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The map label for this gene is fccB [H]

Identifier: 77459680

GI number: 77459680

Start: 3943084

End: 3944328

Strand: Reverse

Name: fccB [H]

Synonym: Pfl01_3458

Alternate gene names: 77459680

Gene position: 3944328-3943084 (Counterclockwise)

Preceding gene: 77459681

Following gene: 77459679

Centisome position: 61.26

GC content: 62.73

Gene sequence:

>1245_bases
ATGAACGATCAACACTGGGGCCCATCCATCAGTGCGGACATCGTGGTCATCGGCGGCGGCACTGCCGGCATCGGTTTTGT
CGCGAGCCTGCTCAAGCGCGATCCCGGCCTGAAAATCACGGTGATCGAGCCGAGCACCCTGCATTACTACCAACCGGCGT
GGACGCTGGTCGGCGGTGGCGCCTATGACGCCAAAGACACCGCCCGACCGATGAACAAGGTGATGCCGCGCCAGGCCACC
TGGATTCAGGCCGCCGTGACCGGCATCGACCCCGACCAGCGCCGTCTCACCCTCAACGATCAACGCACCATCACCTATCA
GAACCTGATCGTCTGCCCCGGCCTGCGCCTGGCGTGGGAGAAGATCGAAGGCCTGCAGGACAGTCTCGGCCAGCACGGCG
TCACCTCCAACTACAGCTATCAGCACGCGCAATACACCTGGGATCAGGTGCAGAAACTGGGCGGCGGCAAAGCGCTGTTC
ACCCAGCCGCCGATCCCGATCAAGTGTGCCGGCGCGCCGCAAAAGGCGCTGTACTTGTCCTGCGATCACTGGCTCAAGCG
CAACGTGCTGAGTAAGGTCGATGTCGAGTTCAATCTGGCCGGTGCCGCGCTGTTCGGCGTGCCGACCTTCGTACCGCCGC
TGATGAAGTACATCGAGAAATACAACGCGCGGCTGGCATTCAATTCCAATCTGGTGAAGGTCGACGGCCCGGCGAAAACT
GCCTGGTTCGACGTCAAGGATGCGGACGGCAACGTTACCCGTCAGGCCAAGACTTTCGATTTGTTGCACGTCGTCCCGCC
GCAGGTTTCACCGGATTTCATCGCACAAAGTCCGCTGGCCGACGCCGCCGGCTGGTGCGAGGTCAACCCGCATACGCTGC
AACACCCGCGCTATCCGGAAGTGTTTGCCTTGGGCGATATCTGCGGCACCACCCATGCGAAAACCGCCGCGGCAGTGCGC
AAGCAGGTCGTGGTGGTGGCGGAAAACCTGCTGGCGGTGCGCAAGGAACTGGCGCTGCCGTTGAAGTACGACGGCTACGG
TTCCTGCCCGCTGACGGTGGAGAAGGGCAAGGTGATCCTCGCCGAGTTCGGCTATGGCGGAAAACTGCTGCCAACCTTTC
CCCTCGACCCGACCGTGCCGCGCCGCTCCGCGTGGTGGCTGAAGGCGACGTTGCTGCCGTGGTTCTACTGGAACGGCATG
CTCAAGGGCCGCGAATGGCTGACAAGTCTGTCCAGGGTCGACTGA

Upstream 100 bases:

>100_bases
AGGTGATGAAAACCCTCTCGGGACTCTACTGCGGAGCCGTGCTCAAAAGCTGGGCGCAATAGACCCGGCTATCCTTGCGT
GCAGCCATAAGGAACAAACA

Downstream 100 bases:

>100_bases
GAACACACTATGTTGTTGGCTAGTCTGTTTGGCGTGGTGATGGGGTTGATCCTCGGTCTGACCGGGGCCGGCGGCGGGAT
TCTCGCCGTACCGGCGCTGG

Product: hypothetical protein

Products: NA

Alternate protein names: FCSD; Flavocytochrome c flavoprotein subunit; FC [H]

