| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is pld1 [H]
Identifier: 77459745
GI number: 77459745
Start: 4002034
End: 4003056
Strand: Reverse
Name: pld1 [H]
Synonym: Pfl01_3523
Alternate gene names: 77459745
Gene position: 4003056-4002034 (Counterclockwise)
Preceding gene: 77459748
Following gene: 77459744
Centisome position: 62.17
GC content: 61.88
Gene sequence:
>1023_bases ATGAGCTTGAAAGACAAACTCCCCGGCCAACTCGGCTTCGGCACCGCGCCGCTGGGCAACATGTTCCGCGCCATTCCTGA AGAAGAAGCCCAAGCTACCGTGCACGCGGCGTGGGAGGCCGGTGTGCGTTACTTCGACACCGCACCGTTCTACGGTTCGG GCCTCTCGGAAATCCGCCTCGGCGAAGCACTGTCCCGCTACCAGCGCGACGACTATGTGCTGAGCACCAAGGTTGGCCGG GTGATTCTCGATGAAGTCGAAGACGCTGCCGCCCGGGATCTGGGCGAGAAAAGCGGGGTGTTCGAACACGGCCGCCCGAA CAAGATCGTCAACGACTACAGCGCTGACGCAACGCTGCGTTCGATCGAAGACAGCCTCAAGCGTCTGAAAACCGATCGCC TCGACATCGTCTGGGTCCACGATATCGCTCAGGATTTCTACGGCGATCAATGGCTCGAGTACTTCAATCAGGCCCGTACC GGCGCCTTCAAAGTCCTGACGCGTCTGCGTGAAGAAGGCGTGATCAAGGGCTGGGGCCTGGGCGTGAACAAGGTCGAACC GTGCGAGTTGACGCTGGACCTGACCGAGGCGCAGCCTGACGGCTTCCTGTTGGCCGGCCGCTACACCTTGCTCGACCACG ACCGCGCCTTGCAGCGTTTGATGGATTCGGCGCGTGCGCAGAACGTAGGAATCGTGGTCGGCGGTCCCTACAGCTCGGGG ATCCTGGCCGGCGGTGCGCACTTCGAATACCAGAAAGCCAGTCCTGAAATCGTTGCCAGGGTCGAGCAGATCAAACGCAT CGCCGCGGCTTACGGCGTCGATGTCAAAGCGGCTGCACTACAATTCTCGCTGGCCAATCCGGCCGTGGCGGCAGTGATTC CCGGCGCGAGCAAACCGGGGCGCATCGCTGAAGATGTGGCGGCGCTGTCGGCGGTCATTCCGGCCGGTTTCTGGCAGGCC ATGCGTGAAGCGAAACTGGTGTCCGAGCGTGCACCATTACCCATCGACGAGGTGAAAGCATGA
Upstream 100 bases:
>100_bases GGGACTCAAGTGCTGCGGATTATGTCTTGGACGGTCTGAGTGGCGCAATCTAGGATCTGCTCAACGGTCAACACTGACCA CGAATTACGAGGACAGCATC
Downstream 100 bases:
>100_bases AGATCGATCTGAGCGGAAAACTGGCGATTGTCAGCGGCAGCACGGCGGGCATCGGTTTGGGCATCAGCCAGTCGCTGGCC GAGGCGGGCGCCACGGTGGT
Product: aldo/keto reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 340; Mature: 339
Protein sequence:
>340_residues MSLKDKLPGQLGFGTAPLGNMFRAIPEEEAQATVHAAWEAGVRYFDTAPFYGSGLSEIRLGEALSRYQRDDYVLSTKVGR VILDEVEDAAARDLGEKSGVFEHGRPNKIVNDYSADATLRSIEDSLKRLKTDRLDIVWVHDIAQDFYGDQWLEYFNQART GAFKVLTRLREEGVIKGWGLGVNKVEPCELTLDLTEAQPDGFLLAGRYTLLDHDRALQRLMDSARAQNVGIVVGGPYSSG ILAGGAHFEYQKASPEIVARVEQIKRIAAAYGVDVKAAALQFSLANPAVAAVIPGASKPGRIAEDVAALSAVIPAGFWQA MREAKLVSERAPLPIDEVKA
Sequences:
>Translated_340_residues MSLKDKLPGQLGFGTAPLGNMFRAIPEEEAQATVHAAWEAGVRYFDTAPFYGSGLSEIRLGEALSRYQRDDYVLSTKVGR VILDEVEDAAARDLGEKSGVFEHGRPNKIVNDYSADATLRSIEDSLKRLKTDRLDIVWVHDIAQDFYGDQWLEYFNQART GAFKVLTRLREEGVIKGWGLGVNKVEPCELTLDLTEAQPDGFLLAGRYTLLDHDRALQRLMDSARAQNVGIVVGGPYSSG ILAGGAHFEYQKASPEIVARVEQIKRIAAAYGVDVKAAALQFSLANPAVAAVIPGASKPGRIAEDVAALSAVIPAGFWQA MREAKLVSERAPLPIDEVKA >Mature_339_residues SLKDKLPGQLGFGTAPLGNMFRAIPEEEAQATVHAAWEAGVRYFDTAPFYGSGLSEIRLGEALSRYQRDDYVLSTKVGRV ILDEVEDAAARDLGEKSGVFEHGRPNKIVNDYSADATLRSIEDSLKRLKTDRLDIVWVHDIAQDFYGDQWLEYFNQARTG AFKVLTRLREEGVIKGWGLGVNKVEPCELTLDLTEAQPDGFLLAGRYTLLDHDRALQRLMDSARAQNVGIVVGGPYSSGI LAGGAHFEYQKASPEIVARVEQIKRIAAAYGVDVKAAALQFSLANPAVAAVIPGASKPGRIAEDVAALSAVIPAGFWQAM REAKLVSERAPLPIDEVKA
