAWLNEHPQHRDEFQLLQGLWS CCCCCCCCCCCCHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHH AADLLPAPRLKALCETPPARRERRPLLRYAVAASVVAVALGLGLFSGLNHPQGYSAEFAT HHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH ALGERKHVALPDGSMIDLNSRSRLQVRFEKDRRLIELTEGEAMFSVEHDTSRPFVVEAGS HHCCCCEEECCCCCEEECCCCCEEEEEEECCCEEEEEECCCEEEEEECCCCCCEEEECCC GKVTVTGTRFDVRRDVTQTRVAVEQGTVKVQGRDAADADFISLTAGLGTRVDAQGKVAPA CEEEEEECHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCE YAVTPAELTAWRSGRLVFNNASLSEVVEEVSRYRDKPLKVANPAVANLRLTSVFKSDNTD EEECCHHHHHCCCCCEEEECCCHHHHHHHHHHHCCCCCEECCCCHHCEEEEEEECCCCHH ALLKALPSILPVAVRTLADGSQEIISK HHHHHHHHHHHHHHHHHCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2254251; 7610040; 9278503 [H]