Number of amino acids: Translated: 414; Mature: 414

Protein sequence:

>414_residues
MNDQHWGPSISADIVVIGGGTAGIGFVASLLKRDPGLKITVIEPSTLHYYQPAWTLVGGGAYDAKDTARPMNKVMPRQAT
WIQAAVTGIDPDQRRLTLNDQRTITYQNLIVCPGLRLAWEKIEGLQDSLGQHGVTSNYSYQHAQYTWDQVQKLGGGKALF
TQPPIPIKCAGAPQKALYLSCDHWLKRNVLSKVDVEFNLAGAALFGVPTFVPPLMKYIEKYNARLAFNSNLVKVDGPAKT
AWFDVKDADGNVTRQAKTFDLLHVVPPQVSPDFIAQSPLADAAGWCEVNPHTLQHPRYPEVFALGDICGTTHAKTAAAVR
KQVVVVAENLLAVRKELALPLKYDGYGSCPLTVEKGKVILAEFGYGGKLLPTFPLDPTVPRRSAWWLKATLLPWFYWNGM
LKGREWLTSLSRVD

Sequences:

>Translated_414_residues
MNDQHWGPSISADIVVIGGGTAGIGFVASLLKRDPGLKITVIEPSTLHYYQPAWTLVGGGAYDAKDTARPMNKVMPRQAT
WIQAAVTGIDPDQRRLTLNDQRTITYQNLIVCPGLRLAWEKIEGLQDSLGQHGVTSNYSYQHAQYTWDQVQKLGGGKALF
TQPPIPIKCAGAPQKALYLSCDHWLKRNVLSKVDVEFNLAGAALFGVPTFVPPLMKYIEKYNARLAFNSNLVKVDGPAKT
AWFDVKDADGNVTRQAKTFDLLHVVPPQVSPDFIAQSPLADAAGWCEVNPHTLQHPRYPEVFALGDICGTTHAKTAAAVR
KQVVVVAENLLAVRKELALPLKYDGYGSCPLTVEKGKVILAEFGYGGKLLPTFPLDPTVPRRSAWWLKATLLPWFYWNGM
LKGREWLTSLSRVD
>Mature_414_residues
MNDQHWGPSISADIVVIGGGTAGIGFVASLLKRDPGLKITVIEPSTLHYYQPAWTLVGGGAYDAKDTARPMNKVMPRQAT
WIQAAVTGIDPDQRRLTLNDQRTITYQNLIVCPGLRLAWEKIEGLQDSLGQHGVTSNYSYQHAQYTWDQVQKLGGGKALF
TQPPIPIKCAGAPQKALYLSCDHWLKRNVLSKVDVEFNLAGAALFGVPTFVPPLMKYIEKYNARLAFNSNLVKVDGPAKT
AWFDVKDADGNVTRQAKTFDLLHVVPPQVSPDFIAQSPLADAAGWCEVNPHTLQHPRYPEVFALGDICGTTHAKTAAAVR
KQVVVVAENLLAVRKELALPLKYDGYGSCPLTVEKGKVILAEFGYGGKLLPTFPLDPTVPRRSAWWLKATLLPWFYWNGM
LKGREWLTSLSRVD

Specific function: Unknown

COG id: COG0446

COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI10864011, Length=403, Percent_Identity=39.7022332506204, Blast_Score=306, Evalue=3e-83,
Organism=Caenorhabditis elegans, GI17539680, Length=427, Percent_Identity=30.4449648711944, Blast_Score=222, Evalue=3e-58,
Organism=Caenorhabditis elegans, GI115534373, Length=333, Percent_Identity=36.6366366366366, Blast_Score=220, Evalue=1e-57,
Organism=Drosophila melanogaster, GI24657386, Length=382, Percent_Identity=36.3874345549738, Blast_Score=241, Evalue=7e-64,
Organism=Drosophila melanogaster, GI24657391, Length=382, Percent_Identity=36.3874345549738, Blast_Score=241, Evalue=7e-64,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016156
- InterPro:   IPR013027
- InterPro:   IPR015323
- InterPro:   IPR015904
- InterPro:   IPR006311 [H]

Pfam domain/function: PF09242 FCSD-flav_bind; PF07992 Pyr_redox_2 [H]

EC number: NA

Molecular weight: Translated: 45645; Mature: 45645

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDQHWGPSISADIVVIGGGTAGIGFVASLLKRDPGLKITVIEPSTLHYYQPAWTLVGGG
CCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCCEEEEECCCEEEEECCCEEEEECC
AYDAKDTARPMNKVMPRQATWIQAAVTGIDPDQRRLTLNDQRTITYQNLIVCPGLRLAWE
CCCCHHHHHHHHHHCCCCHHEEEEEEECCCCCCCEEEECCCEEEEECCEEECCCHHHHHH
KIEGLQDSLGQHGVTSNYSYQHAQYTWDQVQKLGGGKALFTQPPIPIKCAGAPQKALYLS
HHHHHHHHHCCCCCCCCCCCCHHHCCHHHHHHCCCCCEEEECCCCCEEECCCCCCEEEEE
CDHWLKRNVLSKVDVEFNLAGAALFGVPTFVPPLMKYIEKYNARLAFNSNLVKVDGPAKT
HHHHHHHHHHHHCCEEEEECCHHHHCCHHHHHHHHHHHHHHCCEEEECCCEEEECCCCCE
AWFDVKDADGNVTRQAKTFDLLHVVPPQVSPDFIAQSPLADAAGWCEVNPHTLQHPRYPE
EEEEEECCCCCCEECCEEEEEEEECCCCCCHHHHHCCCCCCCCCEEECCCCCCCCCCCCC
VFALGDICGTTHAKTAAAVRKQVVVVAENLLAVRKELALPLKYDGYGSCPLTVEKGKVIL
EEEECCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEEECCCEEE
AEFGYGGKLLPTFPLDPTVPRRSAWWLKATLLPWFYWNGMLKGREWLTSLSRVD
EEECCCCEECCCCCCCCCCCCCCCEEEHHHHHHHHHHCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MNDQHWGPSISADIVVIGGGTAGIGFVASLLKRDPGLKITVIEPSTLHYYQPAWTLVGGG
CCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCCEEEEECCCEEEEECCCEEEEECC
AYDAKDTARPMNKVMPRQATWIQAAVTGIDPDQRRLTLNDQRTITYQNLIVCPGLRLAWE
CCCCHHHHHHHHHHCCCCHHEEEEEEECCCCCCCEEEECCCEEEEECCEEECCCHHHHHH
KIEGLQDSLGQHGVTSNYSYQHAQYTWDQVQKLGGGKALFTQPPIPIKCAGAPQKALYLS
HHHHHHHHHCCCCCCCCCCCCHHHCCHHHHHHCCCCCEEEECCCCCEEECCCCCCEEEEE
CDHWLKRNVLSKVDVEFNLAGAALFGVPTFVPPLMKYIEKYNARLAFNSNLVKVDGPAKT
HHHHHHHHHHHHCCEEEEECCHHHHCCHHHHHHHHHHHHHHCCEEEECCCEEEECCCCCE
AWFDVKDADGNVTRQAKTFDLLHVVPPQVSPDFIAQSPLADAAGWCEVNPHTLQHPRYPE
EEEEEECCCCCCEECCEEEEEEEECCCCCCHHHHHCCCCCCCCCEEECCCCCCCCCCCCC
VFALGDICGTTHAKTAAAVRKQVVVVAENLLAVRKELALPLKYDGYGSCPLTVEKGKVIL
EEEECCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEEECCCEEE
AEFGYGGKLLPTFPLDPTVPRRSAWWLKATLLPWFYWNGMLKGREWLTSLSRVD
EEECCCCEECCCCCCCCCCCCCCCEEEHHHHHHHHHHCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8390993; 1649169; 7939681 [H]