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase family [H]
Homologues:
Organism=Escherichia coli, GI1788070, Length=334, Percent_Identity=24.5508982035928, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI87081735, Length=149, Percent_Identity=30.8724832214765, Blast_Score=62, Evalue=5e-11, Organism=Caenorhabditis elegans, GI212645785, Length=298, Percent_Identity=24.8322147651007, Blast_Score=84, Evalue=8e-17, Organism=Drosophila melanogaster, GI24646155, Length=269, Percent_Identity=28.996282527881, Blast_Score=99, Evalue=5e-21, Organism=Drosophila melanogaster, GI24646159, Length=287, Percent_Identity=27.8745644599303, Blast_Score=94, Evalue=1e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: =1.1.1.107 [H]
Molecular weight: Translated: 37042; Mature: 36911
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLKDKLPGQLGFGTAPLGNMFRAIPEEEAQATVHAAWEAGVRYFDTAPFYGSGLSEIRL CCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHH GEALSRYQRDDYVLSTKVGRVILDEVEDAAARDLGEKSGVFEHGRPNKIVNDYSADATLR HHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCCHHCCCCCHHHHH SIEDSLKRLKTDRLDIVWVHDIAQDFYGDQWLEYFNQARTGAFKVLTRLREEGVIKGWGL HHHHHHHHHHCCCEEEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCC GVNKVEPCELTLDLTEAQPDGFLLAGRYTLLDHDRALQRLMDSARAQNVGIVVGGPYSSG CCCCCCCCEEEEEEECCCCCCEEEECEEEEHHHHHHHHHHHHHHHHCCCCEEEECCCCCC ILAGGAHFEYQKASPEIVARVEQIKRIAAAYGVDVKAAALQFSLANPAVAAVIPGASKPG EEECCCCCEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHEEECCCCCEEEEECCCCCCC RIAEDVAALSAVIPAGFWQAMREAKLVSERAPLPIDEVKA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCC >Mature Secondary Structure SLKDKLPGQLGFGTAPLGNMFRAIPEEEAQATVHAAWEAGVRYFDTAPFYGSGLSEIRL CCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHH GEALSRYQRDDYVLSTKVGRVILDEVEDAAARDLGEKSGVFEHGRPNKIVNDYSADATLR HHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCCHHCCCCCHHHHH SIEDSLKRLKTDRLDIVWVHDIAQDFYGDQWLEYFNQARTGAFKVLTRLREEGVIKGWGL HHHHHHHHHHCCCEEEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCC GVNKVEPCELTLDLTEAQPDGFLLAGRYTLLDHDRALQRLMDSARAQNVGIVVGGPYSSG CCCCCCCCEEEEEEECCCCCCEEEECEEEEHHHHHHHHHHHHHHHHCCCCEEEECCCCCC ILAGGAHFEYQKASPEIVARVEQIKRIAAAYGVDVKAAALQFSLANPAVAAVIPGASKPG EEECCCCCEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHEEECCCCCEEEEECCCCCCC RIAEDVAALSAVIPAGFWQAMREAKLVSERAPLPIDEVKA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA